Os09g0567300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase).
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Os09g0567300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.91 | 0.199 | 14.3 | -0.267 | 0.365 | -0.499 | 0.399 | -0.21 | -0.24 | 10.4 | 59.63 | 7 | -- | -- |
| 18 | 0.199 | 14.3 | -0.277 | 0.365 | -0.494 | 0.501 | -- | -0.242 | 10.6 | 59.63 | 7 | -- | -- |
| 18.36 | 0.201 | 14.3 | -0.243 | 0.362 | -0.493 | -- | -0.473 | -0.238 | 10.5 | 59.35 | 7 | -- | -- |
| 19.02 | 0.203 | 14.3 | -0.257 | 0.358 | -0.504 | -- | -- | -0.243 | 10.4 | 60.77 | 6 | -- | -- |
| 24.59 | 0.232 | 14.3 | -0.241 | -- | -0.649 | -- | -0.403 | -0.256 | -- | 63 | 4 | -- | -- |
| 22.77 | 0.224 | 14.3 | -0.279 | 0.628 | -- | 0.551 | -- | -0.218 | 12.4 | -- | -- | -- | -- |
| 24.07 | 0.23 | 14.3 | -0.258 | 0.626 | -- | -- | -- | -0.216 | 12.4 | -- | -- | -- | -- |
| 25.12 | 0.234 | 14.3 | -0.255 | -- | -0.657 | -- | -- | -0.26 | -- | 63.26 | 4 | -- | -- |
| 20.75 | 0.212 | 14.3 | -- | 0.358 | -0.507 | -- | -- | -0.214 | 10.5 | 60.54 | 6 | -- | -- |
| 48.69 | 0.326 | 14.3 | -0.279 | -- | -- | -- | -- | -0.226 | -- | -- | -- | -- | -- |
| 25.82 | 0.238 | 14.3 | -- | 0.63 | -- | -- | -- | -0.187 | 12.5 | -- | -- | -- | -- |
| 26.82 | 0.241 | 14.3 | -- | -- | -0.664 | -- | -- | -0.228 | -- | 63 | 2 | -- | -- |
| 50.74 | 0.332 | 14.3 | -- | -- | -- | -- | -- | -0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.77 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 3 | 16.82 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 4 | 16.83 | temperature | 10 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 5 | 16.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 9 | 17.00 | humidity | 60 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 11 | 17.01 | humidity | 60 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 16 | 17.10 | radiation | 1 | 270 | > th | dose independent | rect. | 17 | 22 |
| 19 | 17.11 | humidity | 60 | 10 | > th | dose dependent | sin | 2 | NA |
| 29 | 17.17 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 17 |
| 31 | 17.18 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 74 | 17.37 | humidity | 50 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 112 | 17.54 | radiation | 1 | 270 | < th | dose independent | sin | 3 | NA |
| 128 | 17.58 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 132 | 17.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 137 | 17.62 | radiation | 10 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 142 | 17.64 | radiation | 1 | 270 | > th | dose independent | sin | 3 | NA |
| 145 | 17.64 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 156 | 17.67 | humidity | 60 | 10 | > th | dose dependent | rect. | 14 | 22 |
| 157 | 17.68 | radiation | 1 | 270 | < th | dose dependent | sin | 2 | NA |
| 166 | 17.70 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 182 | 17.72 | humidity | 60 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 190 | 17.75 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 16 |
| 200 | 17.78 | humidity | 60 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 234 | 17.83 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 253 | 17.88 | humidity | 90 | 10 | < th | dose dependent | sin | 2 | NA |
| 276 | 17.90 | humidity | 60 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 321 | 17.97 | radiation | 1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 336 | 17.99 | humidity | 60 | 10 | > th | dose dependent | no | NA | NA |
| 350 | 18.02 | temperature | 20 | 30 | > th | dose dependent | sin | 4 | NA |
| 357 | 18.02 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 21 |
| 412 | 18.08 | humidity | 90 | 270 | < th | dose independent | rect. | 6 | 8 |
| 424 | 18.09 | temperature | 10 | 10 | > th | dose dependent | sin | 3 | NA |
| 502 | 18.15 | humidity | 50 | 270 | > th | dose independent | rect. | 14 | 16 |
| 513 | 18.16 | temperature | 25 | 90 | > th | dose independent | rect. | 23 | 15 |
| 559 | 18.19 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 567 | 18.20 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 575 | 18.21 | humidity | 90 | 270 | < th | dose independent | rect. | 6 | 19 |
| 580 | 18.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 602 | 18.23 | radiation | 1 | 270 | < th | dose independent | rect. | 2 | 9 |
| 606 | 18.23 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 7 |
| 640 | 18.26 | temperature | 25 | 270 | > th | dose independent | rect. | 20 | 16 |
| 653 | 18.26 | humidity | 60 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 670 | 18.28 | humidity | 80 | 30 | > th | dose independent | sin | 2 | NA |
| 683 | 18.29 | radiation | 1 | 270 | > th | dose independent | rect. | 5 | 9 |
| 697 | 18.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 748 | 18.32 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 769 | 18.34 | radiation | 10 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 809 | 18.36 | humidity | 90 | 10 | < th | dose dependent | rect. | 23 | 17 |
| 855 | 18.39 | humidity | 80 | 10 | < th | dose independent | sin | 2 | NA |
| 867 | 18.39 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 18 |
| 872 | 18.39 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 876 | 18.39 | humidity | 90 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 883 | 18.40 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 907 | 18.41 | humidity | 90 | 10 | < th | dose dependent | rect. | 23 | 15 |
| 949 | 18.43 | radiation | 10 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 969 | 18.44 | radiation | 30 | 90 | < th | dose dependent | rect. | 14 | 18 |
| 1000 | 18.46 | humidity | 70 | 90 | > th | dose dependent | rect. | 3 | 10 |