BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0529100 Os09g0529100|AK069696
(269 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0529100 6-phosphogluconolactonase domain containing pr... 533 e-152
Os08g0547100 6-phosphogluconolactonase domain containing pr... 426 e-119
Os03g0416500 6-phosphogluconolactonase domain containing pr... 264 6e-71
Os07g0604000 Similar to 6-phosphogluconolactonase-like protein 219 1e-57
>Os09g0529100 6-phosphogluconolactonase domain containing protein
Length = 269
Score = 533 bits (1372), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/269 (97%), Positives = 262/269 (97%)
Query: 1 MATDGXXXXXXXGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSL 60
MATDG GSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSL
Sbjct: 1 MATDGAAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSL 60
Query: 61 IKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYA 120
IKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYA
Sbjct: 61 IKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYA 120
Query: 121 INDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPL 180
INDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPL
Sbjct: 121 INDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPL 180
Query: 181 VNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSD 240
VNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSD
Sbjct: 181 VNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSD 240
Query: 241 LLPVEMAVLQDGEFTWFTDKPAVSMLQNK 269
LLPVEMAVLQDGEFTWFTDKPAVSMLQNK
Sbjct: 241 LLPVEMAVLQDGEFTWFTDKPAVSMLQNK 269
>Os08g0547100 6-phosphogluconolactonase domain containing protein
Length = 327
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/252 (78%), Positives = 225/252 (89%)
Query: 17 KKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSV 76
+K++LIFDAEE LA SLAKYTA LS + AERGAFTV LSGGSLIK +RKL E PYL++V
Sbjct: 75 RKKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAV 134
Query: 77 DWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYET 136
+WSKWHVFWVDERVVPKDH DSNYKLA+DG LSKVPIP Q+YAIND LSAEGAAD+YET
Sbjct: 135 EWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYET 194
Query: 137 CLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPK 196
CLKQLV +GV+A+S+ TGFP+ D+MLLGMGPDGH+ASLFPGHP+VNEN KWV+YIKDSPK
Sbjct: 195 CLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPK 254
Query: 197 PPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTW 256
PPPERITFTFP++NSSA++A+VVTGAGKAGAV KA SDKQ+SSDLLPVEM Q+G TW
Sbjct: 255 PPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTW 314
Query: 257 FTDKPAVSMLQN 268
FTDKPAVSML +
Sbjct: 315 FTDKPAVSMLSS 326
>Os03g0416500 6-phosphogluconolactonase domain containing protein
Length = 296
Score = 264 bits (674), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 170/257 (66%), Gaps = 2/257 (0%)
Query: 15 KKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLD 74
KK E+ +F++ +++A LA+Y +++S ERG F + LSGG LI +RKL E PY
Sbjct: 29 KKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNK 88
Query: 75 SVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDY 134
++DWSKW++FW DER V K+H DS YK + FLSKVPI G VY+IND ++ E AA DY
Sbjct: 89 TLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATDY 148
Query: 135 ETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDS 194
E ++QLVK + +S+S P+FD++LL +G DGH+ASLFP HP + WVTYI DS
Sbjct: 149 EFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDS 208
Query: 195 PKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDL--LPVEMAVLQDG 252
P PPPERITFT PVINS++ +A+V TG KA AV A+SD D +P M DG
Sbjct: 209 PVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTDG 268
Query: 253 EFTWFTDKPAVSMLQNK 269
+ WF DK + S L+ K
Sbjct: 269 KLVWFLDKASASFLEAK 285
>Os07g0604000 Similar to 6-phosphogluconolactonase-like protein
Length = 212
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 134/198 (67%), Gaps = 3/198 (1%)
Query: 72 YLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAA 131
Y ++DWSKW++FW DER V K+H +SNY++ +GFLSKVPI G VY+IND + E AA
Sbjct: 1 YNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAA 60
Query: 132 DDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYI 191
DYE ++QLVK I +S+S P+FD++LL MG DGH+ASLFP HP + W+TYI
Sbjct: 61 TDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYI 120
Query: 192 KDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDL---LPVEMAV 248
DSP+PPPERITFT PVINS++ +A+V TG K+ AV A+SD + LP M
Sbjct: 121 TDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQ 180
Query: 249 LQDGEFTWFTDKPAVSML 266
DG+ WF DK A S L
Sbjct: 181 PTDGKLVWFLDKSAASSL 198
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,658,091
Number of extensions: 415531
Number of successful extensions: 1093
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1091
Number of HSP's successfully gapped: 4
Length of query: 269
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 170
Effective length of database: 11,866,615
Effective search space: 2017324550
Effective search space used: 2017324550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)