Os10g0167300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho- D-glycerate hydro-lyase 2).
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Os10g0167300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Enolase 2 (EC 4.2.1.11) (2-phosphoglycerate dehydratase 2) (2-phospho- D-glycerate hydro-lyase 2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.53 | 0.334 | 14.4 | -0.0435 | 0.407 | -0.556 | -0.0651 | -0.317 | 0.132 | 23.4 | 64 | 1167 | -- | -- |
| 50.69 | 0.332 | 14.4 | -0.0156 | 0.413 | -0.579 | -0.0959 | -- | 0.128 | 23.3 | 64 | 1158 | -- | -- |
| 50.54 | 0.331 | 14.4 | -0.0423 | 0.409 | -0.557 | -- | -0.343 | 0.133 | 23.3 | 63.92 | 1158 | -- | -- |
| 50.73 | 0.332 | 14.4 | -0.0246 | 0.412 | -0.587 | -- | -- | 0.126 | 23.3 | 63.74 | 1158 | -- | -- |
| 59.29 | 0.359 | 14.4 | -0.0494 | -- | -0.45 | -- | -0.281 | 0.144 | -- | 63.75 | 1379 | -- | -- |
| 62.48 | 0.371 | 14.3 | -0.139 | 0.3 | -- | -0.199 | -- | 0.265 | 23.1 | -- | -- | -- | -- |
| 62.63 | 0.371 | 14.3 | -0.13 | 0.302 | -- | -- | -- | 0.267 | 22.9 | -- | -- | -- | -- |
| 59.44 | 0.359 | 14.4 | -0.0382 | -- | -0.465 | -- | -- | 0.141 | -- | 63.1 | 1380 | -- | -- |
| 50.74 | 0.332 | 14.4 | -- | 0.412 | -0.591 | -- | -- | 0.128 | 23.3 | 63.63 | 1158 | -- | -- |
| 68.29 | 0.386 | 14.3 | -0.124 | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
| 63.08 | 0.372 | 14.3 | -- | 0.301 | -- | -- | -- | 0.281 | 22.8 | -- | -- | -- | -- |
| 59.48 | 0.359 | 14.4 | -- | -- | -0.476 | -- | -- | 0.141 | -- | 63.19 | 1377 | -- | -- |
| 68.7 | 0.387 | 14.3 | -- | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.13 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 9 |
| 2 | 50.26 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 7 |
| 3 | 50.45 | humidity | 60 | 720 | > th | dose independent | sin | 16 | NA |
| 10 | 50.67 | humidity | 60 | 720 | > th | dose independent | rect. | 13 | 14 |
| 12 | 50.83 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 16 |
| 31 | 51.22 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 32 | 51.26 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 12 |
| 39 | 51.35 | humidity | 70 | 270 | > th | dose independent | rect. | 17 | 10 |
| 43 | 51.42 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 7 |
| 57 | 51.61 | humidity | 60 | 720 | > th | dose independent | rect. | 5 | 16 |
| 66 | 51.71 | humidity | 60 | 720 | < th | dose independent | rect. | 14 | 5 |
| 74 | 51.73 | humidity | 70 | 720 | < th | dose dependent | rect. | 15 | 17 |
| 106 | 51.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 110 | 51.87 | humidity | 60 | 720 | < th | dose independent | sin | 14 | NA |
| 115 | 51.90 | humidity | 70 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 144 | 51.98 | humidity | 60 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 164 | 52.01 | humidity | 70 | 720 | < th | dose dependent | sin | 13 | NA |
| 180 | 52.03 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 185 | 52.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 202 | 52.13 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 9 |
| 208 | 52.15 | humidity | 60 | 720 | > th | dose independent | sin | 22 | NA |
| 246 | 52.16 | humidity | 70 | 1440 | < th | dose dependent | sin | 16 | NA |
| 299 | 52.22 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 15 |
| 306 | 52.23 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 10 |
| 341 | 52.27 | temperature | 30 | 720 | < th | dose independent | sin | 21 | NA |
| 410 | 52.32 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 9 |
| 459 | 52.40 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 514 | 52.48 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 16 |
| 524 | 52.51 | temperature | 30 | 720 | < th | dose independent | sin | 16 | NA |
| 566 | 52.57 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 608 | 52.60 | temperature | 30 | 720 | < th | dose independent | rect. | 21 | 22 |
| 629 | 52.62 | temperature | 30 | 720 | > th | dose independent | sin | 13 | NA |
| 636 | 52.62 | temperature | 30 | 720 | < th | dose independent | rect. | 1 | 22 |
| 643 | 52.63 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 647 | 52.64 | temperature | 30 | 720 | < th | dose independent | rect. | 14 | 11 |
| 666 | 52.64 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 702 | 52.66 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 703 | 52.66 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 22 |
| 768 | 52.74 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 773 | 52.74 | temperature | 30 | 720 | > th | dose dependent | sin | 12 | NA |
| 835 | 52.76 | temperature | 30 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 891 | 52.81 | temperature | 30 | 720 | > th | dose independent | rect. | 15 | 4 |
| 916 | 52.82 | humidity | 60 | 1440 | < th | dose independent | no | NA | NA |