BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0390600 Os10g0390600|AK107029
(487 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0390600 Similar to Alanine aminotransferase 2 (EC 2.6.... 978 0.0
Os10g0390500 Alanine aminotransferase 630 0.0
Os09g0433900 Similar to Alanine aminotransferase 2 (EC 2.6.... 522 e-148
Os07g0617800 Similar to Alanine aminotransferase 449 e-126
Os07g0108300 Similar to Alanine aminotransferase 390 e-108
>Os10g0390600 Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)
(Glutamic--pyruvic transaminase 2) (Glutamic--alanine
transaminase 2) (ALAAT-2)
Length = 487
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/487 (97%), Positives = 475/487 (97%)
Query: 1 MLRAAARALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEIIYCNHSN 60
MLRAAARALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEIIYCNHSN
Sbjct: 1 MLRAAARALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEIIYCNHSN 60
Query: 61 PQSQGQQPNKFFREVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHC 120
PQSQGQQPNKFFREVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHC
Sbjct: 61 PQSQGQQPNKFFREVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHC 120
Query: 121 QGIEGLRDAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMMMHLLIRGKKDGILCPIPSHS 180
QGIEGLRDAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMMMHLLIRGKKDGILCPIPSHS
Sbjct: 121 QGIEGLRDAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMMMHLLIRGKKDGILCPIPSHS 180
Query: 181 LYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIDVRGLVVVNPGNPTGQV 240
LYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIDVRGLVVVNPGNPTGQV
Sbjct: 181 LYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIDVRGLVVVNPGNPTGQV 240
Query: 241 LVEENQCEIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEGDISLVSFH 300
LVEENQCEIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEGDISLVSFH
Sbjct: 241 LVEENQCEIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEGDISLVSFH 300
Query: 301 SVSNXXXXXXXXXXXXMEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDE 360
SVSN MEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDE
Sbjct: 301 SVSNGYYGECGRRGGYMEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDE 360
Query: 361 SYPSYRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEA 420
SYPSYRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEA
Sbjct: 361 SYPSYRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEA 420
Query: 421 MNTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEA 480
MNTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEA
Sbjct: 421 MNTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEA 480
Query: 481 FMEEFRS 487
FMEEFRS
Sbjct: 481 FMEEFRS 487
>Os10g0390500 Alanine aminotransferase
Length = 483
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/482 (64%), Positives = 371/482 (76%), Gaps = 1/482 (0%)
Query: 5 AARALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEIIYCNHSNPQSQ 64
AA ++ V +LNPKVL ++ + G + AQ +QQ+L P S PF EI+YCN NPQS
Sbjct: 2 AAPSVAVDNLNPKVLN-CEYAVRGEIVIHAQRLQQQLQTQPGSLPFDEILYCNIGNPQSL 60
Query: 65 GQQPNKFFREVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHCQGIE 124
GQ+P FFREV+ALC+HP LL++ E +FS+DAI+RA I+ IPG+ TG YSH QGI+
Sbjct: 61 GQKPVTFFREVIALCDHPCLLEKEETKSLFSADAISRATTILASIPGRATGAYSHSQGIK 120
Query: 125 GLRDAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMMMHLLIRGKKDGILCPIPSHSLYTD 184
GLRDAIAAGIASRDG P+ ++DIFLTDGA+ VHMMM LLIR +KDGILCPIP + LY+
Sbjct: 121 GLRDAIAAGIASRDGYPANADDIFLTDGASPGVHMMMQLLIRNEKDGILCPIPQYPLYSA 180
Query: 185 SMVLRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIDVRGLVVVNPGNPTGQVLVEE 244
S+ L G LVPYYL+ES GW + ISDLKKQL+ +R KGIDVR LVV+NPGNPTGQVL EE
Sbjct: 181 SIALHGGALVPYYLNESTGWGLEISDLKKQLEDSRLKGIDVRALVVINPGNPTGQVLAEE 240
Query: 245 NQCEIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEGDISLVSFHSVSN 304
NQ +IV+ CKNE LVLLADEVYQENIY D KKFNSFKK+ARS+GY E D+ LVSF SVS
Sbjct: 241 NQRDIVKFCKNEGLVLLADEVYQENIYVDNKKFNSFKKIARSMGYNEDDLPLVSFQSVSK 300
Query: 305 XXXXXXXXXXXXMEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDESYPS 364
ME+TGFS+ VR ++YKVAS++ CSNI+GQIL SLVMNPPK GD SY S
Sbjct: 301 GYYGECGKRGGYMEITGFSAPVREQIYKVASVNLCSNITGQILASLVMNPPKAGDASYAS 360
Query: 365 YRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEAMNTE 424
Y+AE+D IL SL+ A+A+ + FNS+EG+TCNK EG + +FP + LP +AI+AA+A N
Sbjct: 361 YKAEKDGILQSLARRAKALENAFNSLEGITCNKTEGAMYLFPQLSLPQKAIDAAKAANKA 420
Query: 425 PDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEAFMEE 484
PD FYALRLLE+TGIVVVPGS FGQVPGTWH RCTILPQEEK IISRF FHE FM
Sbjct: 421 PDAFYALRLLEATGIVVVPGSGFGQVPGTWHIRCTILPQEEKIPAIISRFKAFHEGFMAA 480
Query: 485 FR 486
+R
Sbjct: 481 YR 482
>Os09g0433900 Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)
(Glutamic--pyruvic transaminase 2) (Glutamic--alanine
transaminase 2) (ALAAT-2)
Length = 486
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 252/479 (52%), Positives = 340/479 (70%), Gaps = 1/479 (0%)
Query: 8 ALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEIIYCNHSNPQSQGQQ 67
++T ++N KV G +V R A+ +++E+ NP S PF EIIYCN NPQ+ GQ+
Sbjct: 8 SITAETINQKVRIFTYEPCGEIV-RHARRLEKEIYENPGSLPFQEIIYCNLGNPQALGQR 66
Query: 68 PNKFFREVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHCQGIEGLR 127
P FFREVL+LC++P L+DR EA +FS A+ RAR+I+ +PG+ +G Y+ QG+ GLR
Sbjct: 67 PINFFREVLSLCDNPSLIDRDEARALFSPCALKRARKIIESLPGRDSGSYTSSQGVRGLR 126
Query: 128 DAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMMMHLLIRGKKDGILCPIPSHSLYTDSMV 187
+A+A GIA+RDG PS ++IFLTDGA++ ++MMM +LIR +DGILCP+P + LY+ S++
Sbjct: 127 EAVADGIAARDGFPSKPDNIFLTDGASSAINMMMQILIRSHEDGILCPLPEYPLYSASII 186
Query: 188 LRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIDVRGLVVVNPGNPTGQVLVEENQC 247
L G T+VPY L E W + I ++K+ L+ ARA G+ +R +VV+NPGNPTGQVL NQ
Sbjct: 187 LHGGTMVPYNLTEDSIWGLEIFEVKRCLEDARASGLTIRAMVVINPGNPTGQVLSITNQE 246
Query: 248 EIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEGDISLVSFHSVSNXXX 307
EIVE C+ E LV+LADEVYQEN+YT+ K+FNSFKKVARS+GY D+S+VSFHSVS
Sbjct: 247 EIVEFCRKEGLVILADEVYQENVYTENKRFNSFKKVARSLGYDHHDLSIVSFHSVSMGYY 306
Query: 308 XXXXXXXXXMEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDESYPSYRA 367
ME+ GF +V E+YK+ASL+ C NI+GQIL+SLVM+PPK+GDE++ +
Sbjct: 307 GECGRRGGYMEICGFGDDVIDEMYKLASLTICPNIAGQILISLVMDPPKLGDEAFEIFMV 366
Query: 368 ERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEAMNTEPDV 427
E++ SSL A+A+ FN +EG++CNK EG + +FP +RLP AI+AA+ PDV
Sbjct: 367 EKEETYSSLLKRAKALQKAFNGLEGVSCNKFEGAMYLFPRLRLPQAAIKAAQLEGVSPDV 426
Query: 428 FYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEAFMEEFR 486
FYA RLL++TGI VVPGS F V GT H RCTILP EE ++ FHEAFM+EFR
Sbjct: 427 FYAHRLLDATGIAVVPGSGFHPVSGTSHIRCTILPGEETITAMVPSLQAFHEAFMDEFR 485
>Os07g0617800 Similar to Alanine aminotransferase
Length = 329
Score = 449 bits (1155), Expect = e-126, Method: Compositional matrix adjust.
Identities = 212/328 (64%), Positives = 257/328 (78%)
Query: 159 MMMHLLIRGKKDGILCPIPSHSLYTDSMVLRGATLVPYYLDESRGWSVNISDLKKQLDGA 218
MMM LLIR + DGILCPIP + LY+ S+ L G +LVPY+LDE GW + + +LKKQL+ A
Sbjct: 1 MMMQLLIRSENDGILCPIPQYPLYSASIALHGGSLVPYFLDEETGWGLEVDELKKQLEEA 60
Query: 219 RAKGIDVRGLVVVNPGNPTGQVLVEENQCEIVELCKNECLVLLADEVYQENIYTDQKKFN 278
++KGI VR LVV+NPGNPTGQVL EENQ +IVE CKNE LVLLADEVYQENIY + KKF+
Sbjct: 61 QSKGITVRALVVINPGNPTGQVLAEENQKKIVEFCKNEGLVLLADEVYQENIYVEDKKFH 120
Query: 279 SFKKVARSIGYGEGDISLVSFHSVSNXXXXXXXXXXXXMEVTGFSSEVRGEVYKVASLSA 338
SFKK+ARS+GY + D+ LVSF SVS MEVTGFS++VR ++YKVAS++
Sbjct: 121 SFKKIARSMGYTDDDLPLVSFQSVSKGYYGECGKRGGYMEVTGFSADVREQIYKVASVNL 180
Query: 339 CSNISGQILMSLVMNPPKVGDESYPSYRAERDSILSSLSCCAEAMVSTFNSMEGMTCNKA 398
CSN+SGQIL SL+MNPPK GDESY S+ E+D ILSSL+ A+A+ FNS+EG+TCNKA
Sbjct: 181 CSNVSGQILASLIMNPPKAGDESYESFMVEKDGILSSLARRAKALEEAFNSLEGITCNKA 240
Query: 399 EGGISVFPSVRLPPRAIEAAEAMNTEPDVFYALRLLESTGIVVVPGSVFGQVPGTWHFRC 458
EG + +FP + LP +AI AA+A T PD +YA RLLE+TGIVVVPGS FGQVPGTWHFRC
Sbjct: 241 EGAMYLFPRIYLPQKAIGAAQAAGTAPDAYYARRLLEATGIVVVPGSGFGQVPGTWHFRC 300
Query: 459 TILPQEEKTRQIISRFNVFHEAFMEEFR 486
TILPQE+K IIS+F FHE FM+EFR
Sbjct: 301 TILPQEDKIPAIISKFKEFHEKFMDEFR 328
>Os07g0108300 Similar to Alanine aminotransferase
Length = 485
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/480 (43%), Positives = 288/480 (60%), Gaps = 12/480 (2%)
Query: 7 RALTVSSLNPKVLALADHHLGGLVARRAQSMQQELDANPASHPFSEIIYCNHSNPQSQGQ 66
+ L LN V + + + G + RA +Q+E +II+ N NP + GQ
Sbjct: 11 KPLDYEELNENVKKV-QYAVRGELYLRASELQKE---------GKKIIFTNVGNPHALGQ 60
Query: 67 QPNKFFREVLALCNHPHLLDRSEASFMFSSDAITRAREIVGFIPGKTTGGYSHCQGIEGL 126
+P F R+V+ALC P LLD +F +DAI RA+ + PG G YS +GI G+
Sbjct: 61 KPLTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLAMAPG-GLGAYSDSRGIPGI 119
Query: 127 RDAIAAGIASRDGLPSYSEDIFLTDGAAAPVHMMMHLLIRGKKDGILCPIPSHSLYTDSM 186
R +A I RDG PS E I+LTDGA+ V M++ +IR ++DGIL P+P + LY+ ++
Sbjct: 120 RKEVAEFIERRDGYPSDPELIYLTDGASKGVMQMLNTIIRNERDGILVPVPQYPLYSAAI 179
Query: 187 VLRGATLVPYYLDESRGWSVNISDLKKQLDGARAKGIDVRGLVVVNPGNPTGQVLVEENQ 246
L G +LVPYYL+E W ++ +L++ + AR+KGI VR +V++NPGNPTGQ L E N
Sbjct: 180 SLFGGSLVPYYLEEEANWGLDFVNLRQTVASARSKGITVRAMVIINPGNPTGQCLSEGNI 239
Query: 247 CEIVELCKNECLVLLADEVYQENIYTDQKKFNSFKKVARSIGYGEG-DISLVSFHSVSNX 305
E+++ C +E LVLLADEVYQ+NIY D++ F S +KV +G ++ LVSFH+VS
Sbjct: 240 KELLKFCFHENLVLLADEVYQQNIYQDERPFISARKVLFDMGPPMSREVQLVSFHTVSKG 299
Query: 306 XXXXXXXXXXXMEVTGFSSEVRGEVYKVASLSACSNISGQILMSLVMNPPKVGDESYPSY 365
E+T + E+YKVAS++ N+ GQI M L++NPPK GD SY +
Sbjct: 300 YWGECGQRGGYFEMTNLPPKTVDEIYKVASIALSPNVPGQIFMGLMVNPPKPGDISYLKF 359
Query: 366 RAERDSILSSLSCCAEAMVSTFNSMEGMTCNKAEGGISVFPSVRLPPRAIEAAEAMNTEP 425
AE SIL SL A M FNS + CN EG + FP +RLPP+AI+AA+
Sbjct: 360 SAESKSILESLRRRARLMTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIDAAKRAGKAA 419
Query: 426 DVFYALRLLESTGIVVVPGSVFGQVPGTWHFRCTILPQEEKTRQIISRFNVFHEAFMEEF 485
DVFY L+LLE+TGI VPGS FGQ G +H R TILP EE I++ F F++ FM+++
Sbjct: 420 DVFYCLKLLEATGISTVPGSGFGQKEGVFHLRTTILPAEEDMPAIMTSFKKFNDTFMDQY 479
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,789,076
Number of extensions: 634315
Number of successful extensions: 1373
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1377
Number of HSP's successfully gapped: 5
Length of query: 487
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 382
Effective length of database: 11,553,331
Effective search space: 4413372442
Effective search space used: 4413372442
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)