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Os08g0154900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Oxysterol-binding protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.68 (0.0208) R2 : 0.767
β1 : -1.36 (0.0763) R2dD : 0.168 R2D : 0.155
β2 : 1.88 (0.0544) R2dC : 0.612 R2C : 0.6
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0132 (0.0445) R2dN8 : 6.01e-05 R2N8 : -0.00415
σ : 0.392
deviance : 70.01
__
_____
C
peak time of C : 6.24
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.41 0.371 7.66 -1.34 1.86 -0.73 -0.112 -0.576 0.0162 6.86 12.67 83 -- --
62.98 0.37 7.67 -1.35 1.86 -0.684 -0.177 -- 0.0167 6.84 12.06 83 -- --
62.44 0.368 7.66 -1.34 1.86 -0.734 -- -0.597 0.0168 6.87 12.59 83 -- --
63.07 0.37 7.67 -1.36 1.86 -0.683 -- -- 0.0143 6.84 12.05 83 -- --
117.06 0.504 7.67 -1.21 -- -1.93 -- 0.106 0.201 -- -23.96 730 -- --
69.91 0.392 7.68 -1.36 1.88 -- -0.201 -- -0.0139 6.24 -- -- -- --
70.01 0.392 7.68 -1.36 1.88 -- -- -- -0.0132 6.24 -- -- -- --
117.06 0.504 7.67 -1.21 -- -1.94 -- -- 0.214 -- -3.072 730 -- --
110.57 0.49 7.64 -- 1.77 -0.635 -- -- 0.175 6.92 10 186 -- --
253 0.743 7.71 -1.31 -- -- -- -- 0.0279 -- -- -- -- --
118.64 0.51 7.64 -- 1.86 -- -- -- 0.138 6.27 -- -- -- --
155.5 0.581 7.64 -- -- -1.98 -- -- 0.353 -- -3.914 734 -- --
298.07 0.806 7.68 -- -- -- -- -- 0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 57.01 atmosphere 995.0 90 > th dose dependent rect. 4 18
2 57.10 radiation 40.0 90 < th dose independent rect. 3 22
5 57.41 atmosphere 995.0 270 > th dose dependent rect. 2 19
7 57.57 radiation 40.0 90 < th dose independent rect. 4 19
8 57.59 radiation 40.0 90 < th dose dependent rect. 3 22
9 57.61 radiation 40.0 10 < th dose independent rect. 4 20
14 57.82 temperature 15.0 270 > th dose dependent rect. 22 4
15 57.82 temperature 15.0 90 > th dose dependent rect. 22 6
22 57.98 radiation 40.0 10 < th dose dependent rect. 5 19
32 58.17 radiation 40.0 270 < th dose dependent rect. 2 9
33 58.19 temperature 10.0 30 > th dose dependent rect. 9 19
35 58.22 radiation 40.0 270 < th dose dependent rect. 2 11
38 58.26 atmosphere 1000.0 90 > th dose independent rect. 4 19
42 58.28 radiation 40.0 10 < th dose independent rect. 5 17
53 58.47 radiation 40.0 90 < th dose dependent rect. 4 9
54 58.52 radiation 20.0 270 < th dose independent rect. 2 9
65 58.67 temperature 20.0 90 > th dose independent rect. 22 6
68 58.68 radiation 40.0 90 < th dose dependent rect. 4 7
71 58.70 atmosphere 1000.0 270 > th dose independent rect. 2 20
80 58.79 radiation 30.0 90 < th dose independent rect. 4 7
102 58.91 atmosphere 1015.0 30 < th dose dependent rect. 9 19
109 58.95 temperature 20.0 270 > th dose independent rect. 23 2
116 58.98 temperature 20.0 30 > th dose independent rect. 9 19
130 59.14 radiation 20.0 270 < th dose independent rect. 2 11
167 59.34 radiation 40.0 10 < th dose dependent rect. 5 17
172 59.38 atmosphere 1000.0 10 > th dose independent rect. 5 17
216 59.64 atmosphere 1000.0 30 > th dose dependent rect. 4 5
217 59.65 radiation 40.0 90 < th dose independent rect. 4 9
234 59.73 radiation 20.0 90 < th dose independent rect. 4 5
255 59.80 atmosphere 1015.0 270 < th dose dependent rect. 7 8
266 59.85 radiation 40.0 10 < th dose dependent rect. 5 9
274 59.89 radiation 40.0 90 < th dose independent rect. 4 11
287 59.95 radiation 40.0 90 < th dose dependent rect. 4 5
289 59.96 atmosphere 1015.0 270 < th dose independent rect. 23 2
303 59.98 atmosphere 995.0 270 > th dose dependent rect. 2 7
316 60.01 atmosphere 1000.0 270 > th dose dependent rect. 4 2
320 60.02 precipitation 0.1 30 < th dose independent rect. 9 19
323 60.02 precipitation 0.1 30 < th dose dependent rect. 9 19
324 60.03 radiation 20.0 10 < th dose independent rect. 5 4
345 60.09 atmosphere 1015.0 30 < th dose independent rect. 9 19
347 60.09 radiation 40.0 10 < th dose dependent rect. 3 23
359 60.16 wind 5.0 30 < th dose independent rect. 4 5
367 60.18 atmosphere 1015.0 10 < th dose dependent rect. 9 7
378 60.20 atmosphere 995.0 90 > th dose dependent rect. 4 7
388 60.24 precipitation 0.1 270 < th dose independent rect. 23 2
392 60.24 precipitation 0.1 270 < th dose independent rect. 6 21
393 60.24 precipitation 0.1 270 < th dose dependent rect. 23 2
396 60.24 precipitation 0.1 270 < th dose dependent rect. 6 21
397 60.25 wind 9.0 270 < th dose independent rect. 23 2
398 60.25 temperature 10.0 270 > th dose independent rect. 23 2
399 60.25 temperature 30.0 270 < th dose independent rect. 23 2
400 60.25 humidity 50.0 270 > th dose independent rect. 23 2
403 60.25 atmosphere 995.0 270 > th dose independent rect. 23 2
404 60.25 radiation 1.0 270 < th dose independent rect. 23 2
412 60.25 temperature 10.0 270 > th dose independent rect. 1 22
413 60.25 radiation 1.0 270 < th dose dependent rect. 23 2
435 60.29 humidity 60.0 90 > th dose dependent rect. 4 11
447 60.33 atmosphere 1015.0 270 < th dose independent rect. 22 4
461 60.35 humidity 50.0 90 > th dose dependent rect. 4 5
466 60.37 wind 9.0 30 < th dose independent rect. 9 19
473 60.38 temperature 10.0 30 > th dose independent rect. 4 5
475 60.38 temperature 30.0 30 < th dose independent rect. 4 5
476 60.38 humidity 50.0 30 > th dose independent rect. 4 5
478 60.38 atmosphere 995.0 30 > th dose independent rect. 4 5
479 60.38 atmosphere 1015.0 30 < th dose independent rect. 4 5
480 60.38 temperature 10.0 30 > th dose independent rect. 9 19
490 60.40 precipitation 0.1 30 < th dose independent rect. 4 5
492 60.40 precipitation 0.1 30 < th dose dependent rect. 4 5
510 60.45 radiation 40.0 10 < th dose dependent rect. 5 4
518 60.47 wind 9.0 270 < th dose dependent rect. 23 2
538 60.50 radiation 40.0 10 < th dose dependent rect. 5 7
539 60.51 precipitation 0.1 270 < th dose independent rect. 22 4
540 60.51 temperature 10.0 1440 > th dose independent rect. 5 5
543 60.51 atmosphere 995.0 1440 > th dose independent rect. 5 5
544 60.51 atmosphere 1015.0 1440 < th dose independent rect. 5 5
545 60.51 temperature 10.0 1440 > th dose independent rect. 10 19
551 60.51 precipitation 0.1 270 < th dose dependent rect. 22 4
558 60.52 humidity 60.0 90 > th dose dependent rect. 4 19
564 60.54 wind 5.0 270 < th dose independent rect. 3 3
583 60.57 wind 9.0 270 < th dose independent rect. 22 4
584 60.57 temperature 10.0 270 > th dose independent rect. 22 4
585 60.57 temperature 30.0 270 < th dose independent rect. 22 4
586 60.57 humidity 50.0 270 > th dose independent rect. 22 4
589 60.57 atmosphere 995.0 270 > th dose independent rect. 22 4
590 60.57 radiation 1.0 270 < th dose independent rect. 22 4
596 60.57 temperature 10.0 270 > th dose independent rect. 2 20
597 60.57 radiation 1.0 270 < th dose dependent rect. 22 4
617 60.60 wind 9.0 10 < th dose dependent rect. 5 4
626 60.63 radiation 1.0 270 < th dose independent rect. 4 2
631 60.63 wind 9.0 90 < th dose dependent rect. 4 5
641 60.64 humidity 50.0 90 > th dose dependent rect. 4 7
708 60.73 atmosphere 1005.0 270 > th dose independent rect. 3 5
721 60.74 humidity 50.0 270 > th dose dependent rect. 23 2
739 60.79 wind 9.0 270 < th dose independent rect. 6 21
752 60.81 temperature 10.0 270 > th dose dependent rect. 22 15
755 60.82 precipitation 0.1 270 < th dose independent rect. 3 3
757 60.82 precipitation 0.1 270 < th dose dependent rect. 3 3
760 60.83 atmosphere 1005.0 270 > th dose independent rect. 4 2
762 60.83 temperature 10.0 270 > th dose independent rect. 3 3
764 60.83 temperature 30.0 270 < th dose independent rect. 3 3
765 60.83 humidity 50.0 270 > th dose independent rect. 3 3
768 60.83 atmosphere 995.0 270 > th dose independent rect. 3 3
769 60.83 atmosphere 1015.0 270 < th dose independent rect. 3 3
770 60.83 radiation 20.0 270 < th dose independent rect. 3 3
774 60.83 temperature 10.0 270 > th dose independent rect. 6 21
775 60.83 radiation 20.0 270 < th dose dependent rect. 3 3
789 60.85 humidity 60.0 90 > th dose dependent rect. 4 13
802 60.87 wind 9.0 270 < th dose independent rect. 1 22
817 60.89 wind 5.0 270 < th dose independent rect. 4 1
819 60.89 wind 9.0 270 < th dose independent rect. 2 20
835 60.92 atmosphere 1005.0 10 > th dose independent rect. 5 4
852 60.94 humidity 50.0 10 > th dose dependent rect. 5 4
907 61.01 wind 1.0 270 > th dose independent rect. 22 4
910 61.01 humidity 50.0 270 > th dose dependent rect. 3 3
927 61.03 radiation 40.0 270 < th dose independent rect. 11 11
937 61.04 humidity 50.0 270 > th dose dependent rect. 4 1
977 61.08 temperature 10.0 270 > th dose independent rect. 4 1
979 61.08 temperature 25.0 270 < th dose independent rect. 4 1
981 61.08 humidity 50.0 270 > th dose independent rect. 4 1
984 61.08 atmosphere 995.0 270 > th dose independent rect. 4 1
985 61.08 atmosphere 1010.0 270 < th dose independent rect. 4 1
987 61.08 radiation 20.0 270 < th dose independent rect. 4 1
996 61.08 temperature 10.0 270 > th dose independent rect. 5 23