Os10g0511400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S28 family protein.
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Os10g0511400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S28 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.26 | 0.217 | 11.6 | 0.257 | 0.918 | -0.675 | -0.399 | 0.321 | 0.205 | 17.9 | 24.6 | 19 | -- | -- |
| 21.29 | 0.215 | 11.6 | 0.216 | 0.913 | -0.639 | -0.371 | -- | 0.197 | 17.9 | 24.5 | 12 | -- | -- |
| 21.62 | 0.217 | 11.6 | 0.243 | 0.925 | -0.666 | -- | 0.178 | 0.202 | 18 | 24.57 | 18 | -- | -- |
| 21.61 | 0.217 | 11.6 | 0.221 | 0.915 | -0.65 | -- | -- | 0.195 | 18 | 24.51 | 18 | -- | -- |
| 56.45 | 0.352 | 11.6 | -0.00159 | -- | -0.144 | -- | -0.822 | 0.101 | -- | 19.98 | 61 | -- | -- |
| 27.82 | 0.247 | 11.6 | 0.112 | 0.756 | -- | -0.33 | -- | 0.127 | 18.8 | -- | -- | -- | -- |
| 28.07 | 0.248 | 11.6 | 0.117 | 0.755 | -- | -- | -- | 0.126 | 18.9 | -- | -- | -- | -- |
| 57.13 | 0.352 | 11.6 | 0.128 | -- | -0.197 | -- | -- | 0.135 | -- | 19.9 | 2 | -- | -- |
| 22.85 | 0.223 | 11.6 | -- | 0.893 | -0.592 | -- | -- | 0.169 | 18 | 24.6 | 12 | -- | -- |
| 57.96 | 0.356 | 11.6 | 0.101 | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
| 28.43 | 0.249 | 11.6 | -- | 0.753 | -- | -- | -- | 0.113 | 18.9 | -- | -- | -- | -- |
| 57.61 | 0.353 | 11.6 | -- | -- | -0.162 | -- | -- | 0.123 | -- | 19.7 | 2 | -- | -- |
| 58.23 | 0.356 | 11.6 | -- | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 4 | 19.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 7 | 19.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 9 | 19.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 10 |
| 11 | 19.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 12 | 19.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 15 | 19.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 20 | 19.86 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 23 | 19.88 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 34 | 19.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 40 | 20.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 46 | 20.08 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 3 |
| 47 | 20.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 67 | 20.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 114 | 20.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 153 | 20.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 168 | 20.51 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 9 |
| 276 | 20.82 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 283 | 20.85 | temperature | 20 | 10 | > th | dose dependent | sin | 1 | NA |
| 289 | 20.87 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 3 |
| 309 | 20.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 386 | 21.03 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 405 | 21.07 | temperature | 30 | 270 | < th | dose independent | rect. | 21 | 22 |
| 531 | 21.27 | temperature | 30 | 720 | < th | dose independent | rect. | 22 | 14 |
| 580 | 21.33 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 610 | 21.36 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 656 | 21.41 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 737 | 21.50 | temperature | 30 | 270 | < th | dose independent | rect. | 23 | 17 |
| 752 | 21.51 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 785 | 21.54 | temperature | 30 | 720 | < th | dose independent | rect. | 20 | 16 |
| 793 | 21.55 | temperature | 30 | 270 | < th | dose independent | sin | 2 | NA |
| 875 | 21.62 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 904 | 21.65 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 919 | 21.66 | temperature | 25 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 925 | 21.68 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 965 | 21.71 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 16 |
| 977 | 21.72 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 992 | 21.73 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |