BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0707100 Os02g0707100|AK065585
(476 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0707100 Similar to Monodehydroascorbate reductase, see... 928 0.0
Os09g0567300 Similar to Monodehydroascorbate reductase (EC ... 456 e-128
Os08g0557600 Similar to Monodehydroascorbate reductase (EC ... 444 e-125
Os08g0151800 Pyridine nucleotide-disulphide oxidoreductase,... 339 3e-93
Os02g0707000 Similar to Monodehydroascorbate reductase (EC ... 258 5e-69
AK110799 95 1e-19
>Os02g0707100 Similar to Monodehydroascorbate reductase, seedling isozyme (EC
1.6.5.4) (MDAR seedling) (Ascorbate free radical
reductase seedling) (AFR reductase seedling)
Length = 476
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/476 (95%), Positives = 453/476 (95%)
Query: 1 MGRAFVHVILXXXXXXXXXXLEFARRGGYSRGELCIISEETVAPYERPALSKGYLLPEGA 60
MGRAFVHVIL LEFARRGGYSRGELCIISEETVAPYERPALSKGYLLPEGA
Sbjct: 1 MGRAFVHVILGGGVAAGYAALEFARRGGYSRGELCIISEETVAPYERPALSKGYLLPEGA 60
Query: 61 ARLPGFHTCVGANDELLTAKWYKENGIELVLGTKVITADVRMKTLLTATGETISYKNLII 120
ARLPGFHTCVGANDELLTAKWYKENGIELVLGTKVITADVRMKTLLTATGETISYKNLII
Sbjct: 61 ARLPGFHTCVGANDELLTAKWYKENGIELVLGTKVITADVRMKTLLTATGETISYKNLII 120
Query: 121 ATGARALKLEEFGISGSDASNICYLRNLDDADKLVNVMKSCPGGNAVVIGGGYIGMECAA 180
ATGARALKLEEFGISGSDASNICYLRNLDDADKLVNVMKSCPGGNAVVIGGGYIGMECAA
Sbjct: 121 ATGARALKLEEFGISGSDASNICYLRNLDDADKLVNVMKSCPGGNAVVIGGGYIGMECAA 180
Query: 181 ALVTNRIKVTMVFPESHCMARLFTPKIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVT 240
ALVTNRIKVTMVFPESHCMARLFTPKIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVT
Sbjct: 181 ALVTNRIKVTMVFPESHCMARLFTPKIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVT 240
Query: 241 SVILKDGKHLPADMVVVGIGIRASTGLFEGQLLMEQGGIKVNGQMLTSDGSVYAVGDVAA 300
SVILKDGKHLPADMVVVGIGIRASTGLFEGQLLMEQGGIKVNGQMLTSDGSVYAVGDVAA
Sbjct: 241 SVILKDGKHLPADMVVVGIGIRASTGLFEGQLLMEQGGIKVNGQMLTSDGSVYAVGDVAA 300
Query: 301 FPIKLFDGVIRRLEHVDSARRTARHAVAAILEPSKTKDIDYLPFFYSRVFTLSWQFYGNN 360
FPIKLFDGVIRRLEHVDSARRTARHAVAAILEPSKTKDIDYLPFFYSRVFTLSWQFYGNN
Sbjct: 301 FPIKLFDGVIRRLEHVDSARRTARHAVAAILEPSKTKDIDYLPFFYSRVFTLSWQFYGNN 360
Query: 361 TGEVVHFGDFTNSSPRFGAYWVDKSRIRGAFLEGGSREEYEAISNVVRRKAKVINIAELE 420
TGEVVHFGDFTNSSPRFGAYWVDKSRIRGAFLEGGSREEYEAISNVVRRKAKVINIAELE
Sbjct: 361 TGEVVHFGDFTNSSPRFGAYWVDKSRIRGAFLEGGSREEYEAISNVVRRKAKVINIAELE 420
Query: 421 KQGLMFAIQESQKDLPDGGLALGEKPTYVWHXXXXXXXXXXXXXFGYWYGRKRRRW 476
KQGLMFAIQESQKDLPDGGLALGEKPTYVWH FGYWYGRKRRRW
Sbjct: 421 KQGLMFAIQESQKDLPDGGLALGEKPTYVWHATAGVIAAASIAAFGYWYGRKRRRW 476
>Os09g0567300 Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)
(Ascorbate free radical reductase) (AFR reductase)
Length = 435
Score = 456 bits (1172), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/430 (53%), Positives = 301/430 (70%), Gaps = 7/430 (1%)
Query: 3 RAFVHVILXXXXXXXXXXLEFARRGGYSRGELCIISEETVAPYERPALSKGYLLPEGAAR 62
+ F +VIL EFA++G GEL IIS+E VAPYERPALSKGYL P+ AAR
Sbjct: 5 KHFKYVILGGGVAAGYAAREFAKQG-VKPGELAIISKEAVAPYERPALSKGYLFPQNAAR 63
Query: 63 LPGFHTCVGANDELLTAKWYKENGIELVLGTKVITADVRMKTLLTATGETISYKNLIIAT 122
LPGFH CVG+ E L +WY E GIEL+L T+++ AD+ KTL +A G T +Y+ LIIAT
Sbjct: 64 LPGFHVCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSAVGATFTYEILIIAT 123
Query: 123 GARALKLEEFGISGSDASNICYLRNLDDADKLVNVMKSCPGGNAVVIGGGYIGMECAAAL 182
G+ +KL +FG G+D++NI YLR +DDADKLV +++ GG AV++GGGYIG+E +AAL
Sbjct: 124 GSSVIKLSDFGTQGADSNNILYLREVDDADKLVAAIQAKKGGKAVIVGGGYIGLELSAAL 183
Query: 183 VTNRIKVTMVFPESHCMARLFTPKIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVTSV 242
N VTMVFPE CM RLFT IA +YE+YYT+KGV VKGTV F+ D+ G VT+V
Sbjct: 184 KINDFDVTMVFPEPWCMPRLFTADIAAFYESYYTNKGVKIVKGTVAVGFDADANGDVTAV 243
Query: 243 ILKDGKHLPADMVVVGIGIRASTGLFEGQLLMEQGGIKVNGQMLTSDGSVYAVGDVAAFP 302
LK+G L AD+VVVG+G R T LF+GQ+ E+GGIK + TS VYAVGDVA FP
Sbjct: 244 NLKNGSVLEADIVVVGVGGRPLTTLFKGQVAEEKGGIKTDAFFETSVPGVYAVGDVATFP 303
Query: 303 IKLFDGVIRRLEHVDSARRTARHAVAAILEPSKTKDI---DYLPFFYSRVFTLSWQFYGN 359
+K+++ +RR+EHVD AR++A AV AI + + DYLP+FYSR F L WQFYG+
Sbjct: 304 MKMYNE-LRRVEHVDHARKSAEQAVKAIKGKESGESVVEYDYLPYFYSRSFDLGWQFYGD 362
Query: 360 NTGEVVHFGDF--TNSSPRFGAYWVDKSRIRGAFLEGGSREEYEAISNVVRRKAKVINIA 417
N G+ + FGD T++ P+FG+YW+ ++ GAFLEGGS +E +AI+ V + + V NI
Sbjct: 363 NVGDTILFGDSDPTSAKPKFGSYWIKDGKVLGAFLEGGSPDENKAIAKVAKTQPPVANIE 422
Query: 418 ELEKQGLMFA 427
EL+K+GL FA
Sbjct: 423 ELKKEGLQFA 432
>Os08g0557600 Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)
(Ascorbate free radical reductase) (AFR reductase)
Length = 435
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/432 (51%), Positives = 299/432 (69%), Gaps = 7/432 (1%)
Query: 3 RAFVHVILXXXXXXXXXXLEFARRGGYSRGELCIISEETVAPYERPALSKGYLLPEGAAR 62
+ F +VIL EFA++G GEL IIS+E+VAPYERPALSKGYL P+ AAR
Sbjct: 5 KHFTYVILGGGVAAGYAAREFAKQG-VKPGELAIISKESVAPYERPALSKGYLFPQNAAR 63
Query: 63 LPGFHTCVGANDELLTAKWYKENGIELVLGTKVITADVRMKTLLTATGETISYKNLIIAT 122
LPGFHTCVG+ E L +WY E GIEL+L T+++ AD+ KTL ++ T +Y L+IAT
Sbjct: 64 LPGFHTCVGSGGERLLPEWYSEKGIELILSTEIVKADLASKTLTSSADATFTYDTLLIAT 123
Query: 123 GARALKLEEFGISGSDASNICYLRNLDDADKLVNVMKSCPGGNAVVIGGGYIGMECAAAL 182
G+ +KL +FG+ G++A++I YLR+++DADKLV M++ G AV++GGGYIG+E +AAL
Sbjct: 124 GSSVIKLTDFGVQGAEANDILYLRDIEDADKLVAAMQAKKDGKAVIVGGGYIGLELSAAL 183
Query: 183 VTNRIKVTMVFPESHCMARLFTPKIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVTSV 242
TN VTMV+PE CM RLFT +A +YE YY +KG+ +KGTV F+ D+ G VT+V
Sbjct: 184 KTNNFDVTMVYPEPWCMPRLFTSGLAAFYEGYYANKGIHIIKGTVAVGFDADANGDVTAV 243
Query: 243 ILKDGKHLPADMVVVGIGIRASTGLFEGQLLMEQGGIKVNGQMLTSDGSVYAVGDVAAFP 302
LK+G L AD+V+VG+G R T LF+GQ+ E+GGIK + TS VYA+ DVAAFP
Sbjct: 244 KLKNGNVLEADIVIVGVGGRPLTHLFKGQVAEEKGGIKTDAFFETSVPGVYAIADVAAFP 303
Query: 303 IKLFDGVIRRLEHVDSARRTARHAVAAILEPSKTKDI---DYLPFFYSRVFTLSWQFYGN 359
+KL++ IRR+EHVD AR++A AV AI + + DYLP+FYSR F LSWQFYG+
Sbjct: 304 MKLYNE-IRRVEHVDHARKSAEQAVKAIKAKEAGESVPEYDYLPYFYSRSFDLSWQFYGD 362
Query: 360 NTGEVVHFGDF--TNSSPRFGAYWVDKSRIRGAFLEGGSREEYEAISNVVRRKAKVINIA 417
N GE V FGD T + P+FG+YW+ ++ G FLEGGS EE + I+ V R + V ++
Sbjct: 363 NVGEDVLFGDNDPTAAKPKFGSYWIKDGKVVGVFLEGGSAEENQVIAKVARAQPPVADVE 422
Query: 418 ELEKQGLMFAIQ 429
L+K+GL FA +
Sbjct: 423 ALKKEGLDFAAK 434
>Os08g0151800 Pyridine nucleotide-disulphide oxidoreductase, class I family
protein
Length = 491
Score = 339 bits (869), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/404 (45%), Positives = 255/404 (63%), Gaps = 21/404 (5%)
Query: 28 GYSRGELCIISEETVAPYERPALSKGYLLP--EGAARLPGFHTCVGANDELLTAKWYKEN 85
G + G LCI+S+E PYERPAL+KGYL P + ARLPGFHTCVG+ + TA+WYKEN
Sbjct: 76 GMADGRLCIVSKEAYPPYERPALTKGYLFPPDKKPARLPGFHTCVGSGGQRQTAEWYKEN 135
Query: 86 GIELVLGTKVITADVRMKTLLTATGETISYKNLIIATGARALKLEEFGISGSDASNICYL 145
GIE++ V+ D + TL T++G+ + Y +LII+TG A +L G + + Y+
Sbjct: 136 GIEVLYEDPVVAFDGKTHTLKTSSGKILKYGSLIISTGCEASRLP--AKIGGNLPGVHYI 193
Query: 146 RNLDDADKLVNVMKSCPGGNAVVIGGGYIGMECAAALVTNRIKVTMVFPESHCMARLFTP 205
R++ DAD LV+ + VVIGGGYIGME AAA + T++FPE H M RLFTP
Sbjct: 194 RDVADADSLVSSLGKA--KKIVVIGGGYIGMEVAAAACGWNLDTTIIFPEDHIMPRLFTP 251
Query: 206 KIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVTSVILKDGKHLPADMVVVGIGIRAST 265
+A+ YE Y GV F+KG ++ E S G+V+S +L+DG + AD V+VGIG R
Sbjct: 252 SLAKKYEELYQQNGVKFIKGALIDKLEAGSDGRVSSAVLEDGSVVEADTVIVGIGARPVI 311
Query: 266 GLFEG-QLLMEQGGIKVNGQMLTSDGSVYAVGDVAAFPIKLFDGVIRRLEHVDSARRTAR 324
G FE + + GGI+V+ TS ++A+GDVAAFP+K++D + R+EHVD AR++A
Sbjct: 312 GPFEAVGVNTKVGGIEVDSLFRTSIPGIFAIGDVAAFPLKMYDR-MTRVEHVDHARKSAH 370
Query: 325 HAVAAILEPSKTKDIDYLPFFYSRVF-------TLSWQFYGNNTGEVVHFGDFTNSSPRF 377
H V A+L S TK DYLP+FYSRVF + WQFYG+N GE + G F P+
Sbjct: 371 HCVEALLT-SHTKPYDYLPYFYSRVFEYEGSSRKIWWQFYGDNVGETIEVGSF---EPKI 426
Query: 378 GAYWVDK-SRIRGAFLEGGSREEYEAISNVVRRKAKVINIAELE 420
+W+D SR++G FLE GS EE+ + + + + V++ A+L+
Sbjct: 427 ATFWIDSDSRLKGVFLESGSSEEFSLLPQLAKSQP-VVDKAKLK 469
>Os02g0707000 Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)
(Ascorbate free radical reductase) (AFR reductase)
Length = 232
Score = 258 bits (660), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/230 (61%), Positives = 166/230 (72%), Gaps = 16/230 (6%)
Query: 248 KHLPADMVVVGIGIRASTGLFEGQLLMEQGGIKVNGQMLTSDGSVYAVGDVAAFPIKLFD 307
+ LPADMVVVG+G RA+TGLF+GQL+ME GGIKVNG+M SD SVYAVGDVAAFP+KLF
Sbjct: 1 RRLPADMVVVGVGARANTGLFDGQLVMENGGIKVNGRMQASDASVYAVGDVAAFPVKLFG 60
Query: 308 GVIRRLEHVDSARRTARHAVAAILEPSKT-KDIDYLPFFYSRVFTLSWQFYGNNTGEVVH 366
G +RRLEHVD ARRTARHAVAA+LE + + IDYLPFFYSRVF+LSWQFYG+N GE VH
Sbjct: 61 GDVRRLEHVDCARRTARHAVAAMLEGTGSVGHIDYLPFFYSRVFSLSWQFYGDNAGEAVH 120
Query: 367 FGDFT------NSSPRFGAYWVDKSRIRGAFLEGGSREEYEAISNVVRRKAKVINIAELE 420
FGD ++P+FGAYWV R+ GAFLEGGSR+EYEA++ VRR A V ++AELE
Sbjct: 121 FGDLAPPGDGDGAAPKFGAYWVRDGRVAGAFLEGGSRQEYEAVAAAVRRGAAVADVAELE 180
Query: 421 KQGLMFAIQESQKDLPDGGLALGEKPTYVWHXXXXXXXXXXXXXFGYWYG 470
++GL FA Q + GG G KPT WH F WYG
Sbjct: 181 RRGLAFATQAT------GG---GGKPTCAWHATVGVAAAVSIAAFACWYG 221
>AK110799
Length = 587
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 175/382 (45%), Gaps = 53/382 (13%)
Query: 21 LEFARRGGYSRGELCIISEETVAPYERPALSKGYLLPEGAARLPGFHTCVGANDELLTAK 80
+E R+ G+ +G + I+S E A +R LSK + A+ + +T
Sbjct: 187 VEELRKSGF-QGAITIVSNEQ-AIIDRTKLSKALI----------------ADADKVT-- 226
Query: 81 WYKENGIELVLGTK-----VITADVRMKTLLTATGETISYKNLIIATGARALKLEEFGIS 135
W + ++ VLG + V D + K++ G + Y+NL++ATG ++ I
Sbjct: 227 WRSKAHLDNVLGVQLENATVTAVDAKAKSVTLDNGRKLEYENLVLATGGTPKRIP---IP 283
Query: 136 GSDASNICYLRNLDDADKLVNVMKSCPG-----GNAVVIGGGYIGMECAAALVTNRIKVT 190
G+D N+ LR + D + + + G N VVIG +IGME A AL T R V+
Sbjct: 284 GADLPNVLVLRQISDTKAINEAVGNEDGEASNKKNVVVIGSSFIGMEAAIAL-TKRANVS 342
Query: 191 MVFPESHCMARLFTPKIAEYYENYYTSKGVTFVKGTVLTSFEKDSTGKVTSVILKDG--- 247
+V E R+ ++ G+ F ++ + +S +V++K+
Sbjct: 343 VVGMEKVPFERVLGEQVGGGLMKAQIKNGLKFYMEAGVSRIDGESGSGPKAVVIKNSEGK 402
Query: 248 -KHLPADMVVVGIGIRASTGLFE--GQLLMEQGGIKVNGQM-LTSDGSVYAVGDVAAFPI 303
+ LPAD+V++G+G T + G L + GGI V+ ++ + ++A+GD+AA P
Sbjct: 403 EESLPADVVILGVGAAPVTDFLKESGFQLEKDGGIAVDSKLRVEGHRDIFAIGDIAAAPT 462
Query: 304 KLFDGVIRRLEHVDSARRTARHAVAAILEPSKTKDIDYLPFFYSRVFT-LSWQFYGNNTG 362
+ R+EH + A R AVA L ++T D D + F+S + + L + G
Sbjct: 463 RASPH--SRIEHWNVASNQGR-AVAKTLAGTET-DYDKVAIFWSALGSQLRYCGSGGPQF 518
Query: 363 EVVHFGDFTNSSP---RFGAYW 381
+ VH N P +F AY+
Sbjct: 519 DTVHV----NGKPEELKFSAYY 536
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,467,228
Number of extensions: 657018
Number of successful extensions: 1351
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1331
Number of HSP's successfully gapped: 6
Length of query: 476
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 371
Effective length of database: 11,553,331
Effective search space: 4286285801
Effective search space used: 4286285801
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)