BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0647400 Os06g0647400|AK068457
(539 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0647400 Similar to Lysosomal Pro-X carboxypeptidase 966 0.0
Os01g0767100 Similar to Lysosomal Pro-X carboxypeptidase 516 e-146
Os11g0156200 Peptidase S28 family protein 469 e-132
Os10g0511400 Peptidase S28 family protein 120 3e-27
>Os06g0647400 Similar to Lysosomal Pro-X carboxypeptidase
Length = 539
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/460 (100%), Positives = 460/460 (100%)
Query: 80 KPFTAHYFPQELDHFTFTPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEGDI 139
KPFTAHYFPQELDHFTFTPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEGDI
Sbjct: 80 KPFTAHYFPQELDHFTFTPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEGDI 139
Query: 140 EWFATNTGFMFDIAPSFGALLVFIEHRFYGESKPFGNESNSSPEKLGYLTSTQALADFAV 199
EWFATNTGFMFDIAPSFGALLVFIEHRFYGESKPFGNESNSSPEKLGYLTSTQALADFAV
Sbjct: 140 EWFATNTGFMFDIAPSFGALLVFIEHRFYGESKPFGNESNSSPEKLGYLTSTQALADFAV 199
Query: 200 LITSLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAVASSAPILQFDYITPWSS 259
LITSLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAVASSAPILQFDYITPWSS
Sbjct: 200 LITSLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAVASSAPILQFDYITPWSS 259
Query: 260 FYEAVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRACKTVKSVYSFRNWL 319
FYEAVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRACKTVKSVYSFRNWL
Sbjct: 260 FYEAVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRACKTVKSVYSFRNWL 319
Query: 320 WTAFVYTAMVDYPTPANFLMNLPAYPIKEMCKIIHGFPAGADIVDKAFAAASLYYNYTGD 379
WTAFVYTAMVDYPTPANFLMNLPAYPIKEMCKIIHGFPAGADIVDKAFAAASLYYNYTGD
Sbjct: 320 WTAFVYTAMVDYPTPANFLMNLPAYPIKEMCKIIHGFPAGADIVDKAFAAASLYYNYTGD 379
Query: 380 QTCFQLEDGEDPHGLSGWGWQACTEMVMPMTISNESMFPPFTFTYEGKSDDCFQSYGVRP 439
QTCFQLEDGEDPHGLSGWGWQACTEMVMPMTISNESMFPPFTFTYEGKSDDCFQSYGVRP
Sbjct: 380 QTCFQLEDGEDPHGLSGWGWQACTEMVMPMTISNESMFPPFTFTYEGKSDDCFQSYGVRP 439
Query: 440 RPHWITTEYGGNRIDLVLKRFGSNIIFSNGMRDPWSRGGVLKNISSSIIALVTEKGAHHL 499
RPHWITTEYGGNRIDLVLKRFGSNIIFSNGMRDPWSRGGVLKNISSSIIALVTEKGAHHL
Sbjct: 440 RPHWITTEYGGNRIDLVLKRFGSNIIFSNGMRDPWSRGGVLKNISSSIIALVTEKGAHHL 499
Query: 500 DFRSATKDDPDWVVEQRRQEVKIIQGWIDQYNEDLAQISK 539
DFRSATKDDPDWVVEQRRQEVKIIQGWIDQYNEDLAQISK
Sbjct: 500 DFRSATKDDPDWVVEQRRQEVKIIQGWIDQYNEDLAQISK 539
>Os01g0767100 Similar to Lysosomal Pro-X carboxypeptidase
Length = 517
Score = 516 bits (1330), Expect = e-146, Method: Compositional matrix adjust.
Identities = 247/455 (54%), Positives = 312/455 (68%), Gaps = 14/455 (3%)
Query: 82 FTAHYFPQELDHFTF----TPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEG 137
+ YF Q LDHF+F F Q+YLV GPIF Y GNEG
Sbjct: 48 YETRYFRQRLDHFSFLEEEGEEGDGFFQQRYLVG------RGGGWAGAGGPIFFYCGNEG 101
Query: 138 DIEWFATNTGFMFDIAPSFGALLVFIEHRFYGESKPFGNESNS--SPEKLGYLTSTQALA 195
DI WFA N+G +++ A F AL+VF EHR+YGES PFG++ + + + L YLT+ QALA
Sbjct: 102 DIAWFAANSGLVWEAATRFAALVVFAEHRYYGESMPFGSKDKAYNNSKSLAYLTAEQALA 161
Query: 196 DFAVLITSLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAVASSAPILQFDYIT 255
D+AVL+T LK NLS+ SPVV+FGGSYGGMLA+W RLKYPH+ +GA+ASSAPILQF+ +
Sbjct: 162 DYAVLLTDLKKNLSSEGSPVVLFGGSYGGMLAAWMRLKYPHIAVGALASSAPILQFEDVV 221
Query: 256 PWSSFYEAVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRACKTVKSVYSF 315
P + FY+ VS D+K ES +CF IK +W +D +G+ GLL+LSKTF CKT+K+
Sbjct: 222 PSTIFYDLVSNDFKRESLSCFQTIKDSWKALDAQGNGQDGLLKLSKTFHLCKTIKNTGEL 281
Query: 316 RNWLWTAFVYTAMVDYPTPANFLMNLPAYPIKEMCKIIHGFPAGADIVDKAFAAASLYYN 375
+WL +A+ Y AMVDYP PA+F+M LP PIKE+C I P G I+++ +A ++YYN
Sbjct: 282 SDWLSSAYSYLAMVDYPMPADFMMPLPGNPIKELCTKIDNQPDGTSILERIYAGVNVYYN 341
Query: 376 YTGDQTCFQLEDGEDPHGLSGWGWQACTEMVMPMTISNESMFPPFTFTYEGKSDDCFQSY 435
YTG CF L D DPHG+ GW WQACTEMVMPM+ S +SMFP F Y DC S+
Sbjct: 342 YTGTVDCFDLND--DPHGMDGWDWQACTEMVMPMSYSEDSMFPADKFNYTSYEKDCINSF 399
Query: 436 GVRPRPHWITTEYGGNRIDLVLKRFGSNIIFSNGMRDPWSRGGVLKNISSSIIALVTEKG 495
GV PRP WITTE+GG+ I LVL+RFGSNIIF NG+ DPWS GGVLKNIS S++A++ G
Sbjct: 400 GVEPRPQWITTEFGGHNISLVLERFGSNIIFFNGLLDPWSGGGVLKNISESVVAIIAPLG 459
Query: 496 AHHLDFRSATKDDPDWVVEQRRQEVKIIQGWIDQY 530
AHH+D R A+KDDPDW+V R E+ II GW+ Y
Sbjct: 460 AHHIDLRPASKDDPDWLVRLRESELGIISGWLSDY 494
>Os11g0156200 Peptidase S28 family protein
Length = 511
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/462 (51%), Positives = 312/462 (67%), Gaps = 17/462 (3%)
Query: 82 FTAHYFPQELDHFTFTPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEGDIEW 141
+ YF Q LDHF P ++ F Q+YLVN TFW +AA P+FVY GNEGD+
Sbjct: 53 YETRYFTQRLDHFNELPASNGTFRQRYLVNGTFWGGAAA-------PVFVYAGNEGDVAL 105
Query: 142 FATNTGFMFDIAPSFGALLVFIEHRFYGESKPFGNESNSSPEKL---GYLTSTQALADFA 198
FA+NTGFM++ AP F A+LVF+EHR+YGES PFG ++ GYLT+ QALADFA
Sbjct: 106 FASNTGFMWEAAPRFRAMLVFVEHRYYGESLPFGGTRAAAFADASAAGYLTTAQALADFA 165
Query: 199 VLITSLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAVASSAPILQFDYITPWS 258
LI SLK NL+A +PVV+FGGSYGGMLA+W R+KYPH+ +GAVASSAPIL + ++
Sbjct: 166 ELILSLKSNLTACKAPVVIFGGSYGGMLAAWMRMKYPHIVMGAVASSAPILGLNGLSDPY 225
Query: 259 SFYEAVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRACKTVKSVYSFRNW 318
SFY VS D+KSES +C+ V++ +W + + +TDAG +L++TF CK +V
Sbjct: 226 SFYNVVSNDFKSESKHCYDVLRNSWSEMYKALATDAGRARLNQTFNMCK--GNVDDIPGL 283
Query: 319 LWTAFVYTAMVDYPTPANFLMNLPAYPIKEMCKIIHGFPAGADIVDKAFAAASLYYNYTG 378
+ A +Y +M+DYPTP+NFL +LPAYP++E+C+ I +G D V + A ++YYN TG
Sbjct: 284 VEKALIYGSMMDYPTPSNFLTSLPAYPVREICRAIDKPTSGNDTVSRIKDAMTIYYNSTG 343
Query: 379 DQTCFQLEDGED--PHGL-SGWGWQACTEMVMPMT--ISNESMFPPFTFTYEGKSDDCFQ 433
CF ED P+G+ GW WQACTE++M M+ I N ++FPP F C
Sbjct: 344 GLACFPGAGAEDDDPYGMFPGWTWQACTEVIMTMSYGIGNATVFPPDPFNLTAYLAGCLA 403
Query: 434 SYGVRPRPHWITTEYGGNRIDLVLKRFGSNIIFSNGMRDPWSRGGVLKNISSSIIALVTE 493
+ GV PRPHWI + +GG I VLKR GSNIIF NG+RDPWS GG+LK+IS+SIIALV
Sbjct: 404 TTGVPPRPHWIQSYFGGYDIRNVLKRSGSNIIFFNGLRDPWSAGGILKSISNSIIALVEP 463
Query: 494 KGAHHLDFRSATKDDPDWVVEQRRQEVKIIQGWIDQYNEDLA 535
KG HH+D R +TK+DP+W+ + RRQE++II W+ QY D A
Sbjct: 464 KGGHHVDLRFSTKEDPEWLKKVRRQEMRIIADWLKQYYSDEA 505
>Os10g0511400 Peptidase S28 family protein
Length = 507
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 192/474 (40%), Gaps = 73/474 (15%)
Query: 89 QELDHFTFTPNASAVFYQKYLVNDTFWRRSAAAGETPAGPIFVYTGNEGDIEWFATNTGF 148
Q LDHF P F Q+Y ++R P GPIF+Y E + +
Sbjct: 59 QTLDHFN--PTDHRQFKQRYYEFLDYYR-------APKGPIFLYICGESSCNGIPNS--Y 107
Query: 149 MFDIAPSFGALLVFIEHRFYGESKPFGNESNSSPEKLGYLTSTQALADFAVL------IT 202
+ +A FGA +V EHR+YG+S PF + + E L +L+S QAL D AV
Sbjct: 108 LAVMAKKFGAAVVSPEHRYYGKSSPF---ESLTTENLRFLSSKQALFDLAVFRQYYQETL 164
Query: 203 SLKHNLSAVSSPVVVFGGSYGGMLASWFRLKYPHVTIGAVASSAPILQFDYITPWSSFYE 262
+ K+N S S VFGGSY G L++WFRLK+PH+T G++ASS +L + ++ F +
Sbjct: 165 NAKYNRSGADSSWFVFGGSYAGALSAWFRLKFPHLTCGSLASSGVVLS---VYNYTDFDK 221
Query: 263 AVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRACKTVKSVYSFRNWLWTA 322
+ + E C + ++ L+D G +G + + F A T+ + F L A
Sbjct: 222 QIGESAGPE---CKAALQETTKLVD--GQLQSGRNAVKQLFGA-STLANDGDFLFLLADA 275
Query: 323 FVYTAMVDYPTPANFLMNLPAYPIKEMCK-IIHGFPAGADIVDKAFAAASLYYNYTGDQT 381
P +C I+ G D+V+ YY T +
Sbjct: 276 AAIAFQYGNP--------------DALCSPIVEAKKNGTDLVETFARYVKDYYIGTFGAS 321
Query: 382 CFQ-----LEDGEDPHGLSG---WGWQACTEMVMPMTISNESMFPPFTFTYEGKSDDCFQ 433
L++ P S W +Q C+E+ D C
Sbjct: 322 VASYDQEYLKNTTPPPAESAYRLWWYQVCSEVAYFQVAPKNDSVRSAKIDTRYHLDLCRN 381
Query: 434 SY--GVRPRPHWITTEYGGNRIDLVLKRFGSNIIFSNGMRDPW---SRGGVLKNISSSII 488
+ GV P YGG RI GS I+F+NG +DPW S+ K + S +I
Sbjct: 382 VFGEGVYPDVFMTNLYYGGTRIA------GSKIVFANGSQDPWRHASKQKSSKELPSYLI 435
Query: 489 ALVT----------EKGAHHLDFRSATKDDPDWVVEQRRQEVKIIQGWIDQYNE 532
+ H++ S+ P+ V + R+Q V I W+ + E
Sbjct: 436 ECSNCGHCSDLSGCPQAPSHIEGDSSNCSSPEAVNKVRKQIVDHIDLWLSECQE 489
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,312,850
Number of extensions: 773792
Number of successful extensions: 1319
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1310
Number of HSP's successfully gapped: 4
Length of query: 539
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 433
Effective length of database: 11,501,117
Effective search space: 4979983661
Effective search space used: 4979983661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)