Os10g0511600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S28 family protein.
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Os10g0511600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S28 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.98 | 0.21 | 11.5 | -0.249 | 0.9 | -0.602 | 0.329 | -1.78 | 0.216 | 5.76 | 25.63 | 121 | -- | -- |
| 20.58 | 0.211 | 11.5 | -0.0784 | 0.871 | -0.797 | 0.539 | -- | 0.243 | 5.71 | 26.28 | 142 | -- | -- |
| 20.19 | 0.209 | 11.5 | -0.252 | 0.889 | -0.616 | -- | -1.87 | 0.219 | 5.78 | 25.66 | 141 | -- | -- |
| 21.07 | 0.214 | 11.5 | -0.0548 | 0.877 | -0.824 | -- | -- | 0.237 | 5.75 | 26.6 | 164 | -- | -- |
| 44.54 | 0.311 | 11.5 | -0.161 | -- | -1.25 | -- | -1.8 | 0.274 | -- | 24.4 | 264 | -- | -- |
| 29.45 | 0.254 | 11.5 | -0.172 | 1.15 | -- | 0.956 | -- | 0.228 | 5.28 | -- | -- | -- | -- |
| 31.68 | 0.264 | 11.5 | -0.17 | 1.15 | -- | -- | -- | 0.224 | 5.38 | -- | -- | -- | -- |
| 43.23 | 0.306 | 11.5 | 0.0931 | -- | -1.43 | -- | -- | 0.368 | -- | 24.68 | 273 | -- | -- |
| 21.14 | 0.214 | 11.5 | -- | 0.873 | -0.835 | -- | -- | 0.243 | 5.76 | 26.59 | 164 | -- | -- |
| 101.16 | 0.47 | 11.5 | -0.131 | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
| 32.44 | 0.266 | 11.5 | -- | 1.15 | -- | -- | -- | 0.243 | 5.39 | -- | -- | -- | -- |
| 43.45 | 0.307 | 11.5 | -- | -- | -1.42 | -- | -- | 0.355 | -- | 24.7 | 273 | -- | -- |
| 101.61 | 0.471 | 11.5 | -- | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 10 |
| 25 | 18.46 | temperature | 15 | 90 | > th | dose dependent | rect. | 24 | 19 |
| 33 | 18.67 | temperature | 20 | 270 | > th | dose dependent | rect. | 24 | 17 |
| 47 | 18.81 | temperature | 15 | 270 | > th | dose dependent | sin | 0 | NA |
| 134 | 19.39 | temperature | 25 | 90 | > th | dose dependent | sin | 21 | NA |
| 203 | 19.69 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 15 |
| 248 | 19.85 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 16 |
| 253 | 19.86 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 255 | 19.86 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 21 |
| 427 | 20.25 | temperature | 25 | 90 | > th | dose dependent | rect. | 2 | 23 |
| 437 | 20.27 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 586 | 20.49 | temperature | 30 | 270 | < th | dose independent | sin | 0 | NA |
| 659 | 20.61 | temperature | 25 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 777 | 20.78 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 22 |
| 855 | 20.85 | temperature | 25 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 864 | 20.87 | temperature | 30 | 90 | < th | dose independent | rect. | 17 | 23 |
| 892 | 20.92 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 933 | 20.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 997 | 21.06 | radiation | 40 | 270 | < th | dose independent | rect. | 17 | 22 |