Os08g0557600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase).
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Os08g0557600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR) (Ascorbate free radical reductase) (AFR reductase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.35 | 0.449 | 10.3 | 0.507 | 0.309 | -1.26 | 0.0763 | -0.939 | 0.17 | 11.1 | 21.13 | 1217 | -- | -- |
| 93.22 | 0.45 | 10.3 | 0.674 | 0.278 | -1.12 | 0.181 | -- | 0.219 | 11.2 | 21.3 | 1133 | -- | -- |
| 91.37 | 0.445 | 10.3 | 0.508 | 0.303 | -1.26 | -- | -0.934 | 0.17 | 11.2 | 21.13 | 1200 | -- | -- |
| 92.08 | 0.447 | 10.2 | 0.622 | 0.281 | -1.04 | -- | -- | 0.248 | 11 | 22 | 1140 | -- | -- |
| 95.97 | 0.456 | 10.3 | 0.539 | -- | -1.27 | -- | -0.793 | 0.174 | -- | 21.2 | 1080 | -- | -- |
| 132.17 | 0.539 | 10.3 | 0.241 | 0.401 | -- | 0.0724 | -- | -0.0959 | 11.5 | -- | -- | -- | -- |
| 132.19 | 0.538 | 10.3 | 0.244 | 0.401 | -- | -- | -- | -0.0955 | 11.6 | -- | -- | -- | -- |
| 96.06 | 0.456 | 10.2 | 0.618 | -- | -1.07 | -- | -- | 0.249 | -- | 22.09 | 1033 | -- | -- |
| 101.31 | 0.469 | 10.3 | -- | 0.272 | -0.877 | -- | -- | 0.154 | 11.2 | 22.1 | 1066 | -- | -- |
| 142.3 | 0.557 | 10.3 | 0.233 | -- | -- | -- | -- | -0.1 | -- | -- | -- | -- | -- |
| 133.76 | 0.541 | 10.3 | -- | 0.398 | -- | -- | -- | -0.123 | 11.5 | -- | -- | -- | -- |
| 105.32 | 0.478 | 10.3 | -- | -- | -0.933 | -- | -- | 0.141 | -- | 22.07 | 1006 | -- | -- |
| 143.73 | 0.56 | 10.3 | -- | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 2 | 87.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 3 | 88.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 4 | 88.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 6 | 88.49 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 11 | 88.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 20 | 89.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 31 | 90.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 7 |
| 66 | 91.73 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 74 | 91.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 78 | 91.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 123 | 92.51 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 134 | 92.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 156 | 92.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 176 | 93.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 184 | 93.16 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 264 | 93.71 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 296 | 93.96 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 327 | 94.11 | temperature | 25 | 720 | < th | dose dependent | sin | 3 | NA |
| 341 | 94.21 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 347 | 94.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 364 | 94.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 365 | 94.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 420 | 94.64 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 436 | 94.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 16 |
| 438 | 94.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 458 | 94.79 | temperature | 15 | 720 | > th | dose dependent | sin | 6 | NA |
| 461 | 94.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 9 |
| 653 | 95.60 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 848 | 96.23 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 2 |