BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0511400 Os10g0511400|AK070496
(507 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0511400 Peptidase S28 family protein 890 0.0
Os10g0511600 Peptidase S28 family protein 141 1e-33
Os11g0156200 Peptidase S28 family protein 102 6e-22
Os01g0767100 Similar to Lysosomal Pro-X carboxypeptidase 95 1e-19
Os06g0647400 Similar to Lysosomal Pro-X carboxypeptidase 94 2e-19
>Os10g0511400 Peptidase S28 family protein
Length = 507
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/460 (93%), Positives = 429/460 (93%)
Query: 48 RYLTQEERWMDQTLDHFNPTDHRQFKQRYYEFLDYYRAPKGPIFLYICGESSCNGIPNSY 107
RYLTQEERWMDQTLDHFNPTDHRQFKQRYYEFLDYYRAPKGPIFLYICGESSCNGIPNSY
Sbjct: 48 RYLTQEERWMDQTLDHFNPTDHRQFKQRYYEFLDYYRAPKGPIFLYICGESSCNGIPNSY 107
Query: 108 LAVMAKKFGAAVVSPEHRYYGKSSPFESLTTENLRFLSSKQALFDLAVFRQYYQETLNAK 167
LAVMAKKFGAAVVSPEHRYYGKSSPFESLTTENLRFLSSKQALFDLAVFRQYYQETLNAK
Sbjct: 108 LAVMAKKFGAAVVSPEHRYYGKSSPFESLTTENLRFLSSKQALFDLAVFRQYYQETLNAK 167
Query: 168 YNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTCXXXXXXXXXXXXYNYTDFDKQIGESA 227
YNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTC YNYTDFDKQIGESA
Sbjct: 168 YNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTCGSLASSGVVLSVYNYTDFDKQIGESA 227
Query: 228 GPECKAALQETTKLVDGQLQSGRNAVKQLFGASTXXXXXXXXXXXXXXXXXXXQYGNPDA 287
GPECKAALQETTKLVDGQLQSGRNAVKQLFGAST QYGNPDA
Sbjct: 228 GPECKAALQETTKLVDGQLQSGRNAVKQLFGASTLANDGDFLFLLADAAAIAFQYGNPDA 287
Query: 288 LCSPIVEAKKNGTDLVETFARYVKDYYIGTFGASVASYDQEYLKNTTPPPAESAYRLWWY 347
LCSPIVEAKKNGTDLVETFARYVKDYYIGTFGASVASYDQEYLKNTTPPPAESAYRLWWY
Sbjct: 288 LCSPIVEAKKNGTDLVETFARYVKDYYIGTFGASVASYDQEYLKNTTPPPAESAYRLWWY 347
Query: 348 QVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCRNVFGEGVYPDVFMTNLYYGGTRIAGSK 407
QVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCRNVFGEGVYPDVFMTNLYYGGTRIAGSK
Sbjct: 348 QVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCRNVFGEGVYPDVFMTNLYYGGTRIAGSK 407
Query: 408 IVFANGSQDPWRHASKQKSSKELPSYLIECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPE 467
IVFANGSQDPWRHASKQKSSKELPSYLIECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPE
Sbjct: 408 IVFANGSQDPWRHASKQKSSKELPSYLIECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPE 467
Query: 468 AVNKVRKQIVDHIDLWLSECQEQGHDNEPLLGSRWSIATY 507
AVNKVRKQIVDHIDLWLSECQEQGHDNEPLLGSRWSIATY
Sbjct: 468 AVNKVRKQIVDHIDLWLSECQEQGHDNEPLLGSRWSIATY 507
>Os10g0511600 Peptidase S28 family protein
Length = 95
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 71/86 (82%)
Query: 404 AGSKIVFANGSQDPWRHASKQKSSKELPSYLIECSNCGHCSDLSGCPQAPSHIEGDSSNC 463
A SKIVF NGSQDPWRHASKQKSSK +PSY+I+C NCGH +DL GCPQ P IEGD SNC
Sbjct: 5 AASKIVFTNGSQDPWRHASKQKSSKYMPSYIIKCRNCGHGTDLRGCPQLPFRIEGDPSNC 64
Query: 464 SSPEAVNKVRKQIVDHIDLWLSECQE 489
SSP AV+ VRKQI HI LWLS+CQE
Sbjct: 65 SSPAAVSTVRKQIASHISLWLSQCQE 90
>Os11g0156200 Peptidase S28 family protein
Length = 511
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 179/474 (37%), Gaps = 68/474 (14%)
Query: 53 EERWMDQTLDHFN--PTDHRQFKQRYYEFLDYYRAPKGPIFLYIC--GESSCNGIPNSYL 108
E R+ Q LDHFN P + F+QRY ++ P+F+Y G+ + ++
Sbjct: 54 ETRYFTQRLDHFNELPASNGTFRQRYLVNGTFWGGAAAPVFVYAGNEGDVALFASNTGFM 113
Query: 109 AVMAKKFGAAVVSPEHRYYGKSSPF------ESLTTENLRFLSSKQALFDLAVFRQYYQE 162
A +F A +V EHRYYG+S PF +L++ QAL D A +
Sbjct: 114 WEAAPRFRAMLVFVEHRYYGESLPFGGTRAAAFADASAAGYLTTAQALADFA------EL 167
Query: 163 TLNAKYNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTCXXXXXXXXXXXX------YNY 216
L+ K N + + +FGGSY G L+AW R+K+PH+ Y++
Sbjct: 168 ILSLKSNLTACKAPVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPYSF 227
Query: 217 TDFDKQIGESAGPECKAALQETTKLVDGQL--QSGRNAVKQLFGA-STXXXXXXXXXXXX 273
+ +S C L+ + + L +GR + Q F
Sbjct: 228 YNVVSNDFKSESKHCYDVLRNSWSEMYKALATDAGRARLNQTFNMCKGNVDDIPGLVEKA 287
Query: 274 XXXXXXXQYGNPDALCSPI-----------VEAKKNGTDLVETFARYVKDYYIGTFGASV 322
Y P + + ++ +G D V + YY T G +
Sbjct: 288 LIYGSMMDYPTPSNFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTGG--L 345
Query: 323 ASYDQEYLKNTTPPPAESAYRLWWYQVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCRNV 382
A + ++ P + W +Q C+EV + + + +A + +L +
Sbjct: 346 ACFPGAGAEDDDP---YGMFPGWTWQACTEV----IMTMSYGIGNATVFPPDPFNLTAYL 398
Query: 383 FG----EGVYPDVFMTNLYYGGTRI------AGSKIVFANGSQDPWRHASKQKSSKELPS 432
G GV P Y+GG I +GS I+F NG +DPW KS
Sbjct: 399 AGCLATTGVPPRPHWIQSYFGGYDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSII 458
Query: 433 YLIECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPEAVNKVRKQIVDHIDLWLSE 486
L+E P+ H++ S PE + KVR+Q + I WL +
Sbjct: 459 ALVE-------------PKGGHHVDLRFSTKEDPEWLKKVRRQEMRIIADWLKQ 499
>Os01g0767100 Similar to Lysosomal Pro-X carboxypeptidase
Length = 517
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 187/479 (39%), Gaps = 79/479 (16%)
Query: 53 EERWMDQTLDHFNPTDHRQ------FKQRYY-EFLDYYRAPKGPIFLYICGESSCNGIP- 104
E R+ Q LDHF+ + F+QRY + GPIF Y E
Sbjct: 49 ETRYFRQRLDHFSFLEEEGEEGDGFFQQRYLVGRGGGWAGAGGPIFFYCGNEGDIAWFAA 108
Query: 105 NSYLA-VMAKKFGAAVVSPEHRYYGKSSPFESL-----TTENLRFLSSKQALFDLAVFRQ 158
NS L A +F A VV EHRYYG+S PF S +++L +L+++QAL D AV
Sbjct: 109 NSGLVWEAATRFAALVVFAEHRYYGESMPFGSKDKAYNNSKSLAYLTAEQALADYAVLLT 168
Query: 159 YYQETLNAKYNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTCXXXXXXXXXXXXYN--- 215
+ K N S S +FGGSY G L+AW RLK+PH+ +
Sbjct: 169 ------DLKKNLSSEGSPVVLFGGSYGGMLAAWMRLKYPHIAVGALASSAPILQFEDVVP 222
Query: 216 ---YTDFDKQIGESAGPECKAALQETTKLVDGQLQSGRNAVKQLFGASTXXXXXXXXXXX 272
+ D + C ++++ K +D Q +G++ + +L
Sbjct: 223 STIFYDLVSNDFKRESLSCFQTIKDSWKALDAQ-GNGQDGLLKLSKTFHLCKTIKNTGEL 281
Query: 273 XXXXXXXXQY-----------------GNP-DALCSPIVEAKKNGTDLVETFARYVKDYY 314
Y GNP LC+ I + + +GT ++E V YY
Sbjct: 282 SDWLSSAYSYLAMVDYPMPADFMMPLPGNPIKELCTKI-DNQPDGTSILERIYAGVNVYY 340
Query: 315 IGTFGASVASYDQEYLKNTTPPPAESAYRLWWYQVCSEVAYFQVAPKNDSVRSAKID-TR 373
+ +V +D N P + W +Q C+E+ ++ + K + T
Sbjct: 341 --NYTGTVDCFDL----NDDPHGMDG----WDWQACTEMVMPMSYSEDSMFPADKFNYTS 390
Query: 374 YHLDLCRNVFGEGVYPDVFMTNLYYGGTRIA------GSKIVFANGSQDPWRHASKQKSS 427
Y D C N FG P T +GG I+ GS I+F NG DPW K+
Sbjct: 391 YEKD-CINSFGVEPRPQWITTE--FGGHNISLVLERFGSNIIFFNGLLDPWSGGGVLKNI 447
Query: 428 KELPSYLIECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPEAVNKVRKQIVDHIDLWLSE 486
E +I P HI+ ++ P+ + ++R+ + I WLS+
Sbjct: 448 SESVVAII-------------APLGAHHIDLRPASKDDPDWLVRLRESELGIISGWLSD 493
>Os06g0647400 Similar to Lysosomal Pro-X carboxypeptidase
Length = 539
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 81/157 (51%), Gaps = 20/157 (12%)
Query: 59 QTLDHFN--PTDHRQFKQRYYEFLDYYR-------APKGPIFLYICGESSCNGIPNS--Y 107
Q LDHF P F Q+Y ++R P GPIF+Y E + +
Sbjct: 89 QELDHFTFTPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEGDIEWFATNTGF 148
Query: 108 LAVMAKKFGAAVVSPEHRYYGKSSPF---ESLTTENLRFLSSKQALFDLAVFRQYYQETL 164
+ +A FGA +V EHR+YG+S PF + + E L +L+S QAL D AV
Sbjct: 149 MFDIAPSFGALLVFIEHRFYGESKPFGNESNSSPEKLGYLTSTQALADFAVL------IT 202
Query: 165 NAKYNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTC 201
+ K+N S S VFGGSY G L++WFRLK+PH+T
Sbjct: 203 SLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTI 239
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,956,648
Number of extensions: 634292
Number of successful extensions: 1348
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1343
Number of HSP's successfully gapped: 5
Length of query: 507
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 402
Effective length of database: 11,553,331
Effective search space: 4644439062
Effective search space used: 4644439062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)