BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0416800 Os09g0416800|AK065377
(280 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0416800 Similar to CCR4-NOT transcription complex subu... 550 e-157
Os02g0796300 Similar to CCR4-NOT transcription complex subu... 388 e-108
Os04g0684900 Ribonuclease CAF1 family protein 207 6e-54
Os07g0169800 147 7e-36
Os08g0440300 Ribonuclease CAF1 family protein 134 7e-32
Os06g0138400 131 7e-31
Os10g0128300 112 2e-25
Os10g0123900 97 2e-20
Os10g0124200 85 6e-17
Os10g0421700 84 2e-16
Os06g0536000 81 9e-16
Os10g0421000 72 3e-13
Os10g0420600 72 5e-13
Os06g0503900 70 1e-12
Os03g0744401 66 3e-11
>Os09g0416800 Similar to CCR4-NOT transcription complex subunit 7
(CCR4-associated factor 1) (CAF1) (BTG1 binding factor
1)
Length = 280
Score = 550 bits (1417), Expect = e-157, Method: Compositional matrix adjust.
Identities = 268/280 (95%), Positives = 268/280 (95%)
Query: 1 MATPAAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNA 60
MATPAAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNA
Sbjct: 1 MATPAAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNA 60
Query: 61 DFNYATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADS 120
DFNYATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADS
Sbjct: 61 DFNYATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADS 120
Query: 121 IDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXX 180
IDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDF
Sbjct: 121 IDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFGYLLKLLTGT 180
Query: 181 XXPDTITGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSL 240
PDTITGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSL
Sbjct: 181 YLPDTITGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSL 240
Query: 241 LTALSFKKLKEAYFNGLTEKYAGVLYGLGTEGGETSSAAH 280
LTALSFKKLKEAYFNGLTEKYAGVLYGLGTEGGETSSAAH
Sbjct: 241 LTALSFKKLKEAYFNGLTEKYAGVLYGLGTEGGETSSAAH 280
>Os02g0796300 Similar to CCR4-NOT transcription complex subunit 7
(CCR4-associated factor 1) (CAF1) (BTG1 binding factor
1)
Length = 295
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/265 (71%), Positives = 216/265 (81%), Gaps = 2/265 (0%)
Query: 7 EKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYAT 66
E+P VEIREVW DNLE EFA+IR++VD+FP+VAMDTEFPG+VCRP+G F+S AD+NYAT
Sbjct: 27 EEP--VEIREVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYAT 84
Query: 67 LKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRR 126
LKANVDML LIQLGLTFS+ G LP+LGP R CVWQFNFR FD D+ A+DSI+LLRR
Sbjct: 85 LKANVDMLHLIQLGLTFSSPRGELPALGPGRRRCVWQFNFREFDDARDIFASDSIELLRR 144
Query: 127 SGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXPDTI 186
SGIDF R+S G DARRFAELLMSSGVV+N V WVTFH+GYDF PDT
Sbjct: 145 SGIDFRRNSERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDFGYLLKILTCSSLPDTQ 204
Query: 187 TGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTALSF 246
GFF L++IYFP VYDIKHLM+FCNSLHGGLNKLAELLDVERVG HQAGSDSL+T+ +F
Sbjct: 205 AGFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVGESHQAGSDSLVTSCAF 264
Query: 247 KKLKEAYFNGLTEKYAGVLYGLGTE 271
KLK+++F G TEKYAGVLYGL E
Sbjct: 265 WKLKDSFFAGSTEKYAGVLYGLNAE 289
>Os04g0684900 Ribonuclease CAF1 family protein
Length = 289
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 155/271 (57%), Gaps = 15/271 (5%)
Query: 5 AAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLG--TFKSNADF 62
AA K VEIR VW N+E EF +IR +D FPYV+MDTEFPGV+ RP + D
Sbjct: 7 AARKKPPVEIRRVWAHNVEEEFRIIRNAIDHFPYVSMDTEFPGVIHRPTKHPALLTAGD- 65
Query: 63 NYATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSID 122
Y L+ NVD L LIQ+G+T + P+L ++ N FD R AA+S+
Sbjct: 66 RYDLLRRNVDALHLIQVGITLAASPTAAPALA-------FEINLSDFDQRVHRHAAESVQ 118
Query: 123 LLRRSGIDFTRHSADGADARRFAELLMSSGVVM-NSEVRWVTFHSGYDFXXXXXXXXXXX 181
LL G+D H G A A LLMSSG+V + V+WVTFHS YDF
Sbjct: 119 LLAEHGVDLAAHRRHGVRASALAPLLMSSGLVCSHGAVKWVTFHSAYDFAYLVKLLMGRK 178
Query: 182 XPDTITGFFDLIRIYF-PVVYDIKHLMRFC-NSLHGGLNKLAELLDVER-VGICHQAGSD 238
P ++ F +L+R++F VYD+KH+MR C L+GGL ++A L V+R G CHQA SD
Sbjct: 179 LPRSMAEFLNLVRVFFGDEVYDVKHMMRHCGGELYGGLERVAAALQVKRAAGRCHQAASD 238
Query: 239 SLLTALSFKKLKEAYF-NGLTEKYAGVLYGL 268
SLLT F++++E YF E Y GVL+GL
Sbjct: 239 SLLTWDVFRRMRELYFLKHGVEAYQGVLFGL 269
>Os07g0169800
Length = 367
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 125/257 (48%), Gaps = 10/257 (3%)
Query: 9 PDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLG-TFKSNADFNYATL 67
P+ V++R VW NL+ E +I + F A+DTEFPG V RP + YA L
Sbjct: 87 PEIVKVRSVWAHNLDEEANLIESLFPSFRLAAVDTEFPGTVHRPSAPAYTLTRKQKYALL 146
Query: 68 KANVDMLKLIQLGLTFSNEHGGLPSLGPEGRP-CVWQFNFRGFDPRTDVAAADSIDLLRR 126
K NVD L L+QLGLT + G LP LG G VW+FNFR FD R A +SI LLR
Sbjct: 147 KKNVDELHLVQLGLTLFDAGGRLPDLGTGGAARYVWEFNFREFDLRRHAHAPESIALLRS 206
Query: 127 SGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXP--- 183
G+DF R G DA F L VTF YD
Sbjct: 207 KGVDFDRTRRGGVDAAAFGPRLRRWLRAGLGRAGLVTFSGAYDLAYMLKMLYGGGGGGYR 266
Query: 184 ---DTITGFFDLIRIYFPVVYDIKHLMRFC-NSLHGGLNKLAELLDVER-VGICHQAGSD 238
D T F + + +YD+ + R C + GGL ++A L V R VG HQAGSD
Sbjct: 267 LPGDAATFEFVVRAVIGRTLYDVGKMARHCPGDMRGGLERVAGKLGVRRAVGEAHQAGSD 326
Query: 239 SLLTALSFKKLKEAYFN 255
SLLT+ F +++E YF+
Sbjct: 327 SLLTSQMFMRMRERYFD 343
>Os08g0440300 Ribonuclease CAF1 family protein
Length = 93
Score = 134 bits (337), Expect = 7e-32, Method: Composition-based stats.
Identities = 61/82 (74%), Positives = 70/82 (85%)
Query: 192 LIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLTALSFKKLKE 251
LIRIYFPV+YDIKHLMRFC++LHGGL++L ELLDV+RVG CHQAGSDSLLT + K+KE
Sbjct: 1 LIRIYFPVLYDIKHLMRFCSNLHGGLSRLGELLDVKRVGTCHQAGSDSLLTLGCYNKIKE 60
Query: 252 AYFNGLTEKYAGVLYGLGTEGG 273
YF G TEK+AGVLYGL E G
Sbjct: 61 VYFKGSTEKHAGVLYGLVIEDG 82
>Os06g0138400
Length = 375
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 138/276 (50%), Gaps = 35/276 (12%)
Query: 10 DGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVV-----CRPLGTFKSNADFNY 64
D VE+R+VW NLE E I ++ +P V+MDTEFPG V R L T + +Y
Sbjct: 108 DEVEVRDVWAANLEEELRSIGALLPTYPVVSMDTEFPGTVHDVATPRHLRTPRE----SY 163
Query: 65 ATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGR-PCVWQFNFRGFDPRTDVAAADSIDL 123
A +K NVD L L+QLGL S GP GR P WQFNF GFD R D + S+ +
Sbjct: 164 AVVKRNVDELHLLQLGLALS---------GPAGRCPVAWQFNFAGFDARRDPHSGSSVAM 214
Query: 124 LRRSGIDFT---RHSADGAD-ARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXX- 178
L G+DFT RH D D AR F ++ G + W F YDF
Sbjct: 215 LAAHGVDFTALRRHGIDHGDFARAFGRSKLACG-----RLTWAAFSGSYDFAYLVKVLTG 269
Query: 179 XXXXPDTITGFFDLI-RIYFPVVYDIKHLMRFC---NSLHGGLNKLAELLDVER-VGICH 233
P T+ GF + +I+ P V D+KHL +FC + GGL +A L V R G H
Sbjct: 270 GRPLPSTLEGFMAKVSKIFGPAVLDVKHLAKFCGGGGGIRGGLEHVAAALGVHRAAGRAH 329
Query: 234 QAGSDSLLTALSFKKLKEAYF-NGLTEKYAGVLYGL 268
AGSDSLLT+ + + +F N +AG + GL
Sbjct: 330 NAGSDSLLTSDVLHAMVDRFFPNSGVLNHAGAIDGL 365
>Os10g0128300
Length = 291
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 121/246 (49%), Gaps = 7/246 (2%)
Query: 12 VEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVV-CRPLGTFKSNADFNYATLKAN 70
V R+V NL E ++IR ++ FP+VA+DT+FPGVV P G AD YA ++AN
Sbjct: 31 VHTRKVTAVNLHREMSLIRSLMPTFPFVAVDTQFPGVVHPHPRGA-GVTADDRYAAVRAN 89
Query: 71 VDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGID 130
D L L+QLG+T S G LP G +W F+F GFD R A +S+ LR G D
Sbjct: 90 ADELCLLQLGITLSAADGRLPVDGALVE-FMWDFDFAGFDARYHRHAPESVQFLRAQGFD 148
Query: 131 FTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFX-XXXXXXXXXXXPDTITGF 189
F G A FA L +SG++ V WV F YD P T GF
Sbjct: 149 FEAARLAGVPALAFAAELAASGILGLRGVTWVAFGGMYDVAFLLRLATGGAPLPATRLGF 208
Query: 190 FDLIRIYFPV-VYDIKHLMRFCNSLHGGLNKLAELLDV-ERVGICHQAGSDSLLTALSFK 247
+ F V+D KH+ + +HGGL + +L + ++ H AG +S++ F
Sbjct: 209 LAQVGAVFGTQVFDAKHMASLLH-MHGGLAAVGGMLRLPPQLPRRHMAGQNSVMAIQLFM 267
Query: 248 KLKEAY 253
+L+ +
Sbjct: 268 ELRRRF 273
>Os10g0123900
Length = 260
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 13/257 (5%)
Query: 21 NLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGT-FKSNADFNYATLKANVDMLKLIQL 79
NL++E +I E++ +PYV +D EF GVV P T + D YA LK+NVD + +Q+
Sbjct: 5 NLDSEMGLIGEMMVQYPYVTIDVEFAGVVHHPPYTGSRPTPDEIYAALKSNVDEVPAVQI 64
Query: 80 GLTFSNEHGGLP---SLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLRRSGIDFTRHSA 136
G+T S+ G LP S PE + W+ F FD D DS++ L+ GIDF
Sbjct: 65 GITLSDAEGNLPTRSSSSPE-QEIAWEVVFSDFDAGRDPHVVDSVEFLKNQGIDFDLARQ 123
Query: 137 DGADARRFAELLMS--SGVVMNSEVRWVTFHSGYDF-XXXXXXXXXXXXPDTITGFFDLI 193
G + F E L++ E+ W F YD P+T F L+
Sbjct: 124 IGVTSTAFGEKLLAILPPPSRRGELTWSAFGGAYDMGYLLKMLTGGQPLPETRQQFMQLV 183
Query: 194 --RIYFPVVYDIKHLMRFCNS--LHGGLNKLAELLDV-ERVGICHQAGSDSLLTALSFKK 248
R+ ++D K+L+ + GL A++L V ++ G+ AG S++ A F
Sbjct: 184 KSRLGGGRIFDSKYLVEHDRQDLRNAGLRHTADVLGVRQQEGVKMLAGHKSVVAAAIFAT 243
Query: 249 LKEAYFNGLTEKYAGVL 265
++ + L G+L
Sbjct: 244 IRSQGVHLLHGVIDGIL 260
>Os10g0124200
Length = 295
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 112/275 (40%), Gaps = 37/275 (13%)
Query: 12 VEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFP--------------GVVCRPLGTFK 57
V IR V DNL E IR + FPY+ + ++P +
Sbjct: 10 VLIRRVTADNLAVEMLTIRSHLPYFPYITIHADYPVDNAAARHGRRRRRRRGGGRGNKRE 69
Query: 58 SNADFN-YATLKANVDMLKLIQLGLTFSNEHGGLPSLG---PEGRPC----VWQFNFRGF 109
S AD Y K+ VD L ++QLG+T + HG LP+ P G WQ F F
Sbjct: 70 SEADERCYRLAKSRVDELDVLQLGITLCDHHGRLPATAIACPGGAAVAVEMAWQVGFSDF 129
Query: 110 DPRTDVAAADSIDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNS---EVRWVTFHS 166
D + ++D LR +G+D A G A F + L +V + + WV F
Sbjct: 130 D-----VSQSAVDALRAAGVDLEHLRARGVPAAVFGQALRVFDIVSAANLGRLTWVAFGG 184
Query: 167 GYDFX-XXXXXXXXXXXPDTITGFFDLIRIYFPVVYDIKHLMRFCN----SLHGGLNKLA 221
YDF P+T GF +R + VVYD K++ L GGL ++A
Sbjct: 185 LYDFGFLLKMLDGGRPLPETAEGFASRLRGHLGVVYDAKYVAARLPMDGVELRGGLVRVA 244
Query: 222 ELLDVERVGI--CHQAGSDSLLTALSFKKLKEAYF 254
+L + QAG SL+ + F ++ +F
Sbjct: 245 RVLGAPAAAVEEPRQAGEKSLVASQVFIRMTGLFF 279
>Os10g0421700
Length = 1172
Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats.
Identities = 73/255 (28%), Positives = 106/255 (41%), Gaps = 32/255 (12%)
Query: 14 IREVWEDNLEAEFAVIREIVDD---FPYVAMDTEFPG-----VVCRPLGTFKSNADFNYA 65
++ VW +N +F ++ E + Y+A+D EF V RP+ + Y
Sbjct: 648 VQSVWRENCMEQFKLVLEALHQPHRHLYIAVDMEFAADAATNVSHRPVTSISC-----YQ 702
Query: 66 TLKANVDMLKLIQLGLTFS----NEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSI 121
++ V+ + Q+GLTF+ E P + E F+F P+ SI
Sbjct: 703 HMRRYVNGGGIFQMGLTFAFVGEGEQAPSPLIALE-----INFDFNVNSPKYH---GKSI 754
Query: 122 DLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXX- 180
D L G D T+HS G E L+ + V WV FH YD
Sbjct: 755 DFLSSQGHDLTQHSKRGVAPEFVYEGLLRHLPFGDGSVTWVAFHGDYDLAFLLRLLQGGD 814
Query: 181 -----XXPDTITGFFDLIRIYFPVVYDIKHLMRFC-NSLHGGLNKLAELLDVERVGICHQ 234
P + F +R FPVVYD++ L + + +G L LAE L + R G H
Sbjct: 815 HGGNCLLPPKLATFLQKVREKFPVVYDVRVLGKLVKDGFNGSLTALAEYLGIPRNGDEHH 874
Query: 235 AGSDSLLTALSFKKL 249
AGSD+LLT F K+
Sbjct: 875 AGSDALLTLSCFFKI 889
>Os06g0536000
Length = 273
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 14 IREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGT-------FKSNADFNYAT 66
+R VW DN AE A++R + Y A++ ++PG V G + A+ Y
Sbjct: 5 VRSVWADNFAAESAILRAVAPCAVYAAINVQYPGCVVSAAGGAGDHRCYYDLTAEERYQV 64
Query: 67 LKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRT--DVAAADSIDLL 124
++AN D LK +QLGL GG + W+FN FD D+ S+D L
Sbjct: 65 VRANADELKPLQLGLAVRTADGGRFA---------WEFNLNEFDLAADGDMCEPGSVDYL 115
Query: 125 RRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGY 168
R G+DF G A LL SSG ++ + W TF Y
Sbjct: 116 RHRGMDFNALPWSGVGAASLGRLLWSSG-LLAARPSWATFAGAY 158
>Os10g0421000
Length = 696
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 99/250 (39%), Gaps = 18/250 (7%)
Query: 12 VEIREVWEDNLEAEFAVIREIVDDFP------YVAMDTEFPGVVCRPLGTFKSNADFNYA 65
V ++ VW+ N F + ++D F Y+A D EF + + NY
Sbjct: 162 VSVQRVWQGNYPEMF---KPVLDAFGQPHRRIYIAFDFEFAADAFTNMHCWPGCTKTNYE 218
Query: 66 TLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADSIDLLR 125
L+ V+ ++Q+GL F E P + NF F ++I L
Sbjct: 219 YLRRYVNGGDVVQMGLAFVFEDE--VDEEPTFTAMALEINF-DFTVELRKYNGEAISFLS 275
Query: 126 RSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDF-----XXXXXXXXXX 180
G D T H G L+S NS V W+ +H YDF
Sbjct: 276 EQGHDLTEHRDRGVVPHFVYTGLLSHLPFGNSSVTWIAYHGDYDFGFFLRLLQGGCRGSS 335
Query: 181 XXPDTITGFFDLIRIYFPVVYDIKHLMRFC-NSLHGGLNKLAELLDVERVGICHQAGSDS 239
P + F +R+ FP +YDI+ L + + G L +A+LL V R G H AG D+
Sbjct: 336 HLPLELPTFLHQLRLNFPRLYDIRVLGQLVQHGFRGSLTAIADLLGVNRFGRGHHAGVDA 395
Query: 240 LLTALSFKKL 249
LLT F ++
Sbjct: 396 LLTLSCFFQI 405
>Os10g0420600
Length = 647
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 101/251 (40%), Gaps = 16/251 (6%)
Query: 14 IREVWEDNLEAEFAVIREIVDD---FPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKAN 70
++ VW +N +F ++ + + Y+A+D EF + + Y L+
Sbjct: 158 VKSVWRENYREQFKLVVDALHQPRRHLYIAVDMEFAADATTNIRRRPVTSTGCYHHLREF 217
Query: 71 VDMLKLIQLGLTFSNEHGGLPSLGPEGRPCV-WQFNFRGFDPRTDVAAADSIDLLRRSGI 129
V+ ++Q+GL F GG S P + + NF+ + + SI L R G
Sbjct: 218 VNRGDIVQMGLAFVFVGGGEQSSSSSSPPPITLEINFK-INIKARKYNKKSIAFLSRQGH 276
Query: 130 DFTRHSADGADARRFAE-LLMSSGVVMNSEVRWVTFHSGYDF-------XXXXXXXXXXX 181
D H G RRF E LL V W+ +HS YD
Sbjct: 277 DLREHRRRGVSPRRFYEGLLRHLPFGDGRSVTWLAYHSDYDLGFLLRLLQCGGRRRGGGD 336
Query: 182 XPDTITGFFDLIRIYFPVVYDIKHLMRFC--NSLHGGLNKLAELLDVERVG-ICHQAGSD 238
P + F +R FP YD++ + + + G L LAE L + R G H AGSD
Sbjct: 337 LPRQLAAFLRRLRENFPAFYDVRVIRQMLEDHGFSGKLTGLAEHLGIRRTGGAAHHAGSD 396
Query: 239 SLLTALSFKKL 249
+LLT F K+
Sbjct: 397 ALLTLSCFFKI 407
>Os06g0503900
Length = 410
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 106/251 (42%), Gaps = 19/251 (7%)
Query: 14 IREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSN------ADFNYATL 67
I VW DN +AE A + + +VA+ ++PG GT A+ Y +
Sbjct: 17 IHSVWHDNFDAESAQLLAVAPRAVHVAVSVQYPGCAVAQAGTSGRKKYGSLTAEKRYDMV 76
Query: 68 KANVDMLKLIQLGLTF-SNEHGGLPSLGPEGRPCVWQFNFRGFDPRT--DVAAADSIDLL 124
KAN+D L IQ+GL +N+ G G V++FN RGFD D+ SI L
Sbjct: 77 KANIDELHPIQVGLAIRANDDD-----GDSGELVVFEFNLRGFDINNPADLRDPASIAHL 131
Query: 125 RRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFXXXXXXXXXXXXPD 184
R G+DF R G + R LL+ S ++ + W TF Y P
Sbjct: 132 RGRGVDFGRLPCAGVEPHRLRLLLLGS-GLLQAWPSWATFTGAYHVGYLMKILTGAELPS 190
Query: 185 TITGFFDLIR-IYFPVVYDIKHLMRFCNSLHG-GLNKLAELLDVERVGICHQ--AGSDSL 240
+ F + VYD+K L N+ G L ++A + V V H A + ++
Sbjct: 191 GLDAFTTMATGTLGEGVYDVKRLAAEVNTACGFSLREIAACIGVVPVAAQHGMVASAGAV 250
Query: 241 LTALSFKKLKE 251
T FK L+E
Sbjct: 251 STLQCFKALRE 261
>Os03g0744401
Length = 106
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Query: 5 AAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGV 48
E+P VEIREVW DNLE E A+IR++VD+FP+VAMDTEFPG+
Sbjct: 52 GGEEP--VEIREVWTDNLEVELALIRDVVDEFPFVAMDTEFPGI 93
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,457,445
Number of extensions: 382413
Number of successful extensions: 741
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 716
Number of HSP's successfully gapped: 16
Length of query: 280
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 180
Effective length of database: 11,814,401
Effective search space: 2126592180
Effective search space used: 2126592180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)