Os02g0707100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling).
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Os02g0707100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monodehydroascorbate reductase, seedling isozyme (EC 1.6.5.4) (MDAR seedling) (Ascorbate free radical reductase seedling) (AFR reductase seedling).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.02 | 0.364 | 12.4 | -0.898 | 1.16 | -0.685 | 0.22 | 0.477 | -0.647 | 6.3 | 92.2 | 487 | -- | -- |
| 60.04 | 0.361 | 12.4 | -0.866 | 1.19 | -0.726 | 0.417 | -- | -0.648 | 6.23 | 92.2 | 409 | -- | -- |
| 60.01 | 0.361 | 12.4 | -0.89 | 1.16 | -0.694 | -- | 0.586 | -0.643 | 6.21 | 92.57 | 423 | -- | -- |
| 60.44 | 0.362 | 12.4 | -0.87 | 1.19 | -0.741 | -- | -- | -0.649 | 6.15 | 92.57 | 402 | -- | -- |
| 108.9 | 0.486 | 12.4 | -0.93 | -- | -0.619 | -- | 0.679 | -0.63 | -- | 91.86 | 7048 | -- | -- |
| 66 | 0.381 | 12.4 | -0.907 | 0.982 | -- | 0.143 | -- | -0.543 | 6.13 | -- | -- | -- | -- |
| 66.05 | 0.381 | 12.4 | -0.906 | 0.983 | -- | -- | -- | -0.544 | 6.11 | -- | -- | -- | -- |
| 109.85 | 0.488 | 12.4 | -0.82 | -- | -0.604 | -- | -- | -0.61 | -- | 91.47 | 7066 | -- | -- |
| 79.69 | 0.416 | 12.4 | -- | 1.21 | -0.774 | -- | -- | -0.562 | 6.23 | 92 | 401 | -- | -- |
| 116.13 | 0.504 | 12.4 | -0.878 | -- | -- | -- | -- | -0.522 | -- | -- | -- | -- | -- |
| 87.68 | 0.438 | 12.3 | -- | 0.97 | -- | -- | -- | -0.443 | 6.15 | -- | -- | -- | -- |
| 125.86 | 0.523 | 12.4 | -- | -- | -0.756 | -- | -- | -0.569 | -- | 89.39 | 7041 | -- | -- |
| 136.47 | 0.545 | 12.4 | -- | -- | -- | -- | -- | -0.425 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.51 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 22 | 21 |
| 3 | 58.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 6 | 58.82 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 16 |
| 7 | 58.85 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 19 | 3 |
| 8 | 58.86 | temperature | 30.0 | 10 | < th | dose independent | rect. | 12 | 7 |
| 10 | 58.86 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 19 | 19 |
| 11 | 58.87 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 12 | 58.90 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 18 | 58.99 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 18 | 7 |
| 21 | 59.03 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 13 | 6 |
| 24 | 59.04 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 3 |
| 28 | 59.10 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 16 |
| 36 | 59.19 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 13 | 19 |
| 47 | 59.25 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 22 | 21 |
| 48 | 59.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 60 | 59.30 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 17 | 4 |
| 62 | 59.31 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 13 | 10 |
| 66 | 59.34 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 18 |
| 75 | 59.40 | radiation | 40.0 | 30 | < th | dose independent | rect. | 19 | 16 |
| 78 | 59.41 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 84 | 59.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 19 | 3 |
| 85 | 59.44 | wind | 9.0 | 30 | < th | dose independent | rect. | 19 | 3 |
| 86 | 59.44 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 3 |
| 88 | 59.44 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 3 |
| 89 | 59.44 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 3 |
| 91 | 59.44 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 3 |
| 92 | 59.44 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 19 | 3 |
| 94 | 59.44 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 3 |
| 99 | 59.44 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 21 |
| 100 | 59.44 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 101 | 59.44 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 3 |
| 112 | 59.46 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 127 | 59.47 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 19 |
| 135 | 59.48 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 19 | 3 |
| 136 | 59.48 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 19 | 3 |
| 137 | 59.48 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 150 | 59.52 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 14 |
| 165 | 59.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 172 | 59.59 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 12 | 22 |
| 185 | 59.66 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 196 | 59.69 | wind | 1.0 | 10 | > th | dose dependent | rect. | 1 | 18 |
| 205 | 59.72 | wind | 7.0 | 10 | < th | dose independent | rect. | 19 | 19 |
| 209 | 59.73 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 21 |
| 214 | 59.74 | wind | 1.0 | 10 | > th | dose dependent | rect. | 5 | 14 |
| 218 | 59.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 6 |
| 219 | 59.75 | wind | 1.0 | 10 | > th | dose dependent | rect. | 22 | 21 |
| 222 | 59.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 21 |
| 223 | 59.77 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 18 | 2 |
| 226 | 59.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 21 |
| 235 | 59.81 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 22 | 12 |
| 248 | 59.83 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 7 |
| 255 | 59.86 | temperature | 10.0 | 30 | > th | dose dependent | sin | 7 | NA |
| 257 | 59.86 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 19 | 16 |
| 259 | 59.87 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 14 |
| 262 | 59.87 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 19 |
| 270 | 59.90 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 12 | 11 |
| 289 | 59.94 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 292 | 59.94 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 298 | 59.95 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 300 | 59.95 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 301 | 59.96 | wind | 7.0 | 10 | < th | dose independent | rect. | 19 | 17 |
| 317 | 59.99 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 321 | 60.00 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 330 | 60.01 | wind | 9.0 | 10 | < th | dose dependent | rect. | 19 | 18 |
| 342 | 60.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 357 | 60.07 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 359 | 60.08 | wind | 9.0 | 30 | < th | dose independent | rect. | 22 | 21 |
| 365 | 60.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 3 |
| 374 | 60.12 | humidity | 60.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 384 | 60.13 | wind | 9.0 | 10 | < th | dose dependent | rect. | 19 | 3 |
| 393 | 60.15 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 14 |
| 394 | 60.15 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 399 | 60.16 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 11 | 8 |
| 404 | 60.17 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 10 |
| 406 | 60.17 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 6 |
| 411 | 60.18 | radiation | 1.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 417 | 60.19 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 9 |
| 425 | 60.21 | temperature | 15.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 434 | 60.22 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 17 |
| 451 | 60.24 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 10 |
| 461 | 60.26 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 16 |
| 465 | 60.26 | wind | 1.0 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 466 | 60.26 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 12 |
| 469 | 60.27 | temperature | 15.0 | 10 | > th | dose independent | rect. | 19 | 6 |
| 494 | 60.30 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 495 | 60.30 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 15 |
| 501 | 60.30 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 504 | 60.31 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 22 | 21 |
| 505 | 60.32 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 13 | 19 |
| 526 | 60.34 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 22 | 21 |
| 533 | 60.36 | temperature | 15.0 | 90 | > th | dose independent | rect. | 18 | 19 |
| 534 | 60.36 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 22 |
| 544 | 60.37 | humidity | 90.0 | 90 | < th | dose independent | rect. | 6 | 7 |
| 546 | 60.37 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 21 |
| 549 | 60.37 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 22 | 10 |
| 563 | 60.39 | humidity | 60.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 570 | 60.40 | temperature | 20.0 | 30 | > th | dose independent | rect. | 8 | 14 |
| 588 | 60.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 604 | 60.43 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 606 | 60.44 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 612 | 60.45 | humidity | 90.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 618 | 60.45 | wind | 1.0 | 10 | > th | dose dependent | rect. | 11 | 8 |
| 621 | 60.45 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 13 | 11 |
| 640 | 60.47 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 13 | 5 |
| 641 | 60.47 | wind | 1.0 | 720 | > th | dose independent | rect. | 23 | 6 |
| 642 | 60.47 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 647 | 60.47 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 19 | 10 |
| 687 | 60.52 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 19 | 6 |
| 704 | 60.54 | radiation | 1.0 | 90 | < th | dose independent | sin | 17 | NA |
| 712 | 60.54 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 19 | 6 |
| 713 | 60.54 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 15 | 11 |
| 719 | 60.55 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 2 |
| 764 | 60.60 | radiation | 1.0 | 90 | > th | dose independent | sin | 18 | NA |
| 780 | 60.61 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 785 | 60.62 | temperature | 15.0 | 30 | > th | dose independent | rect. | 19 | 14 |
| 797 | 60.63 | wind | 1.0 | 720 | > th | dose independent | rect. | 23 | 4 |
| 798 | 60.63 | humidity | 90.0 | 10 | < th | dose independent | rect. | 19 | 14 |
| 804 | 60.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 808 | 60.64 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 20 |
| 809 | 60.64 | wind | 1.0 | 30 | > th | dose dependent | rect. | 19 | 3 |
| 820 | 60.65 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 22 | 10 |
| 838 | 60.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 841 | 60.66 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 842 | 60.66 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 21 |
| 856 | 60.67 | temperature | 30.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 861 | 60.68 | humidity | 90.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 863 | 60.68 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 865 | 60.68 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 23 | 10 |
| 875 | 60.69 | wind | 3.0 | 10 | > th | dose independent | rect. | 9 | 10 |
| 880 | 60.69 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 19 | 3 |
| 898 | 60.70 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 10 |
| 901 | 60.70 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 22 | 21 |
| 914 | 60.72 | humidity | 90.0 | 720 | > th | dose independent | rect. | 22 | 3 |
| 916 | 60.72 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 6 |
| 918 | 60.72 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 924 | 60.73 | humidity | 60.0 | 90 | > th | dose independent | rect. | 13 | 5 |
| 925 | 60.73 | humidity | 70.0 | 10 | > th | dose independent | rect. | 22 | 10 |
| 944 | 60.74 | humidity | 90.0 | 90 | < th | dose independent | rect. | 24 | 13 |
| 946 | 60.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 947 | 60.74 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 19 | 16 |
| 948 | 60.74 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 18 |
| 952 | 60.74 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 19 | 3 |
| 958 | 60.74 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 19 | 16 |
| 960 | 60.74 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 962 | 60.75 | humidity | 60.0 | 10 | > th | dose independent | rect. | 14 | 5 |
| 974 | 60.76 | wind | 1.0 | 10 | > th | dose independent | rect. | 19 | 6 |
| 975 | 60.76 | radiation | 30.0 | 10 | < th | dose independent | rect. | 22 | 10 |