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Os06g0647400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Lysosomal Pro-X carboxypeptidase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.47 (0.0357) R2 : 0.251
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.756 (0.0913) R2dC : 0.117 R2C : 0.108
β3 : 0.886 (0.117) R2dE : 0.0977 R2E : 0.123
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.205 (0.0801) R2dN8 : 0.0157 R2N8 : 0.04
σ : 0.656
deviance : 198.64
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C
peak time of C : 18.7
E
wheather : radiation
threshold : 40
memory length : 12917
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
177.39 0.626 7.44 0.728 0.72 1.47 1.66 3.39 0.451 18.8 45.86 4725 -- --
187.46 0.638 7.46 0.692 0.656 1.16 1.6 -- 0.238 18.5 40.85 7668 -- --
184.38 0.632 7.44 0.698 0.733 1.49 -- 3.54 0.461 18.8 46.23 4705 -- --
190.06 0.642 7.45 0.828 0.757 1 -- -- 0.291 18.6 40.75 15684 -- --
209.74 0.675 7.45 0.755 -- 1.65 -- 3.58 0.418 -- 46.15 4908 -- --
208.96 0.678 7.4 0.413 0.759 -- 1.66 -- 0.482 18.8 -- -- -- --
216.01 0.688 7.4 0.385 0.765 -- -- -- 0.487 18.8 -- -- -- --
217.16 0.686 7.41 0.431 -- 1.17 -- -- 0.348 -- 30 4834 -- --
198.64 0.656 7.47 -- 0.756 0.886 -- -- 0.205 18.7 40 12917 -- --
246.61 0.734 7.38 0.368 -- -- -- -- 0.472 -- -- -- -- --
219.92 0.694 7.41 -- 0.76 -- -- -- 0.444 18.8 -- -- -- --
223.47 0.696 7.42 -- -- 1.06 -- -- 0.332 -- 30 4841 -- --
250.18 0.738 7.39 -- -- -- -- -- 0.431 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 164.27 wind 1.0 43200 < th dose dependent rect. 6 1
2 167.80 wind 1.0 43200 < th dose dependent rect. 15 9
3 167.95 wind 1.0 43200 < th dose dependent rect. 12 12
4 168.12 precipitation 0.1 43200 > th dose dependent rect. 24 3
7 168.29 humidity 70.0 43200 < th dose independent rect. 14 1
8 168.29 wind 1.0 43200 < th dose independent rect. 15 9
10 168.39 wind 1.0 14400 < th dose dependent rect. 21 2
11 168.47 precipitation 0.1 43200 < th dose independent rect. 24 3
12 168.47 precipitation 0.1 43200 < th dose dependent rect. 24 3
13 168.51 precipitation 0.1 43200 > th dose independent rect. 24 3
24 169.66 wind 1.0 14400 < th dose independent rect. 21 4
25 169.67 precipitation 0.1 43200 > th dose independent rect. 22 5
26 169.67 wind 1.0 14400 < th dose dependent rect. 18 7
28 169.69 precipitation 0.1 43200 > th dose dependent rect. 22 5
29 169.74 precipitation 0.1 43200 < th dose independent rect. 23 1
30 169.74 precipitation 0.1 43200 < th dose dependent rect. 23 1
32 169.76 wind 1.0 14400 < th dose dependent rect. 21 4
34 169.80 wind 1.0 43200 > th dose independent rect. 16 8
35 169.81 precipitation 0.1 43200 < th dose independent rect. 22 5
36 169.81 precipitation 0.1 43200 < th dose dependent rect. 22 5
38 169.86 wind 1.0 14400 < th dose independent rect. 18 8
41 169.88 temperature 30.0 43200 < th dose independent rect. 15 1
49 170.03 temperature 30.0 43200 > th dose independent rect. 15 1
51 170.04 wind 1.0 14400 < th dose dependent rect. 8 16
61 170.17 precipitation 0.1 43200 > th dose independent rect. 23 1
62 170.17 precipitation 0.1 43200 > th dose dependent rect. 23 1
70 170.31 wind 1.0 14400 < th dose dependent sin 17 NA
74 170.40 wind 1.0 14400 < th dose dependent rect. 10 16
80 170.54 radiation 10.0 14400 > th dose dependent rect. 17 14
96 170.77 wind 1.0 14400 > th dose independent rect. 21 4
102 170.94 radiation 10.0 14400 > th dose dependent rect. 6 1
118 170.99 temperature 30.0 43200 < th dose independent rect. 15 18
122 171.05 radiation 1.0 4320 < th dose dependent rect. 5 1
123 171.08 temperature 30.0 43200 > th dose independent rect. 15 18
133 171.17 wind 1.0 14400 < th dose independent rect. 21 2
139 171.24 temperature 30.0 43200 < th dose independent rect. 14 9
170 171.30 wind 1.0 14400 > th dose independent rect. 19 7
205 171.39 temperature 25.0 43200 < th dose independent rect. 6 2
219 171.51 temperature 25.0 43200 > th dose independent rect. 6 2
230 171.59 temperature 30.0 43200 < th dose independent sin 12 NA
251 171.64 temperature 30.0 43200 > th dose independent sin 12 NA
284 171.74 humidity 70.0 43200 > th dose independent rect. 11 4
301 171.82 radiation 1.0 4320 < th dose dependent rect. 20 10
312 171.87 wind 1.0 43200 < th dose dependent rect. 5 3
316 171.88 wind 1.0 14400 < th dose independent rect. 8 18
323 171.90 radiation 1.0 4320 < th dose dependent rect. 22 8
371 171.97 radiation 1.0 4320 < th dose dependent rect. 1 5
381 172.00 radiation 1.0 4320 < th dose dependent rect. 3 3
395 172.07 precipitation 0.1 43200 > th dose independent rect. 21 16
420 172.14 temperature 30.0 43200 > th dose independent rect. 8 10
448 172.16 precipitation 0.1 43200 < th dose independent rect. 21 16
455 172.16 precipitation 0.1 43200 < th dose dependent rect. 21 16
459 172.18 temperature 30.0 43200 > th dose independent no NA NA
573 172.19 temperature 30.0 43200 < th dose independent rect. 8 10
581 172.19 temperature 30.0 43200 < th dose independent rect. 23 19
588 172.19 temperature 25.0 43200 > th dose dependent rect. 17 2
589 172.20 humidity 80.0 43200 < th dose independent rect. 17 1
608 172.20 temperature 30.0 43200 < th dose independent rect. 3 14
613 172.20 temperature 30.0 43200 < th dose independent rect. 1 16
624 172.21 temperature 30.0 43200 < th dose independent no NA NA
727 172.24 radiation 1.0 43200 < th dose independent rect. 18 5
733 172.27 radiation 1.0 43200 < th dose independent rect. 18 1
806 172.29 precipitation 0.1 43200 > th dose independent rect. 21 18
832 172.32 temperature 20.0 43200 > th dose dependent rect. 6 1
857 172.37 wind 1.0 14400 > th dose independent rect. 8 18
858 172.37 precipitation 0.1 43200 < th dose independent rect. 21 18
861 172.37 precipitation 0.1 43200 < th dose dependent rect. 21 18
868 172.39 radiation 1.0 43200 < th dose dependent rect. 18 8
871 172.40 radiation 1.0 43200 < th dose dependent rect. 18 5
881 172.42 radiation 1.0 43200 < th dose dependent rect. 18 1
896 172.49 humidity 50.0 43200 > th dose dependent rect. 12 1
910 172.53 temperature 25.0 43200 > th dose dependent rect. 12 21
916 172.54 temperature 25.0 43200 > th dose dependent rect. 14 19
921 172.55 temperature 25.0 43200 > th dose dependent rect. 4 16
927 172.56 temperature 25.0 43200 > th dose dependent rect. 6 14
982 172.61 temperature 25.0 43200 > th dose dependent sin 18 NA