Os10g0415600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acylamino acid-releasing enzyme.
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Os10g0415600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acylamino acid-releasing enzyme.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.86 | 0.239 | 9.18 | 0.0668 | 0.596 | 1.56 | 0.651 | 0.527 | -0.00466 | 14.8 | 31.2 | 281 | -- | -- |
| 26.07 | 0.238 | 9.17 | 0.138 | 0.601 | 1.55 | 0.535 | -- | -0.00476 | 14.7 | 31.9 | 262 | -- | -- |
| 27.1 | 0.242 | 9.17 | 0.165 | 0.608 | 1.57 | -- | 0.0479 | 0.019 | 14.9 | 31.51 | 268 | -- | -- |
| 27 | 0.242 | 9.17 | 0.168 | 0.592 | 1.56 | -- | -- | 0.0056 | 15 | 31.6 | 285 | -- | -- |
| 31.22 | 0.26 | 9.19 | 0.0385 | -- | 1.36 | -- | 0.69 | -0.045 | -- | 31.2 | 955 | -- | -- |
| 55.1 | 0.348 | 9.22 | -0.232 | 0.269 | -- | 0.697 | -- | -0.259 | 11.1 | -- | -- | -- | -- |
| 57.1 | 0.354 | 9.22 | -0.202 | 0.266 | -- | -- | -- | -0.255 | 11.6 | -- | -- | -- | -- |
| 31.66 | 0.262 | 9.18 | 0.157 | -- | 1.36 | -- | -- | -0.0353 | -- | 32.34 | 962 | -- | -- |
| 27.63 | 0.245 | 9.17 | -- | 0.534 | 1.52 | -- | -- | 0.0045 | 15.2 | 31.51 | 330 | -- | -- |
| 61.56 | 0.367 | 9.23 | -0.21 | -- | -- | -- | -- | -0.259 | -- | -- | -- | -- | -- |
| 58.18 | 0.357 | 9.22 | -- | 0.269 | -- | -- | -- | -0.233 | 11.7 | -- | -- | -- | -- |
| 32.36 | 0.265 | 9.18 | -- | -- | 1.29 | -- | -- | -0.0515 | -- | 32.36 | 950 | -- | -- |
| 62.72 | 0.37 | 9.22 | -- | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 8 | 25.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 16 | 26.21 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 21 | 26.36 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 25 | 26.39 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 29 | 26.53 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 34 | 26.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 77 | 27.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 98 | 27.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 99 | 27.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 15 |
| 117 | 27.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 15 |
| 169 | 28.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 187 | 28.11 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 207 | 28.18 | temperature | 30 | 1440 | < th | dose dependent | sin | 9 | NA |
| 221 | 28.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 222 | 28.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 318 | 28.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 9 |