Os10g0554100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Oxysterol-binding protein family protein.
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Os10g0554100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Oxysterol-binding protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.1 | 0.294 | 8.88 | -0.0799 | 0.668 | 0.918 | -1.03 | 2.26 | 0.0848 | 3.87 | 29.43 | 42 | -- | -- |
| 44.4 | 0.31 | 8.84 | 0.296 | 0.699 | 0.925 | -0.437 | -- | 0.153 | 3.97 | 32.18 | 24 | -- | -- |
| 41.73 | 0.303 | 8.86 | 0.0495 | 0.694 | 0.857 | -- | 1.47 | 0.114 | 3.96 | 29.43 | 42 | -- | -- |
| 44.58 | 0.313 | 8.84 | 0.292 | 0.699 | 1.03 | -- | -- | 0.154 | 3.92 | 51.13 | 16 | -- | -- |
| 60.38 | 0.362 | 8.86 | 0.177 | -- | 1.72 | -- | 2.02 | 0.193 | -- | 35.47 | 7 | -- | -- |
| 54.71 | 0.347 | 8.87 | 0.0918 | 0.974 | -- | -0.0837 | -- | 0.00944 | 3.45 | -- | -- | -- | -- |
| 54.74 | 0.346 | 8.87 | 0.0933 | 0.973 | -- | -- | -- | 0.00994 | 3.44 | -- | -- | -- | -- |
| 63.27 | 0.37 | 8.82 | 0.463 | -- | 1.78 | -- | -- | 0.274 | -- | 39.6 | 27 | -- | -- |
| 46.61 | 0.32 | 8.85 | -- | 0.74 | 0.887 | -- | -- | 0.105 | 3.83 | 56.65 | 16 | -- | -- |
| 107.86 | 0.485 | 8.87 | 0.134 | -- | -- | -- | -- | 0.0357 | -- | -- | -- | -- | -- |
| 54.97 | 0.347 | 8.88 | -- | 0.975 | -- | -- | -- | -0.000453 | 3.44 | -- | -- | -- | -- |
| 68.57 | 0.386 | 8.84 | -- | -- | 1.63 | -- | -- | 0.205 | -- | 67.17 | 27 | -- | -- |
| 108.34 | 0.486 | 8.88 | -- | -- | -- | -- | -- | 0.0208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.02 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 7 | 37.46 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 14 | 38.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 15 | 38.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 16 | 38.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 18 | 38.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 22 | 38.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 44 | 38.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 50 | 38.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 52 | 38.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 56 | 38.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 58 | 39.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 63 | 39.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 65 | 39.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 69 | 39.16 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 73 | 39.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 84 | 39.25 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 91 | 39.31 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 17 |
| 94 | 39.33 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 15 |
| 96 | 39.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 98 | 39.35 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 100 | 39.35 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 107 | 39.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 113 | 39.43 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 123 | 39.51 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 152 | 39.69 | temperature | 25 | 10 | < th | dose dependent | sin | 23 | NA |
| 157 | 39.73 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 167 | 39.78 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 214 | 40.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 242 | 40.25 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 253 | 40.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 276 | 40.42 | temperature | 20 | 90 | > th | dose dependent | sin | 5 | NA |
| 295 | 40.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 319 | 40.58 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 322 | 40.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 340 | 40.68 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 370 | 40.80 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 501 | 41.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 503 | 41.30 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 530 | 41.42 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 21 |
| 587 | 41.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 627 | 41.71 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 23 |
| 728 | 42.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 753 | 42.06 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 23 |
| 769 | 42.10 | temperature | 25 | 30 | > th | dose independent | sin | 23 | NA |
| 858 | 42.29 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 23 |
| 891 | 42.37 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 22 |
| 900 | 42.40 | temperature | 25 | 90 | > th | dose independent | rect. | 23 | 23 |
| 982 | 42.59 | temperature | 25 | 90 | < th | dose independent | no | NA | NA |
| 983 | 42.59 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 16 |