BLAST Search Results

BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0415800 Os10g0415800|AK066318
         (782 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G14570.1  | chr4:8362586-8366525 FORWARD LENGTH=765            781   0.0  
AT5G36210.1  | chr5:14248202-14253272 REVERSE LENGTH=731           74   2e-13
AT5G24260.1  | chr5:8234865-8237810 REVERSE LENGTH=747             55   2e-07

>AT4G14570.1 | chr4:8362586-8366525 FORWARD LENGTH=765
          Length = 764

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/776 (52%), Positives = 547/776 (70%), Gaps = 26/776 (3%)

Query: 5   KDNPLGMDALASEEYASQSKLLQEFTNAPSIDGAWVFQTNNEDRSTAMYSISQTNLLANN 64
           K+  +G+D    EEYA+QSKLLQEF N PSID AW+F  N++  S AM+++SQ NLLAN 
Sbjct: 10  KELHVGLDPTTEEEYATQSKLLQEFINIPSIDKAWIF--NSDSGSQAMFALSQANLLANK 67

Query: 65  KRKYILFSHIMRNGTNLLDFQWSPFPIQMDXXXXXXXXXXXXKLLVVRNGEKGSPTKLEI 124
           K+K++L  HI       ++F W+PFPI+M             KLLV+RN E  SPTK EI
Sbjct: 68  KKKFMLSGHISNESNQSVNFHWAPFPIEMTGASAFVPSPSGLKLLVIRNPENESPTKFEI 127

Query: 125 VDQSHVEKEIHVAQSVHGPLYTDEWFHGISWNQEETLIAYIAEDSPEPKPVFDDTGY-RK 183
            + S +EKE H+ Q VHG +Y D WF GISW+ +ET +AY+AE+   PKP FD  GY +K
Sbjct: 128 WNSSQLEKEFHIPQKVHGSVYVDGWFEGISWDSDETHVAYVAEEPSRPKPTFDHLGYYKK 187

Query: 184 EGSSEKDCNNWKGQGDWEEDWGETYSKKGRPSLFVLDINSGEVRAAKGISRSLSVGQVVW 243
           E S +K   +WKG+GDWEE+WGE Y+ K +P+LFV++++SGEV   KGI RS+SVGQVVW
Sbjct: 188 ENSLDKGIGSWKGEGDWEEEWGEAYAGKRQPALFVINVDSGEVEPIKGIPRSISVGQVVW 247

Query: 244 APPSSCGRQKYLIFVGWLEHNGFQNTPRKLGIKYCSNRPCSLYSTLCPFEESDVDNAPAS 303
           +P +S G  +YL+F GWL         RK GIKYC NRPC++Y+     +E   D     
Sbjct: 248 SP-NSNGSAQYLVFAGWL------GDKRKFGIKYCYNRPCAIYAIKFTSDEPKDD----- 295

Query: 304 DSKLEPASVAINLTPSISSAFFPRFSKDGKLLVFLSANRAVDSGAHNATDSLHKINWPSD 363
           D+   P     NLT SISS F PRFSKDGK LVF+SA  AVDSGAH AT+SLH+I+WPSD
Sbjct: 296 DANEFPIH---NLTKSISSGFCPRFSKDGKFLVFVSAKTAVDSGAHWATESLHRIDWPSD 352

Query: 364 WKMDQYLEITDVIPIVMCPQDGCFPGLYCSSMLSNPWLSDRCTMILTSAWRSTEVILSID 423
            K+ +   I DVI +V CP+DGCFPGLY + +LS+PWLSD  +++L++ WRS  VILS++
Sbjct: 353 GKLPESTNIVDVIQVVNCPKDGCFPGLYVTGLLSDPWLSDGHSLMLSTYWRSCRVILSVN 412

Query: 424 VLSGKATRISPENSEYSWSALAVDGHNVLAVSSSPIDPPQIKYGHQVSLKDQTCTWVWDE 483
           +LSG+ +R SP +S+YSW+ALA+DG +++AVSSSP+  P+IKYG +        +W+W  
Sbjct: 413 LLSGEVSRASPSDSDYSWNALALDGDSIVAVSSSPVSVPEIKYGKKGLDSAGKPSWLWSN 472

Query: 484 VNNNPLMAANNKVKALLSHHQFSILKIPVTNPSDDLSDGSKLPFEAIFVSCKDSSHK--- 540
           + +   +  + KV A LS  QF ILK+P+++ S+ L++G+K P EAI+VS   S      
Sbjct: 473 IQSP--IRYSEKVMAGLSSLQFKILKVPISDVSEGLAEGAKNPIEAIYVSSSKSKENGKC 530

Query: 541 -PTILVLHGGPHXXXXXXXXXXXAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGSQD 599
            P I VLHGGPH           A+L+S+G++ LI+NYRG+ G+GE+ALQSLPGKVGSQD
Sbjct: 531 DPLIAVLHGGPHSVSPCSFSRTMAYLSSIGYSQLIINYRGSLGYGEDALQSLPGKVGSQD 590

Query: 600 VQDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLSLM 659
           V+DCL A+D+ IE G+ D S++ V+G SHGGFLTTHLIGQAPD+F+ AAARNPVCN++ M
Sbjct: 591 VKDCLLAVDHAIEMGIADPSRITVLGGSHGGFLTTHLIGQAPDKFVAAAARNPVCNMASM 650

Query: 660 IGTTDIPDWCYAVACGSEGRQHASESPSPDHLRLFYQKSPIAHISKVKAPLLMLLGGADL 719
           +G TDIPDWC+  A G +   H +E+PS + L  F+Q SPI+HISKVK P L LLG  DL
Sbjct: 651 VGITDIPDWCFFEAYGDQ--SHYTEAPSAEDLSRFHQMSPISHISKVKTPTLFLLGTKDL 708

Query: 720 RVPISNGLQYARALRERGGEIRIMMFPDDIHEINIPQSDFESFLNIGVWFKKHLSI 775
           RVPISNG QY RAL+E+G E+++++FP+D H ++ PQ+D+ESFLNI VWF K+  +
Sbjct: 709 RVPISNGFQYVRALKEKGVEVKVLVFPNDNHPLDRPQTDYESFLNIAVWFNKYCKL 764



>AT5G36210.1 | chr5:14248202-14253272 REVERSE LENGTH=731
          Length = 730

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 23/217 (10%)

Query: 539 HKPTILVL-HGGPHXXXXXXXXXXXAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVGS 597
            KP +LV  HGGP             +  S G+  + VNY G+ G+G E  + L  + G 
Sbjct: 490 EKPPLLVKSHGGPTAESRGSLNLNIQYWTSRGWAFVDVNYGGSTGYGREYRERLLRQWGI 549

Query: 598 QDVQDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNLS 657
            DV DC     Y++  G  D  ++ + G S GG+ T   +    D F   A+   V +L 
Sbjct: 550 VDVDDCCGCAKYLVSSGKADVKRLCISGGSAGGYTTLASLAFR-DVFKAGASLYGVADLK 608

Query: 658 LMIGTTDIPDWCYAVACGSEGRQHASESPSPDHL----RLFYQKSPIAHISKVKAPLLML 713
           ++                 EG  H  ES   D+L    + FY++SPI  + K   P+++ 
Sbjct: 609 ML---------------KEEG--HKFESRYIDNLVGDEKDFYERSPINFVDKFSCPIILF 651

Query: 714 LGGADLRVPISNGLQYARALRERGGEIRIMMFPDDIH 750
            G  D  V      +   AL+++G  + ++ +  + H
Sbjct: 652 QGLEDKVVTPDQSRKIYEALKKKGLPVALVEYEGEQH 688



>AT5G24260.1 | chr5:8234865-8237810 REVERSE LENGTH=747
          Length = 746

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 24/216 (11%)

Query: 542 TILVLHGGP-----HXXXXXXXXXXXAFLASLGFNLLIVNYRGTPGFGEEALQSLPGKVG 596
           T++ ++GGP     +            +L S G  +  ++ RGT   G +    +    G
Sbjct: 525 TMINVYGGPSVQLVYDSWINTVDMRTQYLRSRGILVWKLDNRGTARRGLKFESWMKHNCG 584

Query: 597 SQDVQDCLTALDYVIEGGLIDASKVAVIGISHGGFLTTHLIGQAPDRFMVAAARNPVCNL 656
             D +D +T   ++IE GL     + V G S+GG+L+  L+ + P+ F  A +  PV + 
Sbjct: 585 YVDAEDQVTGAKWLIEQGLAKPDHIGVYGWSYGGYLSATLLTRYPEIFNCAVSGAPVTSW 644

Query: 657 SLMIGTTDIPDWCYAVACGSEGRQHASESPSPDHLRLFYQKSPIAHISKV--KAPLLMLL 714
                             G +          P     + + S + H+  +  K  L+++ 
Sbjct: 645 D-----------------GYDSFYTEKYMGLPTEEERYLKSSVMHHVGNLTDKQKLMLVH 687

Query: 715 GGADLRVPISNGLQYARALRERGGEIRIMMFPDDIH 750
           G  D  V   +  +   AL E G    +++FPD+ H
Sbjct: 688 GMIDENVHFRHTARLVNALVEAGKRYELLIFPDERH 723



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,211,541
Number of extensions: 812614
Number of successful extensions: 1671
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1665
Number of HSP's successfully gapped: 4
Length of query: 782
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 676
Effective length of database: 8,200,473
Effective search space: 5543519748
Effective search space used: 5543519748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)