Os08g0547100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 6-phosphogluconolactonase domain containing protein.
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Os08g0547100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 6-phosphogluconolactonase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.43 | 0.464 | 7.14 | 0.541 | 1.02 | -2.61 | -1.34 | 1.58 | -0.423 | 10.4 | 20.79 | 264 | -- | -- |
| 99.15 | 0.464 | 7.17 | 0.234 | 1.04 | -2.49 | -1.28 | -- | -0.505 | 10.2 | 20.58 | 261 | -- | -- |
| 104.61 | 0.476 | 7.15 | 0.467 | 1.03 | -2.59 | -- | 1.44 | -0.44 | 10.3 | 20.78 | 267 | -- | -- |
| 105.53 | 0.478 | 7.18 | 0.176 | 1.07 | -2.46 | -- | -- | -0.521 | 10.1 | 20.6 | 250 | -- | -- |
| 126.92 | 0.525 | 7.11 | 0.787 | -- | -2.97 | -- | 2.57 | -0.337 | -- | 20.94 | 576 | -- | -- |
| 209.36 | 0.678 | 7.26 | -0.362 | 1.53 | -- | -0.667 | -- | -0.944 | 7.63 | -- | -- | -- | -- |
| 210.54 | 0.679 | 7.26 | -0.38 | 1.53 | -- | -- | -- | -0.944 | 7.54 | -- | -- | -- | -- |
| 134.63 | 0.54 | 7.19 | 0.293 | -- | -2.79 | -- | -- | -0.443 | -- | 20.44 | 543 | -- | -- |
| 106.3 | 0.48 | 7.18 | -- | 1.07 | -2.4 | -- | -- | -0.55 | 10.1 | 20.67 | 250 | -- | -- |
| 335.69 | 0.856 | 7.29 | -0.358 | -- | -- | -- | -- | -0.92 | -- | -- | -- | -- | -- |
| 214.35 | 0.685 | 7.25 | -- | 1.53 | -- | -- | -- | -0.902 | 7.56 | -- | -- | -- | -- |
| 136.86 | 0.545 | 7.2 | -- | -- | -2.71 | -- | -- | -0.489 | -- | 20.68 | 533 | -- | -- |
| 339.06 | 0.859 | 7.29 | -- | -- | -- | -- | -- | -0.881 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.44 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 7 | 96.57 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 16 | 98.12 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 23 | 99.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 54 | 103.79 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 59 | 104.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 70 | 104.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 115 | 106.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 124 | 106.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 134 | 106.70 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 151 | 107.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 18 |
| 154 | 107.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 209 | 108.15 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 220 | 108.23 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 250 | 108.46 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 253 | 108.47 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 266 | 108.64 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 276 | 108.71 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 283 | 108.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 285 | 108.78 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 294 | 108.87 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 368 | 109.52 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 479 | 110.32 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 526 | 110.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 537 | 110.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 542 | 110.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 577 | 111.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 5 |
| 584 | 111.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 611 | 111.23 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 618 | 111.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 637 | 111.43 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 638 | 111.44 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 642 | 111.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 669 | 111.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 686 | 111.80 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 779 | 112.50 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 806 | 112.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 12 |
| 825 | 112.71 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 879 | 113.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 960 | 113.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 988 | 113.73 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 15 |