Os10g0415800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acylamino acid-releasing enzyme.
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Os10g0415800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acylamino acid-releasing enzyme.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.06 | 0.385 | 9.88 | -1.25 | 0.417 | 0.573 | 1.1 | -0.433 | -0.211 | 6.6 | 29.87 | 281 | -- | -- |
| 67.35 | 0.382 | 9.88 | -1.24 | 0.407 | 0.598 | 1.04 | -- | -0.204 | 6.76 | 29.62 | 289 | -- | -- |
| 69.87 | 0.389 | 9.88 | -1.24 | 0.405 | 0.595 | -- | -0.206 | -0.215 | 6.88 | 27.17 | 298 | -- | -- |
| 69.86 | 0.389 | 9.87 | -1.21 | 0.376 | 0.634 | -- | -- | -0.201 | 7.1 | 27.18 | 300 | -- | -- |
| 73.62 | 0.4 | 9.88 | -1.13 | -- | 0.777 | -- | 0.0221 | -0.175 | -- | 25.74 | 543 | -- | -- |
| 74.15 | 0.404 | 9.88 | -1.25 | 0.594 | -- | 1 | -- | -0.249 | 5.62 | -- | -- | -- | -- |
| 76.51 | 0.41 | 9.88 | -1.24 | 0.6 | -- | -- | -- | -0.254 | 5.35 | -- | -- | -- | -- |
| 73.42 | 0.399 | 9.88 | -1.18 | -- | 0.822 | -- | -- | -0.194 | -- | 24.71 | 538 | -- | -- |
| 107.84 | 0.484 | 9.85 | -- | 0.278 | 0.683 | -- | -- | -0.0632 | 6.85 | 24.73 | 382 | -- | -- |
| 95.29 | 0.456 | 9.89 | -1.22 | -- | -- | -- | -- | -0.239 | -- | -- | -- | -- | -- |
| 117.28 | 0.507 | 9.85 | -- | 0.579 | -- | -- | -- | -0.116 | 5.43 | -- | -- | -- | -- |
| 108.59 | 0.485 | 9.84 | -- | -- | 0.881 | -- | -- | -0.0212 | -- | 23.38 | 568 | -- | -- |
| 134.76 | 0.542 | 9.86 | -- | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.23 | radiation | 30 | 270 | < th | dose independent | rect. | 23 | 23 |
| 2 | 66.32 | radiation | 40 | 30 | < th | dose independent | rect. | 7 | 15 |
| 3 | 66.56 | humidity | 60 | 270 | < th | dose independent | rect. | 18 | 21 |
| 7 | 66.62 | humidity | 60 | 270 | < th | dose independent | rect. | 9 | 6 |
| 23 | 66.67 | humidity | 60 | 90 | > th | dose independent | rect. | 3 | 23 |
| 24 | 66.67 | radiation | 40 | 30 | < th | dose independent | rect. | 3 | 23 |
| 27 | 66.74 | radiation | 30 | 270 | < th | dose independent | rect. | 12 | 23 |
| 30 | 66.78 | humidity | 60 | 30 | > th | dose independent | rect. | 23 | 23 |
| 31 | 66.80 | radiation | 40 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 32 | 66.81 | radiation | 20 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 33 | 66.84 | humidity | 60 | 270 | < th | dose independent | sin | 4 | NA |
| 35 | 66.84 | radiation | 40 | 30 | < th | dose independent | rect. | 23 | 23 |
| 36 | 66.84 | humidity | 70 | 270 | < th | dose dependent | rect. | 19 | 20 |
| 38 | 66.86 | radiation | 30 | 270 | < th | dose independent | rect. | 15 | 23 |
| 61 | 66.94 | humidity | 70 | 270 | < th | dose dependent | rect. | 9 | 6 |
| 79 | 66.99 | humidity | 60 | 270 | > th | dose independent | rect. | 12 | 23 |
| 80 | 66.99 | humidity | 70 | 270 | < th | dose dependent | sin | 4 | NA |
| 83 | 67.03 | radiation | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 96 | 67.10 | humidity | 60 | 270 | < th | dose independent | rect. | 11 | 3 |
| 109 | 67.15 | radiation | 30 | 270 | < th | dose independent | no | NA | NA |
| 145 | 67.18 | radiation | 40 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 147 | 67.21 | humidity | 60 | 30 | > th | dose independent | rect. | 7 | 15 |
| 176 | 67.26 | radiation | 40 | 270 | > th | dose dependent | sin | 12 | NA |
| 177 | 67.26 | humidity | 70 | 270 | < th | dose dependent | rect. | 11 | 3 |
| 182 | 67.28 | radiation | 20 | 270 | > th | dose dependent | no | NA | NA |
| 184 | 67.28 | radiation | 1 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 185 | 67.28 | radiation | 20 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 343 | 67.33 | temperature | 10 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 366 | 67.36 | radiation | 40 | 270 | > th | dose dependent | no | NA | NA |
| 369 | 67.36 | radiation | 40 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 519 | 67.37 | radiation | 40 | 270 | < th | dose independent | sin | 8 | NA |
| 542 | 67.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 544 | 67.39 | radiation | 40 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 548 | 67.41 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 571 | 67.44 | radiation | 10 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 578 | 67.46 | radiation | 30 | 270 | > th | dose independent | rect. | 15 | 23 |
| 788 | 67.53 | temperature | 20 | 720 | < th | dose independent | rect. | 6 | 1 |
| 789 | 67.53 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 791 | 67.53 | radiation | 30 | 270 | < th | dose independent | rect. | 3 | 19 |
| 795 | 67.54 | radiation | 30 | 720 | > th | dose independent | rect. | 11 | 1 |
| 985 | 67.58 | humidity | 60 | 30 | < th | dose independent | sin | 23 | NA |