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Os03g0266200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Enolase (EC 4.2.1.11) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0148) R2 : 0.0882
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.207 (0.0311) R2dN8 : 0.114 R2N8 : 0.0882
σ : 0.278
deviance : 35.59
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21 0.215 11.2 0.49 0.325 7.79 -0.58 18.9 0.224 2.63 14.76 1361 -- --
21.29 0.217 11.1 0.368 0.333 -1.14 -0.642 -- 0.232 2.69 14.76 1361 -- --
22.11 0.219 11.2 0.522 0.32 7.97 -- 19.1 0.225 2.56 14.85 1326 -- --
21.96 0.218 11.2 0.277 0.283 -0.547 -- -- 0.177 2.81 21.42 1125 -- --
27.98 0.246 11.2 0.559 -- 8.27 -- 19.6 0.234 -- 15 1240 -- --
23.74 0.228 11.1 0.415 0.318 -- -0.529 -- 0.244 2.89 -- -- -- --
24.68 0.233 11.1 0.427 0.315 -- -- -- 0.248 2.7 -- -- -- --
26.45 0.24 11.2 0.273 -- -0.61 -- -- 0.173 -- 22.05 1047 -- --
23.65 0.227 11.2 -- 0.289 -0.662 -- -- 0.135 2.77 19.88 2562 -- --
30.46 0.258 11.1 0.441 -- -- -- -- 0.256 -- -- -- -- --
29.49 0.254 11.1 -- 0.324 -- -- -- 0.2 2.71 -- -- -- --
28.1 0.247 11.2 -- -- -0.806 -- -- 0.128 -- 21.64 1075 -- --
35.59 0.278 11.1 -- -- -- -- -- 0.207 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.10 temperature 15.0 720 > th dose independent rect. 18 6
2 20.27 temperature 15.0 720 > th dose dependent rect. 12 1
3 20.28 temperature 15.0 720 > th dose independent rect. 12 10
5 20.35 temperature 15.0 1440 > th dose independent rect. 13 1
6 20.39 atmosphere 1010.0 720 < th dose independent rect. 10 5
7 20.42 temperature 15.0 270 > th dose independent rect. 18 13
8 20.51 temperature 15.0 1440 > th dose independent rect. 6 19
11 20.52 temperature 15.0 720 > th dose independent rect. 10 14
12 20.54 temperature 15.0 10 > th dose independent rect. 19 23
15 20.62 atmosphere 1015.0 90 < th dose dependent rect. 19 14
29 20.74 temperature 15.0 10 > th dose independent rect. 23 23
32 20.80 atmosphere 1010.0 720 < th dose independent rect. 12 1
36 20.81 temperature 15.0 10 > th dose independent rect. 12 12
38 20.81 atmosphere 1010.0 10 < th dose independent rect. 12 12
39 20.82 atmosphere 1015.0 1440 > th dose independent rect. 24 4
48 20.83 temperature 15.0 1440 > th dose independent rect. 21 2
52 20.83 atmosphere 1015.0 1440 > th dose dependent rect. 24 2
57 20.86 temperature 20.0 720 < th dose dependent rect. 11 3
68 20.88 temperature 15.0 720 > th dose independent rect. 12 18
75 20.90 temperature 15.0 30 > th dose independent rect. 1 23
80 20.91 temperature 15.0 4320 < th dose dependent rect. 2 2
83 20.92 temperature 10.0 720 > th dose dependent rect. 10 5
94 20.95 temperature 15.0 4320 < th dose dependent rect. 1 5
105 20.97 temperature 15.0 30 > th dose independent rect. 9 23
117 21.00 temperature 15.0 1440 > th dose independent sin 19 NA
119 21.00 atmosphere 1010.0 270 < th dose independent rect. 10 13
122 21.00 temperature 15.0 1440 < th dose dependent rect. 2 22
124 21.01 temperature 15.0 1440 < th dose independent sin 19 NA
126 21.01 temperature 15.0 1440 > th dose independent rect. 15 9
128 21.01 temperature 15.0 10 > th dose independent rect. 12 14
131 21.01 temperature 15.0 1440 < th dose independent rect. 10 15
132 21.01 temperature 15.0 1440 < th dose independent rect. 4 20
134 21.01 temperature 15.0 1440 < th dose dependent rect. 9 16
136 21.01 temperature 20.0 720 < th dose dependent rect. 12 17
142 21.02 temperature 15.0 1440 < th dose independent rect. 23 2
150 21.02 temperature 15.0 1440 < th dose dependent sin 16 NA
154 21.02 temperature 15.0 1440 < th dose dependent rect. 18 8
167 21.03 temperature 15.0 1440 > th dose independent rect. 13 3
168 21.03 radiation 1.0 720 < th dose independent rect. 10 5
170 21.03 temperature 15.0 1440 < th dose independent rect. 13 13
178 21.03 radiation 1.0 720 < th dose dependent rect. 10 5
195 21.04 temperature 15.0 1440 < th dose dependent sin 1 NA
206 21.05 temperature 15.0 1440 < th dose independent sin 0 NA
208 21.05 humidity 90.0 720 < th dose independent rect. 12 1
238 21.05 temperature 15.0 30 > th dose independent rect. 3 23
242 21.05 temperature 15.0 1440 < th dose dependent rect. 23 1
271 21.05 temperature 15.0 1440 < th dose dependent rect. 2 19
282 21.06 temperature 15.0 1440 < th dose independent rect. 3 17
288 21.06 temperature 15.0 270 > th dose independent rect. 1 23
305 21.06 atmosphere 1000.0 270 > th dose dependent rect. 14 14
307 21.06 temperature 15.0 1440 < th dose dependent rect. 3 16
325 21.07 temperature 15.0 1440 < th dose independent rect. 4 15
336 21.07 temperature 15.0 30 > th dose dependent rect. 12 12
344 21.08 precipitation 0.1 1440 < th dose independent rect. 15 1
358 21.08 temperature 15.0 4320 < th dose dependent rect. 5 1
359 21.08 precipitation 0.1 1440 < th dose dependent rect. 15 1
366 21.08 temperature 15.0 1440 < th dose dependent rect. 4 14
407 21.10 radiation 1.0 720 < th dose independent rect. 12 3
410 21.10 temperature 15.0 1440 < th dose independent rect. 4 11
418 21.10 radiation 1.0 720 < th dose dependent rect. 12 3
433 21.11 temperature 20.0 720 < th dose independent rect. 12 1
442 21.11 humidity 90.0 720 > th dose dependent rect. 13 1
455 21.11 temperature 15.0 1440 < th dose dependent rect. 4 11
492 21.12 temperature 15.0 270 > th dose independent rect. 16 23
498 21.12 temperature 10.0 720 > th dose dependent rect. 3 12
523 21.13 humidity 90.0 720 > th dose independent rect. 12 2
540 21.13 temperature 25.0 720 < th dose dependent rect. 6 13
592 21.15 atmosphere 1010.0 720 > th dose independent sin 22 NA
594 21.15 precipitation 0.1 1440 > th dose independent rect. 12 1
596 21.15 precipitation 0.1 720 > th dose independent rect. 15 2
604 21.15 atmosphere 1010.0 720 > th dose independent rect. 6 16
609 21.15 temperature 15.0 1440 < th dose dependent no NA NA
610 21.15 temperature 20.0 720 < th dose dependent rect. 13 1
611 21.15 temperature 20.0 720 < th dose dependent rect. 15 1
613 21.15 precipitation 0.1 1440 > th dose dependent rect. 12 1
618 21.15 precipitation 0.1 720 > th dose dependent rect. 15 2
633 21.15 temperature 15.0 1440 < th dose dependent rect. 17 22
645 21.16 precipitation 0.1 720 > th dose independent rect. 10 9
647 21.16 atmosphere 1010.0 720 > th dose independent rect. 7 14
689 21.17 precipitation 0.1 720 > th dose independent rect. 10 7
692 21.17 atmosphere 1010.0 720 > th dose independent rect. 8 11
724 21.18 radiation 1.0 1440 > th dose independent rect. 10 3
726 21.18 atmosphere 1010.0 720 > th dose independent rect. 9 8
731 21.18 temperature 25.0 720 < th dose dependent sin 0 NA
738 21.18 humidity 90.0 720 > th dose dependent rect. 11 6
750 21.18 temperature 15.0 1440 < th dose dependent rect. 21 23
754 21.19 temperature 15.0 1440 > th dose independent rect. 16 4
758 21.19 temperature 15.0 1440 < th dose independent rect. 4 8
862 21.21 atmosphere 1015.0 30 < th dose dependent rect. 19 16
865 21.21 temperature 15.0 30 > th dose dependent rect. 5 19
873 21.22 temperature 15.0 1440 > th dose independent rect. 15 2
892 21.22 humidity 90.0 720 > th dose dependent rect. 13 4
916 21.23 temperature 15.0 90 > th dose independent sin 10 NA
919 21.23 temperature 15.0 90 > th dose independent sin 16 NA
940 21.23 temperature 15.0 1440 > th dose independent rect. 6 12
942 21.23 atmosphere 1010.0 10 < th dose independent rect. 12 14
972 21.23 humidity 90.0 720 > th dose dependent rect. 11 8