BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0567300 Os09g0567300|AK071558
(435 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0567300 Similar to Monodehydroascorbate reductase (EC ... 818 0.0
Os08g0557600 Similar to Monodehydroascorbate reductase (EC ... 719 0.0
Os02g0707100 Similar to Monodehydroascorbate reductase, see... 427 e-120
Os08g0151800 Pyridine nucleotide-disulphide oxidoreductase,... 334 8e-92
Os02g0707000 Similar to Monodehydroascorbate reductase (EC ... 179 3e-45
AK110799 69 9e-12
>Os09g0567300 Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)
(Ascorbate free radical reductase) (AFR reductase)
Length = 435
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/435 (96%), Positives = 419/435 (96%)
Query: 1 MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKGYLFPQN 60
MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKGYLFPQN
Sbjct: 1 MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKGYLFPQN 60
Query: 61 AARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILI 120
AARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILI
Sbjct: 61 AARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILI 120
Query: 121 IATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQXXXXXXXXXXXXXXXXLELS 180
IATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQ LELS
Sbjct: 121 IATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQAKKGGKAVIVGGGYIGLELS 180
Query: 181 AALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDV 240
AALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDV
Sbjct: 181 AALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDV 240
Query: 241 TAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVA 300
TAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVA
Sbjct: 241 TAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVA 300
Query: 301 TFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFY 360
TFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFY
Sbjct: 301 TFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFY 360
Query: 361 GDNVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVAN 420
GDNVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVAN
Sbjct: 361 GDNVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVAN 420
Query: 421 IEELKKEGLQFASKI 435
IEELKKEGLQFASKI
Sbjct: 421 IEELKKEGLQFASKI 435
>Os08g0557600 Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)
(Ascorbate free radical reductase) (AFR reductase)
Length = 435
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/435 (81%), Positives = 393/435 (90%)
Query: 1 MASEKHFKYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKGYLFPQN 60
MA+ KHF YVILGGGVAAGYAAREFAKQGVKPGELAIISKE+VAPYERPALSKGYLFPQN
Sbjct: 1 MAAAKHFTYVILGGGVAAGYAAREFAKQGVKPGELAIISKESVAPYERPALSKGYLFPQN 60
Query: 61 AARLPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILI 120
AARLPGFH CVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTS+ ATFTY+ L+
Sbjct: 61 AARLPGFHTCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSSADATFTYDTLL 120
Query: 121 IATGSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQXXXXXXXXXXXXXXXXLELS 180
IATGSSVIKL+DFG QGA++N+ILYLR+++DADKLVAA+Q LELS
Sbjct: 121 IATGSSVIKLTDFGVQGAEANDILYLRDIEDADKLVAAMQAKKDGKAVIVGGGYIGLELS 180
Query: 181 AALKINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDV 240
AALK N+FDVTMV+PEPWCMPRLFT+ +AAFYE YY NKG+ I+KGTVAVGFDADANGDV
Sbjct: 181 AALKTNNFDVTMVYPEPWCMPRLFTSGLAAFYEGYYANKGIHIIKGTVAVGFDADANGDV 240
Query: 241 TAVNLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVA 300
TAV LKNG+VLEADIV+VGVGGRPLT LFKGQVAEEKGGIKTDAFFETSVPGVYA+ DVA
Sbjct: 241 TAVKLKNGNVLEADIVIVGVGGRPLTHLFKGQVAEEKGGIKTDAFFETSVPGVYAIADVA 300
Query: 301 TFPMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFY 360
FPMK+YNE+RRVEHVDHARKSAEQAVKAIK KE+GESV EYDYLPYFYSRSFDL WQFY
Sbjct: 301 AFPMKLYNEIRRVEHVDHARKSAEQAVKAIKAKEAGESVPEYDYLPYFYSRSFDLSWQFY 360
Query: 361 GDNVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVAN 420
GDNVG+ +LFGD+DPT+AKPKFGSYWIKDGKV+G FLEGGS +EN+ IAKVA+ QPPVA+
Sbjct: 361 GDNVGEDVLFGDNDPTAAKPKFGSYWIKDGKVVGVFLEGGSAEENQVIAKVARAQPPVAD 420
Query: 421 IEELKKEGLQFASKI 435
+E LKKEGL FA+K+
Sbjct: 421 VEALKKEGLDFAAKV 435
>Os02g0707100 Similar to Monodehydroascorbate reductase, seedling isozyme (EC
1.6.5.4) (MDAR seedling) (Ascorbate free radical
reductase seedling) (AFR reductase seedling)
Length = 476
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/430 (53%), Positives = 298/430 (69%), Gaps = 7/430 (1%)
Query: 5 KHFKYVILGGGVAAGYAAREFAKQG-VKPGELAIISKEAVAPYERPALSKGYLFPQNAAR 63
+ F +VILGGGVAAGYAA EFA++G GEL IIS+E VAPYERPALSKGYL P+ AAR
Sbjct: 3 RAFVHVILGGGVAAGYAALEFARRGGYSRGELCIISEETVAPYERPALSKGYLLPEGAAR 62
Query: 64 LPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILIIAT 123
LPGFH CVG+ E L +WY E GIEL+L T+++ AD+ KTL +A G T +Y+ LIIAT
Sbjct: 63 LPGFHTCVGANDELLTAKWYKENGIELVLGTKVITADVRMKTLLTATGETISYKNLIIAT 122
Query: 124 GSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQXXXXXXXXXXXXXXXXLELSAAL 183
G+ +KL +FG G+D++NI YLR +DDADKLV ++ +E +AAL
Sbjct: 123 GARALKLEEFGISGSDASNICYLRNLDDADKLVNVMKSCPGGNAVVIGGGYIGMECAAAL 182
Query: 184 KINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDVTAV 243
N VTMVFPE CM RLFT IA +YE+YYT+KGV VKGTV F+ D+ G VT+V
Sbjct: 183 VTNRIKVTMVFPESHCMARLFTPKIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVTSV 242
Query: 244 NLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVATFP 303
LK+G L AD+VVVG+G R T LF+GQ+ E+GGIK + TS VYAVGDVA FP
Sbjct: 243 ILKDGKHLPADMVVVGIGIRASTGLFEGQLLMEQGGIKVNGQMLTSDGSVYAVGDVAAFP 302
Query: 304 MKMYNE-LRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFYGD 362
+K+++ +RR+EHVD AR++A AV AI + + DYLP+FYSR F L WQFYG+
Sbjct: 303 IKLFDGVIRRLEHVDSARRTARHAVAAILEPSKTKDI---DYLPFFYSRVFTLSWQFYGN 359
Query: 363 NVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVANIE 422
N G+ + FGD T++ P+FG+YW+ ++ GAFLEGGS +E +AI+ V + + V NI
Sbjct: 360 NTGEVVHFGDF--TNSSPRFGAYWVDKSRIRGAFLEGGSREEYEAISNVVRRKAKVINIA 417
Query: 423 ELKKEGLQFA 432
EL+K+GL FA
Sbjct: 418 ELEKQGLMFA 427
>Os08g0151800 Pyridine nucleotide-disulphide oxidoreductase, class I family
protein
Length = 491
Score = 334 bits (856), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 192/422 (45%), Positives = 262/422 (62%), Gaps = 24/422 (5%)
Query: 8 KYVILGGGVAAGYAAREFAKQGVKPGELAIISKEAVAPYERPALSKGYLFP--QNAARLP 65
+YVI+GGG AAGYAAR F + G+ G L I+SKEA PYERPAL+KGYLFP + ARLP
Sbjct: 55 EYVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYPPYERPALTKGYLFPPDKKPARLP 114
Query: 66 GFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILIIATGS 125
GFH CVGSGG+R EWY E GIE++ +V D + TL ++ G Y LII+TG
Sbjct: 115 GFHTCVGSGGQRQTAEWYKENGIEVLYEDPVVAFDGKTHTLKTSSGKILKYGSLIISTGC 174
Query: 126 SVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQXXXXXXXXXXXXXXXXLELSAALKI 185
+L G + + Y+R+V DAD LV+++ +E++AA
Sbjct: 175 EASRLP--AKIGGNLPGVHYIRDVADADSLVSSL--GKAKKIVVIGGGYIGMEVAAAACG 230
Query: 186 NDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDVTAVNL 245
+ D T++FPE MPRLFT +A YE Y GVK +KG + +A ++G V++ L
Sbjct: 231 WNLDTTIIFPEDHIMPRLFTPSLAKKYEELYQQNGVKFIKGALIDKLEAGSDGRVSSAVL 290
Query: 246 KNGSVLEADIVVVGVGGRPLTTLFKG-QVAEEKGGIKTDAFFETSVPGVYAVGDVATFPM 304
++GSV+EAD V+VG+G RP+ F+ V + GGI+ D+ F TS+PG++A+GDVA FP+
Sbjct: 291 EDGSVVEADTVIVGIGARPVIGPFEAVGVNTKVGGIEVDSLFRTSIPGIFAIGDVAAFPL 350
Query: 305 KMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFD-------LGW 357
KMY+ + RVEHVDHARKSA V+A+ + YDYLPYFYSR F+ + W
Sbjct: 351 KMYDRMTRVEHVDHARKSAHHCVEALLTSHTK----PYDYLPYFYSRVFEYEGSSRKIWW 406
Query: 358 QFYGDNVGDTILFGDSDPTSAKPKFGSYWI-KDGKVLGAFLEGGSPDENKAIAKVAKTQP 416
QFYGDNVG+TI G S +PK ++WI D ++ G FLE GS +E + ++AK+QP
Sbjct: 407 QFYGDNVGETIEVG-----SFEPKIATFWIDSDSRLKGVFLESGSSEEFSLLPQLAKSQP 461
Query: 417 PV 418
V
Sbjct: 462 VV 463
>Os02g0707000 Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)
(Ascorbate free radical reductase) (AFR reductase)
Length = 232
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 127/189 (67%), Gaps = 7/189 (3%)
Query: 251 LEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVATFPMKMYN-E 309
L AD+VVVGVG R T LF GQ+ E GGIK + + S VYAVGDVA FP+K++ +
Sbjct: 3 LPADMVVVGVGARANTGLFDGQLVMENGGIKVNGRMQASDASVYAVGDVAAFPVKLFGGD 62
Query: 310 LRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFYGDNVGDTIL 369
+RR+EHVD AR++A AV A+ E SV DYLP+FYSR F L WQFYGDN G+ +
Sbjct: 63 VRRLEHVDCARRTARHAVAAML--EGTGSVGHIDYLPFFYSRVFSLSWQFYGDNAGEAVH 120
Query: 370 FGD----SDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVANIEELK 425
FGD D A PKFG+YW++DG+V GAFLEGGS E +A+A + VA++ EL+
Sbjct: 121 FGDLAPPGDGDGAAPKFGAYWVRDGRVAGAFLEGGSRQEYEAVAAAVRRGAAVADVAELE 180
Query: 426 KEGLQFASK 434
+ GL FA++
Sbjct: 181 RRGLAFATQ 189
>AK110799
Length = 587
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 142/344 (41%), Gaps = 41/344 (11%)
Query: 82 WYSEKGIELILSTEIVKA-----DLASKTLTSAVGATFTYEILIIATGSSVIKLSDFGTQ 136
W S+ ++ +L ++ A D +K++T G YE L++ATG + ++
Sbjct: 227 WRSKAHLDNVLGVQLENATVTAVDAKAKSVTLDNGRKLEYENLVLATGGTPKRIP---IP 283
Query: 137 GADSNNILYLREVDDADKLVAAI-----QXXXXXXXXXXXXXXXXLELSAALKINDFDVT 191
GAD N+L LR++ D + A+ + +E + AL +V+
Sbjct: 284 GADLPNVLVLRQISDTKAINEAVGNEDGEASNKKNVVVIGSSFIGMEAAIAL-TKRANVS 342
Query: 192 MVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDVTAVNLKNGS-- 249
+V E R+ + G+K D ++ AV +KN
Sbjct: 343 VVGMEKVPFERVLGEQVGGGLMKAQIKNGLKFYMEAGVSRIDGESGSGPKAVVIKNSEGK 402
Query: 250 --VLEADIVVVGVGGRPLTTLFK--GQVAEEKGGIKTDAFFETSVPG---VYAVGDVATF 302
L AD+V++GVG P+T K G E+ GGI D+ V G ++A+GD+A
Sbjct: 403 EESLPADVVILGVGAAPVTDFLKESGFQLEKDGGIAVDSKLR--VEGHRDIFAIGDIAAA 460
Query: 303 PMKMYNELRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQF-YG 361
P + R+EH + A K + G E+ +YD + F+S LG Q Y
Sbjct: 461 PTRASPH-SRIEHWNVASNQGRAVAKTLAGTET-----DYDKVAIFWSA---LGSQLRYC 511
Query: 362 DNVGDTILFGDSDPTSAKP---KFGSYWIKDGKVLGAFLEGGSP 402
+ G D+ + KP KF +Y+ K +V+ G P
Sbjct: 512 GSGGPQF---DTVHVNGKPEELKFSAYYAKGDEVVAVATMGVDP 552
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,000,950
Number of extensions: 569008
Number of successful extensions: 1301
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1281
Number of HSP's successfully gapped: 6
Length of query: 435
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 331
Effective length of database: 11,605,545
Effective search space: 3841435395
Effective search space used: 3841435395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)