Os02g0707000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase).
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Os02g0707000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 108.37 | 0.489 | 9.39 | 0.246 | 0.296 | -1.41 | -0.128 | -1.63 | 0.000178 | 4.38 | 21.72 | 1237 | -- | -- |
| 111.57 | 0.492 | 9.35 | 0.6 | 0.287 | -1.26 | -0.601 | -- | 0.0964 | 3.04 | 22 | 1036 | -- | -- |
| 106.04 | 0.48 | 9.39 | 0.165 | 0.303 | -1.3 | -- | -1.52 | 0.0069 | 3.76 | 22.02 | 1105 | -- | -- |
| 112.15 | 0.493 | 9.34 | 0.636 | 0.302 | -1.26 | -- | -- | 0.113 | 3.55 | 22.01 | 1073 | -- | -- |
| 111.09 | 0.491 | 9.39 | 0.159 | -- | -1.25 | -- | -1.5 | -0.00424 | -- | 22.08 | 1060 | -- | -- |
| 173.05 | 0.617 | 9.43 | 0.177 | 0.229 | -- | 0.491 | -- | -0.294 | 7.13 | -- | -- | -- | -- |
| 173.4 | 0.617 | 9.43 | 0.184 | 0.245 | -- | -- | -- | -0.297 | 6.03 | -- | -- | -- | -- |
| 117.13 | 0.504 | 9.34 | 0.626 | -- | -1.21 | -- | -- | 0.104 | -- | 22.05 | 1032 | -- | -- |
| 121.54 | 0.513 | 9.36 | -- | 0.299 | -1.1 | -- | -- | 0.00458 | 3.48 | 22.11 | 1020 | -- | -- |
| 176.49 | 0.621 | 9.43 | 0.191 | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
| 174.29 | 0.618 | 9.43 | -- | 0.247 | -- | -- | -- | -0.317 | 5.99 | -- | -- | -- | -- |
| 126.34 | 0.524 | 9.37 | -- | -- | -1.05 | -- | -- | -0.0114 | -- | 22.09 | 884 | -- | -- |
| 177.46 | 0.622 | 9.44 | -- | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 110.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 3 | 112.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 4 | 112.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 26 | 116.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 27 | 116.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 64 | 117.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 75 | 117.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 148 | 117.90 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 154 | 117.93 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 158 | 117.93 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 173 | 118.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 194 | 118.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 21 |
| 244 | 118.57 | wind | 9 | 14400 | > th | dose independent | rect. | 6 | 7 |
| 278 | 118.84 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 307 | 119.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 375 | 119.42 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 385 | 119.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 401 | 119.54 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 414 | 119.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 469 | 119.87 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 496 | 119.99 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 552 | 120.21 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 553 | 120.21 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 576 | 120.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 799 | 121.26 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 838 | 121.39 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 996 | 122.07 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |