BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0415800 Os10g0415800|AK066318
(782 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0415800 Similar to Acylamino acid-releasing enzyme 1567 0.0
Os10g0415600 Similar to Acylamino acid-releasing enzyme 982 0.0
Os06g0215300 TolB, C-terminal domain containing protein 89 2e-17
Os06g0215400 TolB, C-terminal domain containing protein 78 3e-14
>Os10g0415800 Similar to Acylamino acid-releasing enzyme
Length = 782
Score = 1567 bits (4057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 759/782 (97%), Positives = 759/782 (97%)
Query: 1 IFFEKDNPLGMDALASEEYASQSKLLQEFTNAPSIDGAWVFQTNNEDRSTAMYSISQTNL 60
IFFEKDNPLGMDALASEEYASQSKLLQEFTNAPSIDGAWVFQTNNEDRSTAMYSISQTNL
Sbjct: 1 IFFEKDNPLGMDALASEEYASQSKLLQEFTNAPSIDGAWVFQTNNEDRSTAMYSISQTNL 60
Query: 61 LANNKRKYILFSHIMRNGTNLLDFQWSPFPIQMDXXXXXXXXXXXXKLLVVRNGEKGSPT 120
LANNKRKYILFSHIMRNGTNLLDFQWSPFPIQMD KLLVVRNGEKGSPT
Sbjct: 61 LANNKRKYILFSHIMRNGTNLLDFQWSPFPIQMDGVSAVVPSPSGSKLLVVRNGEKGSPT 120
Query: 121 KLEIVDQSHVEKEIHVAQSVHGPLYTDEWFHGISWNQEETLIAYIAEDSPEPKPVFDDTG 180
KLEIVDQSHVEKEIHVAQSVHGPLYTDEWFHGISWNQEETLIAYIAEDSPEPKPVFDDTG
Sbjct: 121 KLEIVDQSHVEKEIHVAQSVHGPLYTDEWFHGISWNQEETLIAYIAEDSPEPKPVFDDTG 180
Query: 181 YRKEGSSEKDCNNWKGQGDWEEDWGETYSKKGRPSLFVLDINSGEVRAAKGISRSLSVGQ 240
YRKEGSSEKDCNNWKGQGDWEEDWGETYSKKGRPSLFVLDINSGEVRAAKGISRSLSVGQ
Sbjct: 181 YRKEGSSEKDCNNWKGQGDWEEDWGETYSKKGRPSLFVLDINSGEVRAAKGISRSLSVGQ 240
Query: 241 VVWAPPSSCGRQKYLIFVGWLEHNGFQNTPRKLGIKYCSNRPCSLYSTLCPFEESDVDNA 300
VVWAPPSSCGRQKYLIFVGWLEHNGFQNTPRKLGIKYCSNRPCSLYSTLCPFEESDVDNA
Sbjct: 241 VVWAPPSSCGRQKYLIFVGWLEHNGFQNTPRKLGIKYCSNRPCSLYSTLCPFEESDVDNA 300
Query: 301 PASDSKLEPASVAINLTPSISSAFFPRFSKDGKLLVFLSANRAVDSGAHNATDSLHKINW 360
PASDSKLEPASVAINLTPSISSAFFPRFSKDGKLLVFLSANRAVDSGAHNATDSLHKINW
Sbjct: 301 PASDSKLEPASVAINLTPSISSAFFPRFSKDGKLLVFLSANRAVDSGAHNATDSLHKINW 360
Query: 361 PSDWKMDQYLEITDVIPIVMCPQDGCFPGLYCSSMLSNPWLSDRCTMILTSAWRSTEVIL 420
PSDWKMDQYLEITDVIPIVMCPQDGCFPGLYCSSMLSNPWLSDRCTMILTSAWRSTEVIL
Sbjct: 361 PSDWKMDQYLEITDVIPIVMCPQDGCFPGLYCSSMLSNPWLSDRCTMILTSAWRSTEVIL 420
Query: 421 SIDVLSGKATRISPENSEYSWSALAVDGHNVLAVSSSPIDPPQIKYGHQVSLKDQTCTWV 480
SIDVLSGKATRISPENSEYSWSALAVDGHNVLAVSSSPIDPPQIKYGHQVSLKDQTCTWV
Sbjct: 421 SIDVLSGKATRISPENSEYSWSALAVDGHNVLAVSSSPIDPPQIKYGHQVSLKDQTCTWV 480
Query: 481 WDEVNNNPLMAANNKVKALLSHHQFSILKIPVTNPSDDLSDGSKLPFEAIFVSCKDSSHK 540
WDEVNNNPLMAANNKVKALLSHHQFSILKIPVTNPSDDLSDGSKLPFEAIFVSCKDSSHK
Sbjct: 481 WDEVNNNPLMAANNKVKALLSHHQFSILKIPVTNPSDDLSDGSKLPFEAIFVSCKDSSHK 540
Query: 541 PTILVLHGGPHXXXXXXXXXXXAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGSQDV 600
PTILVLHGGPH AFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGSQDV
Sbjct: 541 PTILVLHGGPHSVSVSSYSKTSAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGSQDV 600
Query: 601 QDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLSLMI 660
QDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLSLMI
Sbjct: 601 QDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLSLMI 660
Query: 661 GTTDIPDWCYAVACGSEGRQHASESPSPDHLRLFYQKSPIAHISKVKAPLLMLLGGADLR 720
GTTDIPDWCYAVACGSEGRQHASESPSPDHLRLFYQKSPIAHISKVKAPLLMLLGGADLR
Sbjct: 661 GTTDIPDWCYAVACGSEGRQHASESPSPDHLRLFYQKSPIAHISKVKAPLLMLLGGADLR 720
Query: 721 VPISNGLQYARALRERGGEIRIMMFPDDIHEINIPQSDFESFLNIGVWFKKHLSISASDA 780
VPISNGLQYARALRERGGEIRIMMFPDDIHEINIPQSDFESFLNIGVWFKKHLSISASDA
Sbjct: 721 VPISNGLQYARALRERGGEIRIMMFPDDIHEINIPQSDFESFLNIGVWFKKHLSISASDA 780
Query: 781 SA 782
SA
Sbjct: 781 SA 782
>Os10g0415600 Similar to Acylamino acid-releasing enzyme
Length = 775
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/772 (61%), Positives = 586/772 (75%), Gaps = 10/772 (1%)
Query: 4 EKDNPLGMDALASEEYASQSKLLQEFTNAPSIDGAWVFQTNNEDRSTAMYSISQTNLLAN 63
EK PLGMD +EYASQSKLLQEF P+I AW+F + E+ S A+ S+ QT+LLAN
Sbjct: 12 EKGLPLGMDVSMVDEYASQSKLLQEFVKIPTIGNAWIFNSKTENTSRAIVSVGQTDLLAN 71
Query: 64 NKRKYILFSHIMRNGTNLLDFQWSPFPIQMDXXXXXXXXXXXXKLLVVRNGEKGSPTKLE 123
KR ++L SHI +N +N +DFQWSPFPI+M KLL++RN E SPTKLE
Sbjct: 72 KKRSFLLNSHISKNSSNSVDFQWSPFPIEMSGVSAVIPSPSGRKLLLIRNSEDDSPTKLE 131
Query: 124 IVDQSHVEKEIHVAQSVHGPLYTDEWFHGISWNQEETLIAYIAEDSPEPKPVFDDTGYRK 183
+ +E EIH+AQSVHG LY DEWF GISWNQEETL+AY+AE+ P+PKP F+D+GY+K
Sbjct: 132 VWGPCQLENEIHIAQSVHGSLYVDEWFEGISWNQEETLVAYVAEEPPQPKPEFNDSGYKK 191
Query: 184 EGSSEKDCNNWKGQGDWEEDWGETYSKKGRPSLFVLDINSGEVRAAKGISRSLSVGQVVW 243
GSSEKDC +WKG+GDWEE WGETYSKK P+LFV++I+SGEVRA KGI R+LSVGQV+W
Sbjct: 192 AGSSEKDCKSWKGKGDWEETWGETYSKKRIPALFVVNISSGEVRAVKGIPRTLSVGQVIW 251
Query: 244 APPSSCGRQKYLIFVGWLEHNGFQNTPRKLGIKYCSNRPCSLYSTLCPF-EESDVDNAPA 302
AP SS L+FV W NG+Q TPRKLGIKYC NRPC+LY+ PF EE+D +
Sbjct: 252 APSSS----HSLVFVAWSSDNGYQKTPRKLGIKYCFNRPCALYAVPDPFMEEADKPSLNV 307
Query: 303 SDSKLEPASVAINLTPSISSAFFPRFSKDGKLLVFLSANRAVDSGAHNATDSLHKINWPS 362
S + P + LT +SSAFFPRFS DGK LVF+SA A+DSG HNAT+S+HKI+WP+
Sbjct: 308 SKGETAPTT---KLTSELSSAFFPRFSPDGKYLVFISAKSAIDSGTHNATNSMHKIDWPA 364
Query: 363 DWKMDQYLEITDVIPIVMCPQDGCFPGLYCSSMLSNPWLSDRCTMILTSAWRSTEVILSI 422
D K++ L + DV+PIVMCPQDGCFPGLYCS +L NPWL+D TMIL+S W S EVILS+
Sbjct: 365 DGKLEG-LSVADVVPIVMCPQDGCFPGLYCSGILRNPWLTDGQTMILSSIWGSKEVILSV 423
Query: 423 DVLSGKATRISPENSEYSWSALAVDGHNVLAVSSSPIDPPQIKYGHQVSLKDQTCTWVWD 482
+V+S + +R+SP++S+YSW+ LA+D N+LAVSSS I PQI YG +V + W W
Sbjct: 424 NVVSREVSRVSPQDSDYSWNVLALDKDNILAVSSSLITVPQIYYGSEVCQTGKPNQWEWQ 483
Query: 483 EVNNNPLMAANNKVKALLSHHQFSILKIPVTNPSDDLSDGSKLPFEAIFVSCKDSSHKPT 542
E+ P + ++K+ A+L+ H+FSILKIP++N S+ L+DG+KLPFEAIFVS KDS+ +PT
Sbjct: 484 EIAT-PFPSPSDKISAILADHKFSILKIPISNSSNKLADGAKLPFEAIFVSWKDSATRPT 542
Query: 543 ILVLHGGPHXXXXXXXXXXXAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGSQDVQD 602
I+VLHGGPH AFL S G+NLL+VNYRG+ GFGEEALQSLPG +GSQDV D
Sbjct: 543 IVVLHGGPHTVYPSSYSKSLAFLYSQGYNLLVVNYRGSLGFGEEALQSLPGNIGSQDVND 602
Query: 603 CLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLSLMIGT 662
LTALD+VI+ GLIDASKVAV+G SHGGFLTTHLIGQAP F+ AAARNPVCNLSLM+GT
Sbjct: 603 VLTALDFVIKKGLIDASKVAVVGGSHGGFLTTHLIGQAPGTFVAAAARNPVCNLSLMVGT 662
Query: 663 TDIPDWCYAVACGSEGRQHASESPSPDHLRLFYQKSPIAHISKVKAPLLMLLGGADLRVP 722
TDIP+WC+ G EG+ SE PS D L F+QKSPI+HISKV P L LLG DLRVP
Sbjct: 663 TDIPEWCFVEIYGKEGKNCFSEYPSFDDLCQFHQKSPISHISKVSTPTLFLLGAQDLRVP 722
Query: 723 ISNGLQYARALRERGGEIRIMMFPDDIHEINIPQSDFESFLNIGVWFKKHLS 774
+SNGLQYAR L+E G E +I++FP+D+H ++ PQSDFESFLNIGVWFKKH+S
Sbjct: 723 VSNGLQYARTLKEMGVETKIIVFPEDMHGLDKPQSDFESFLNIGVWFKKHMS 774
>Os06g0215300 TolB, C-terminal domain containing protein
Length = 683
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 539 HKPTILV-LHGGPHXXXXXXXXXXXAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGS 597
KP +LV HGGP + S G+ L VNY G+ GFG E + L GK G
Sbjct: 444 EKPPLLVKTHGGPTAETRGILDLSVQYWTSRGWAYLDVNYGGSTGFGREYRERLLGKWGI 503
Query: 598 QDVQDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLS 657
DV DC + ++E G +D ++ + G S GG+ T + D F A+ + +LS
Sbjct: 504 VDVDDCCSCARVLVESGKVDERRLCITGRSAGGYTTLASLAFR-DTFKAGASLYGIGDLS 562
Query: 658 LMIGTTDIPDWCYAVACGSEGRQHASESPSPDHL----RLFYQKSPIAHISKVKAPLLML 713
L+ T H ES D+L +Y++SPI + K P+++
Sbjct: 563 LLRAET-----------------HKFESHYTDNLVGNENAYYERSPINFVDKFTCPVILF 605
Query: 714 LGGADLRVPISNGLQYARALRERGGEIRIMMFPDDIH 750
G D VP + +AL+E+G + ++ + + H
Sbjct: 606 QGLDDKVVPPDQARKIYKALKEKGLPVALVEYEGEQH 642
>Os06g0215400 TolB, C-terminal domain containing protein
Length = 679
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 25/249 (10%)
Query: 507 ILKIPVTNPSDDLSDGSKLPFEAIFVSCKDSSHKPTILV-LHGGPHXXXXXXXXXXXAFL 565
++ P P P IF D KP +LV HGGP +
Sbjct: 406 FMEFPTVVPGQKAYAYFYAPHNHIFQGSSD--EKPPLLVRTHGGPTDEARGVLDLGVQYW 463
Query: 566 ASLGFNLLIVNYRGTPGFGEEALQSLPGKVGSQDVQDCLTALDYVIEGGLIDASKVAVIG 625
S G+ + VNY G+ G+G + + L G+ G DV DC + +++E G +DA ++ V G
Sbjct: 464 TSRGWAFVDVNYGGSTGYGRKFRERLLGQWGVVDVNDCCSCATFLVETGRVDAQRLCVTG 523
Query: 626 ISHGGFLTTHLIGQAPDRFMVAAARNPVCNLSLMIGTTDIPDWCYAVACGSEGRQHASES 685
S GGF T + A R S + G D+ H E+
Sbjct: 524 ESAGGFTTLACL----------AFRQIFKAGSSLYGIADLASL--------RAGMHKFEA 565
Query: 686 PSPDHL----RLFYQKSPIAHISKVKAPLLMLLGGADLRVPISNGLQYARALRERGGEIR 741
D+L + ++++SPI + + P+++ G D V +A++++G +
Sbjct: 566 YYIDNLVGNRKAYFERSPINFVDRFSCPIILFQGLEDTVVSPVQATTIYKAIKDKGLPVA 625
Query: 742 IMMFPDDIH 750
++ + + H
Sbjct: 626 LVEYEGEQH 634
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 28,487,879
Number of extensions: 1257708
Number of successful extensions: 2463
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2456
Number of HSP's successfully gapped: 4
Length of query: 782
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 673
Effective length of database: 11,344,475
Effective search space: 7634831675
Effective search space used: 7634831675
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)