BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0375000 Os09g0375000|J080316J15
(110 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0375000 Similar to Enolase (EC 4.2.1.11) (2-phosphogly... 230 2e-61
Os06g0136600 Similar to Enolase 1 (EC 4.2.1.11) (2-phosphog... 145 4e-36
Os10g0167300 Similar to Enolase 2 (EC 4.2.1.11) (2-phosphog... 144 1e-35
Os03g0248600 Similar to Enolase 2 (EC 4.2.1.11) (2-phosphog... 143 3e-35
U09450 142 5e-35
Os03g0266200 Similar to Enolase (EC 4.2.1.11) (Fragment) 123 2e-29
AK107411 114 2e-26
>Os09g0375000 Similar to Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)
(2-phospho-D- glycerate hydro-lyase)
Length = 110
Score = 230 bits (587), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/110 (100%), Positives = 110/110 (100%)
Query: 1 MISSKSNINMDCKMTKIYSTVFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNF 60
MISSKSNINMDCKMTKIYSTVFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNF
Sbjct: 1 MISSKSNINMDCKMTKIYSTVFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNF 60
Query: 61 IADLAVGLASGQIKTGAPCRSERLAKYNQLLRIEMELGNVRYAGEAFRSP 110
IADLAVGLASGQIKTGAPCRSERLAKYNQLLRIEMELGNVRYAGEAFRSP
Sbjct: 61 IADLAVGLASGQIKTGAPCRSERLAKYNQLLRIEMELGNVRYAGEAFRSP 110
>Os06g0136600 Similar to Enolase 1 (EC 4.2.1.11) (2-phosphoglycerate dehydratase
1) (2-phospho- D-glycerate hydro-lyase 1)
Length = 446
Score = 145 bits (367), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
Query: 21 VFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCR 80
+ +VNQIG+VTESI+A SK AGWGVM SHRSGETED FIADL+VGL++GQIKTGAPCR
Sbjct: 352 LLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCR 411
Query: 81 SERLAKYNQLLRIEMELGNVR-YAGEAFRSP 110
SERLAKYNQLLRIE ELG+ YAGE FR+P
Sbjct: 412 SERLAKYNQLLRIEEELGDAAVYAGEKFRAP 442
>Os10g0167300 Similar to Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase
2) (2-phospho- D-glycerate hydro-lyase 2)
Length = 446
Score = 144 bits (364), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 21 VFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCR 80
+ +VNQIG+VTESI+A SK AGWGVM SHRSGETED FIADLAVGLA+GQIKTGAPCR
Sbjct: 352 LLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCR 411
Query: 81 SERLAKYNQLLRIEMELGNVR-YAGEAFRSP 110
SERLAKYNQLLRIE ELG YAG FR+P
Sbjct: 412 SERLAKYNQLLRIEEELGAAAVYAGAKFRAP 442
>Os03g0248600 Similar to Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase
2) (2-phospho- D-glycerate hydro-lyase 2)
Length = 445
Score = 143 bits (360), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 21 VFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCR 80
+ +VNQIG+VTESI+A SK AGWGVM SHRSGETED FIADLAVGL++GQIKTGAPCR
Sbjct: 351 LLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCR 410
Query: 81 SERLAKYNQLLRIEMELGNVR-YAGEAFRSP 110
SERLAKYNQLLRIE ELG YAG FR+P
Sbjct: 411 SERLAKYNQLLRIEEELGAAAVYAGAKFRAP 441
>U09450
Length = 446
Score = 142 bits (359), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Query: 21 VFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCR 80
+ +VNQIG+VTESI+A SK AGWGVM SHRSGETED FIA+LAVGLA+GQIKTGAPCR
Sbjct: 352 LLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIAELAVGLATGQIKTGAPCR 411
Query: 81 SERLAKYNQLLRIEMELGNVR-YAGEAFRSP 110
SERLAKYNQLLRIE ELG YAG FR+P
Sbjct: 412 SERLAKYNQLLRIEEELGAAAVYAGAKFRAP 442
>Os03g0266200 Similar to Enolase (EC 4.2.1.11) (Fragment)
Length = 256
Score = 123 bits (309), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Query: 21 VFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCR 80
V + NQ+GTVTE+I+ +K A WGVMVSHRSG+T+D+FIADLAVG A+GQIK GAPCR
Sbjct: 162 VLKANQVGTVTEAIEVVRQAKDAHWGVMVSHRSGDTDDSFIADLAVGAAAGQIKAGAPCR 221
Query: 81 SERLAKYNQLLRIEMELG-NVRYAGEAFRS 109
E L+KYNQLLRIE ELG + YAGE +R+
Sbjct: 222 GECLSKYNQLLRIEEELGSDGVYAGENWRT 251
>AK107411
Length = 445
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 66/84 (78%)
Query: 21 VFQVNQIGTVTESIQAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCR 80
+ ++NQIGT++ESIQAA +++ WGVMVSHRSGETED I+DL VGL G IKTGAPCR
Sbjct: 343 LLKINQIGTISESIQAAQLAQSDNWGVMVSHRSGETEDVTISDLVVGLGVGIIKTGAPCR 402
Query: 81 SERLAKYNQLLRIEMELGNVRYAG 104
SER AKYNQLLRIE + YAG
Sbjct: 403 SERTAKYNQLLRIESLEPSAVYAG 426
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.129 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,872,758
Number of extensions: 91801
Number of successful extensions: 215
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 215
Number of HSP's successfully gapped: 7
Length of query: 110
Length of database: 17,035,801
Length adjustment: 77
Effective length of query: 33
Effective length of database: 13,015,323
Effective search space: 429505659
Effective search space used: 429505659
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 149 (62.0 bits)