BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0108600 Os09g0108600|AK063547
(288 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0108600 Similar to Aldose 1-epimerase-like protein 596 e-171
Os10g0155500 Similar to Aldose 1-epimerase-like protein 449 e-127
AK061152 447 e-126
Os02g0575800 Aldose 1-epimerase family protein 293 8e-80
Os03g0381000 Similar to Aldose 1-epimerase-like protein 288 2e-78
Os04g0458300 Similar to Non-cell-autonomous protein pathway2 286 8e-78
Os04g0458600 Similar to Non-cell-autonomous protein pathway2 284 7e-77
AK110564 77 1e-14
>Os09g0108600 Similar to Aldose 1-epimerase-like protein
Length = 288
Score = 596 bits (1536), Expect = e-171, Method: Compositional matrix adjust.
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 LRLENGTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVA 60
LRLENGTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVA
Sbjct: 1 LRLENGTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVA 60
Query: 61 EYVKGENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQ 120
EYVKGENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQ
Sbjct: 61 EYVKGENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQ 120
Query: 121 HTYWNLAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRID 180
HTYWNLAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRID
Sbjct: 121 HTYWNLAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRID 180
Query: 181 QVPGGYDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNFLNGIVGKG 240
QVPGGYDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNFLNGIVGKG
Sbjct: 181 QVPGGYDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNFLNGIVGKG 240
Query: 241 GAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFSTK 288
GAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFSTK
Sbjct: 241 GAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFSTK 288
>Os10g0155500 Similar to Aldose 1-epimerase-like protein
Length = 362
Score = 449 bits (1156), Expect = e-127, Method: Compositional matrix adjust.
Identities = 206/281 (73%), Positives = 243/281 (86%), Gaps = 1/281 (0%)
Query: 6 GTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKG 65
G SPYFGCIVGRVANRIK+GKFTLN +YSLAINN PN+LHGG KGFDK++W+V E K
Sbjct: 82 GISPYFGCIVGRVANRIKEGKFTLNGVEYSLAINNGPNSLHGGLKGFDKVVWDVVER-KS 140
Query: 66 ENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHTYWN 125
E PSITF+Y+SKDGEEG+PGDV+V A YS+ STTL+L+MEA+ NKATPI+LAQHTYWN
Sbjct: 141 ECPSITFQYHSKDGEEGYPGDVTVRATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWN 200
Query: 126 LAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRIDQVPGG 185
LAGHNSGD L H++QI G ITPVDE +IPTGE+MPV G+PF+F TE IG+RI+ VPGG
Sbjct: 201 LAGHNSGDTLDHSIQIWGKHITPVDENTIPTGEIMPVKGTPFDFTTEHKIGARINDVPGG 260
Query: 186 YDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNFLNGIVGKGGAVYG 245
YDHN+V+D GE K+GL H AK+ D S+SR LD+W DAPG+QFYT N+++G+ GKGGAVYG
Sbjct: 261 YDHNYVLDSGEEKNGLKHAAKLKDSSNSRTLDLWTDAPGMQFYTANYVDGVTGKGGAVYG 320
Query: 246 KHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFS 286
KH+G+CLETQGFPNA+NQPNFPSVVVQPGEKY HTMLFEFS
Sbjct: 321 KHSGVCLETQGFPNAINQPNFPSVVVQPGEKYKHTMLFEFS 361
>AK061152
Length = 333
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 206/281 (73%), Positives = 243/281 (86%), Gaps = 1/281 (0%)
Query: 6 GTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKG 65
G SPYFGCIVGRVANRIK+GKFTLN +YSLAINN PN+LHGG KGFDK++W+V E K
Sbjct: 53 GISPYFGCIVGRVANRIKEGKFTLNGVEYSLAINNGPNSLHGGLKGFDKVVWDVVER-KS 111
Query: 66 ENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHTYWN 125
E PSITF+Y+SKDGEEG+PGDV+V A YS+ STTL+L+MEA+ NKATPI+LAQHTYWN
Sbjct: 112 ECPSITFQYHSKDGEEGYPGDVTVRATYSLPDSTTLRLDMEAVAENKATPINLAQHTYWN 171
Query: 126 LAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRIDQVPGG 185
LAGHNSGD L H++QI G ITPVDE +IPTGE+MPV G+PF+F TE IG+RI+ VPGG
Sbjct: 172 LAGHNSGDTLDHSIQIWGKHITPVDENTIPTGEIMPVKGTPFDFTTEHKIGARINDVPGG 231
Query: 186 YDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNFLNGIVGKGGAVYG 245
YDHN+V+D GE K+GL H AK+ D S+SR LD+W DAPG+QFYT N+++G+ GKGGAVYG
Sbjct: 232 YDHNYVLDSGEEKNGLKHAAKLKDSSNSRTLDLWTDAPGMQFYTANYVDGVTGKGGAVYG 291
Query: 246 KHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFS 286
KH+G+CLETQGFPNA+NQPNFPSVVVQPGEKY HTMLFEFS
Sbjct: 292 KHSGVCLETQGFPNAINQPNFPSVVVQPGEKYKHTMLFEFS 332
>Os02g0575800 Aldose 1-epimerase family protein
Length = 378
Score = 293 bits (751), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 199/295 (67%), Gaps = 14/295 (4%)
Query: 5 NGTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVK 64
NGT+ YFG ++GRVANRI + +FTL+ K Y L N+ N+LHGG +GF K+IW V E+V
Sbjct: 84 NGTA-YFGGLIGRVANRIANARFTLDGKTYRLFRNDGNNSLHGGHRGFSKVIWTVKEHVA 142
Query: 65 G-ENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHTY 123
G ++P IT Y+S DGE+GFPGD+ V Y + L + M A KATP++LA H Y
Sbjct: 143 GGDSPRITLYYHSFDGEQGFPGDLDVFVTYELPRPYVLAVRMNATARGKATPVNLAHHAY 202
Query: 124 WNLAGHNSG--DVLAHTVQILGSQITPVDE-TSIPTGEMMPVSGSPFNFLTETTIGSRI- 179
WNLAG SG VLA TV+I S+ TPVD T IPTG + PV+G+P++FL +G+RI
Sbjct: 203 WNLAGEGSGAASVLAETVRIHASRYTPVDAATLIPTGRVAPVAGTPYDFLAGAPVGARIV 262
Query: 180 -DQVPGG----YDHNFVIDCGEV---KSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGN 231
VPGG YD N+ +D + L VA+V D ++ R +++WAD PGVQFYT N
Sbjct: 263 GAAVPGGAVSGYDTNYAVDGAAADGERRRLRPVAEVRDGATGRAMEVWADQPGVQFYTSN 322
Query: 232 FLNGIVGKGGAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFS 286
L G+ GKGG VYG++ LCLETQGFP+AVN P+FPS +V+PG+ Y H M+F+F+
Sbjct: 323 GLAGVRGKGGRVYGRYGALCLETQGFPDAVNHPSFPSQIVRPGQVYEHNMVFKFT 377
>Os03g0381000 Similar to Aldose 1-epimerase-like protein
Length = 376
Score = 288 bits (738), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/280 (50%), Positives = 186/280 (66%), Gaps = 3/280 (1%)
Query: 10 YFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKGENPS 69
YFG +VGRVANRI G+FT+ + N+ NTLHGG +GF+++ W V E G P
Sbjct: 93 YFGALVGRVANRIAGGRFTVKGHAFHTYKNDGKNTLHGGHRGFNQVFWSVRERATGHFPY 152
Query: 70 ITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLN--KATPISLAQHTYWNLA 127
ITF Y S DGE+GFPG + V Y I + + M A P++ K TP++LAQHTYWNL
Sbjct: 153 ITFYYRSYDGEQGFPGALDVLVTYKIDGDYSFSVTMYARPVDDGKPTPVNLAQHTYWNLR 212
Query: 128 GHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRIDQVPGG-Y 186
GH +G +L H+VQI S +TPV IPTG + PVSG+PF+F G+RI VPGG Y
Sbjct: 213 GHGNGTILDHSVQIFASAVTPVGAGLIPTGAVSPVSGTPFDFRAPAPPGARIADVPGGGY 272
Query: 187 DHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNFLNGIVGKGGAVYGK 246
D N+V+D G+ A V++P+S RVL++W+D PG+QFYTGNFL G GKGGA Y K
Sbjct: 273 DINYVLDGEADGQGVRKAAVVSEPTSGRVLELWSDQPGLQFYTGNFLKGDEGKGGARYVK 332
Query: 247 HAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFS 286
H GLCLETQ +P+AV+ FP+ + + G++Y H ML++FS
Sbjct: 333 HGGLCLETQDYPDAVHNAKFPTEIYRKGQEYKHYMLYKFS 372
>Os04g0458300 Similar to Non-cell-autonomous protein pathway2
Length = 380
Score = 286 bits (733), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 189/296 (63%), Gaps = 16/296 (5%)
Query: 7 TSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKG- 65
+S YFG +VGRVANRI +F L+ K Y L N+ NTLHGG +GF + W V E+V G
Sbjct: 84 SSTYFGALVGRVANRIAKARFVLDGKAYHLYPNDGKNTLHGGHRGFSNVTWTVKEHVGGG 143
Query: 66 ENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHTYWN 125
+ P IT Y+S DGE+GFPG + V Y + L + M A KATP++LAQH+YWN
Sbjct: 144 DAPYITLYYHSFDGEQGFPGALDVYVTYQLSGPYVLSVHMNATAAGKATPVNLAQHSYWN 203
Query: 126 LAGHNSGDVLAHTVQILGSQITPVDETSIPTGEMMPVSGSPFNFLTETTIGSRIDQVPG- 184
L G SGD+L +TVQ+ S+ TPVD IPTG++ PV+G+P + T +G+R+ V G
Sbjct: 204 LGGTGSGDILGNTVQLFASRYTPVDAELIPTGQVAPVTGTPCDLRAPTPVGARVHLVTGG 263
Query: 185 ---------GYDHNFVIDCGEVKSGLCH----VAKVTDPSSSRVLDIWADAPGVQFYTGN 231
G+D N+ +D G+ H V V D S R L++WA+ PGVQFYTGN
Sbjct: 264 LSKTGATIYGFDTNYAVDGGDDVDAHAHALRRVTVVRDGKSGRSLELWANQPGVQFYTGN 323
Query: 232 FLNGIV-GKGGAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFS 286
FL V GKGG YG++ LCLETQGFP+AVN PNFPSV+V+PG+ Y H M+++FS
Sbjct: 324 FLTADVKGKGGKAYGQYGALCLETQGFPDAVNHPNFPSVIVRPGQVYKHEMVYKFS 379
>Os04g0458600 Similar to Non-cell-autonomous protein pathway2
Length = 362
Score = 284 bits (726), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/289 (49%), Positives = 188/289 (65%), Gaps = 10/289 (3%)
Query: 4 ENGTSPYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYV 63
E + YFG + GRV RI G+F L+ K Y IN+ N +HGG +GF K+IW V EYV
Sbjct: 77 EYNDTNYFGPVTGRVGQRIARGRFVLDGKVYHTYINDGRNAIHGGHRGFSKVIWTVKEYV 136
Query: 64 KG-ENPSITFKYYSKDGEEGFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHT 122
G ++P IT Y S DGE+GFPGD+ Y + + L L M A LNKATP++ QHT
Sbjct: 137 GGGDSPYITLYYRSFDGEQGFPGDLDAYVTYQLSSPYVLALRMNATALNKATPVNFLQHT 196
Query: 123 YWNLAGHNSGDVLAHTVQILGSQITPVDETSIPT-GEMMPVSGSPFNFLTETTIGSRIDQ 181
YWNL G GDVL HT+Q+ S+ TP+ E +P+ G + PV+G+P++F T IG+RI Q
Sbjct: 197 YWNLGGQGRGDVLGHTLQLSASRYTPLHEELLPSSGVVAPVAGTPYDFRHPTPIGARIRQ 256
Query: 182 VPGG----YDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNFLNGIV 237
V GG YD N+VID GE G+ VA D +S R L++WA+ P +Q YTGN+LN I
Sbjct: 257 VMGGRIAGYDINYVID-GE---GMRKVAAARDGASGRALELWANQPAMQLYTGNWLNNIK 312
Query: 238 GKGGAVYGKHAGLCLETQGFPNAVNQPNFPSVVVQPGEKYSHTMLFEFS 286
GKGG VY ++ G CLETQG+ +AVN P FPS+ V+PG+ Y H M F+FS
Sbjct: 313 GKGGKVYQQYGGFCLETQGYVDAVNHPEFPSMTVRPGQVYRHDMAFKFS 361
>AK110564
Length = 377
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 35/307 (11%)
Query: 9 PYFGCIVGRVANRIKDGKFTLNDKQYSLAINNPPNTLHGGFKGFDKIIWEVAEYVKGENP 68
P + I GR NRI +G++++++ Y N+ PNTLH G + W+V N
Sbjct: 77 PVYNAIPGRYVNRIGNGEYSIDNVTYHTQKNDGPNTLHSGTNNWSFRNWDVTSVT---NS 133
Query: 69 SITFKYYSKDGEE-GFPGDVSVTARYSILASTTLKLEMEAIPLNKATPISLAQHTYWNLA 127
SITF K G GDVS + Y++ + + M+A ++ TPI L QHTY+ L
Sbjct: 134 SITFSILDKSNSSLGMIGDVSASVTYTV-SKNKWSIVMDAESKDQKTPIMLTQHTYFQLD 192
Query: 128 GHNSGD---VLAHTVQI-LGSQITPVDETSIPTGEMMPVS-GSPFNFLTE------TTIG 176
D + HT+ + ++ D ++PTG + VS G +F + +
Sbjct: 193 AFARPDNRTIWNHTMYMPEAKRVMLADGNALPTGVIANVSAGDISDFWSAPHELGFASGN 252
Query: 177 SRIDQVPG----GYDHNFVIDCGEVKSGLCHVAKVTDPSSSRVLDIWADAPGVQFYTGNF 232
+ + G GY+ N+ + KS V ++ S D+ D V YT N+
Sbjct: 253 ANFENNCGNGCHGYNGNWAFNDSRNKSET--VLTLSSEWSGIKADLVTDQDAVVLYTCNW 310
Query: 233 ---------LNGIVGKGGAVYGKHAGLCLETQGFPNAVNQPNFPSV---VVQPGEKYSHT 280
G+ G+ + + + +E Q + + +N P + + + G++Y
Sbjct: 311 NDGKTEFKSTQGVTGQDKFI-PRDGCIAIEAQDYVDGINHPEWGRLGKQIFAKGQQYHWA 369
Query: 281 MLFEFST 287
+ F T
Sbjct: 370 SSWTFGT 376
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,010,488
Number of extensions: 490052
Number of successful extensions: 938
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 924
Number of HSP's successfully gapped: 8
Length of query: 288
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 188
Effective length of database: 11,814,401
Effective search space: 2221107388
Effective search space used: 2221107388
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)