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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0381000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Aldose 1-epimerase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.75 (0.0183) R2 : 0.0324
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.15 (0.0384) R2dN8 : 0.0418 R2N8 : 0.0324
σ : 0.344
deviance : 54.28
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.99 0.332 2.77 -0.0774 0.0418 -0.424 -0.0566 1.5 0.138 18.5 1.047 16 -- --
51.85 0.335 2.75 -0.0302 0.0374 -0.301 0.128 -- 0.154 17.5 1.197 16 -- --
50 0.329 2.77 -0.0763 0.0426 -0.426 -- 1.49 0.138 18 1.049 16 -- --
51.88 0.335 2.75 -0.017 0.0303 -0.293 -- -- 0.156 17.5 1.2 16 -- --
50.08 0.33 2.77 -0.0738 -- -0.403 -- 1.46 0.137 -- 1.043 16 -- --
53.96 0.344 2.75 0.0189 0.0642 -- -0.145 -- 0.15 3.12 -- -- -- --
54.02 0.344 2.75 0.0219 0.065 -- -- -- 0.151 3.62 -- -- -- --
51.92 0.336 2.75 -0.0159 -- -0.278 -- -- 0.155 -- 1.137 16 -- --
51.88 0.335 2.75 -- 0.0297 -0.289 -- -- 0.158 17.9 1.2 16 -- --
54.26 0.344 2.75 0.0246 -- -- -- -- 0.153 -- -- -- -- --
54.04 0.344 2.75 -- 0.0654 -- -- -- 0.149 3.62 -- -- -- --
51.92 0.336 2.75 -- -- -0.276 -- -- 0.157 -- 1.128 16 -- --
54.28 0.344 2.75 -- -- -- -- -- 0.15 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.99 wind 3.0 30 < th dose dependent rect. 2 1
2 44.99 temperature 20.0 30 > th dose dependent rect. 2 1
3 44.99 atmosphere 1005.0 30 > th dose dependent rect. 2 1
4 45.00 wind 3.0 30 < th dose independent rect. 2 1
7 45.00 temperature 20.0 30 > th dose independent rect. 2 1
8 45.00 atmosphere 1005.0 30 > th dose independent rect. 2 1
12 45.00 temperature 10.0 30 > th dose dependent rect. 2 1
14 45.00 atmosphere 995.0 30 > th dose dependent rect. 2 1
18 45.01 temperature 10.0 30 > th dose independent rect. 2 1
20 45.01 temperature 25.0 30 < th dose independent rect. 2 1
22 45.01 humidity 50.0 30 > th dose independent rect. 2 1
27 45.01 atmosphere 995.0 30 > th dose independent rect. 2 1
29 45.01 atmosphere 1010.0 30 < th dose independent rect. 2 1
31 45.01 radiation 1.0 30 < th dose independent rect. 2 1
36 45.01 precipitation 0.1 30 < th dose independent rect. 2 1
37 45.01 temperature 10.0 30 > th dose independent rect. 3 23
38 45.01 humidity 50.0 30 > th dose dependent rect. 2 1
42 45.01 radiation 1.0 30 < th dose dependent rect. 2 1
47 45.01 precipitation 0.1 30 < th dose dependent rect. 2 1
49 45.03 atmosphere 1015.0 30 < th dose dependent rect. 2 1
50 45.04 temperature 30.0 30 < th dose dependent rect. 2 1
57 45.10 wind 1.0 30 > th dose independent rect. 2 1
58 45.10 precipitation 0.1 30 < th dose independent rect. 3 23
60 45.10 precipitation 0.1 30 < th dose dependent rect. 3 23
102 45.18 atmosphere 995.0 30 > th dose independent rect. 3 23
113 45.44 radiation 10.0 14400 < th dose dependent rect. 3 1
119 45.45 wind 9.0 1440 < th dose independent rect. 3 1
120 45.45 temperature 10.0 1440 > th dose independent rect. 3 1
123 45.45 temperature 30.0 1440 < th dose independent rect. 3 1
127 45.45 humidity 50.0 1440 > th dose independent rect. 3 1
136 45.45 atmosphere 995.0 1440 > th dose independent rect. 3 1
137 45.45 radiation 1.0 1440 < th dose independent rect. 3 1
157 45.45 wind 9.0 30 < th dose independent rect. 3 23
158 45.45 temperature 10.0 1440 > th dose independent rect. 4 23
162 45.45 radiation 1.0 1440 < th dose dependent rect. 3 1
191 47.04 humidity 50.0 30 > th dose independent rect. 3 23
217 48.30 atmosphere 1015.0 30 < th dose independent rect. 3 23
285 49.33 temperature 30.0 30 < th dose independent rect. 3 23
294 49.48 humidity 90.0 90 < th dose independent rect. 2 1
298 49.62 wind 1.0 10 < th dose independent rect. 6 21
304 49.69 wind 1.0 30 > th dose independent rect. 3 23
318 49.78 wind 1.0 10 > th dose independent sin 15 NA
328 49.89 temperature 10.0 720 > th dose independent rect. 7 8
329 49.89 atmosphere 1015.0 720 < th dose independent rect. 7 8
330 49.89 temperature 10.0 720 > th dose independent rect. 15 16
367 50.03 atmosphere 995.0 720 > th dose independent rect. 7 8
371 50.06 temperature 10.0 720 > th dose independent rect. 19 8
372 50.06 temperature 30.0 720 < th dose independent rect. 19 8
373 50.06 humidity 50.0 720 > th dose independent rect. 19 8
374 50.06 atmosphere 995.0 720 > th dose independent rect. 19 8
375 50.06 radiation 1.0 720 < th dose independent rect. 19 8
380 50.06 temperature 10.0 720 > th dose independent rect. 3 16
382 50.06 radiation 1.0 720 < th dose dependent rect. 19 8
387 50.07 precipitation 0.1 720 < th dose independent rect. 19 8
389 50.07 precipitation 0.1 720 < th dose dependent rect. 19 8
395 50.11 wind 9.0 720 < th dose independent rect. 19 8
398 50.12 precipitation 0.1 720 < th dose independent rect. 7 8
399 50.12 wind 1.0 10 > th dose independent rect. 17 23
401 50.12 precipitation 0.1 720 < th dose dependent rect. 7 8
405 50.18 atmosphere 995.0 720 > th dose independent rect. 15 16
423 50.24 radiation 10.0 30 < th dose dependent rect. 3 23
431 50.32 atmosphere 995.0 720 > th dose independent rect. 3 16
436 50.34 wind 1.0 30 > th dose dependent rect. 2 1
441 50.37 wind 9.0 30 < th dose dependent rect. 3 23
442 50.38 atmosphere 1015.0 1440 < th dose independent rect. 3 1
444 50.40 wind 1.0 10 > th dose independent rect. 21 23
454 50.53 temperature 25.0 270 > th dose independent rect. 23 4
460 50.59 radiation 1.0 30 < th dose independent rect. 3 23
471 50.64 wind 1.0 10 > th dose independent no NA NA
472 50.64 precipitation 0.1 720 < th dose independent rect. 15 16
474 50.64 precipitation 0.1 720 < th dose dependent rect. 15 16
486 50.75 radiation 40.0 720 < th dose independent rect. 15 16
494 50.84 wind 1.0 10 < th dose independent rect. 2 5
501 50.87 temperature 25.0 270 > th dose dependent rect. 23 4
503 50.88 atmosphere 1015.0 720 < th dose independent rect. 3 16
515 50.94 precipitation 0.1 720 < th dose independent rect. 3 16
516 50.94 precipitation 0.1 720 < th dose dependent rect. 3 16
550 51.06 temperature 10.0 30 > th dose dependent rect. 3 23
599 51.15 wind 1.0 10 < th dose independent sin 15 NA
649 51.31 humidity 50.0 720 > th dose independent rect. 7 8
654 51.32 wind 3.0 30 < th dose dependent rect. 2 5
655 51.33 wind 1.0 10 > th dose independent rect. 7 23
659 51.34 wind 9.0 720 < th dose independent rect. 7 8
734 51.42 temperature 10.0 720 > th dose independent rect. 9 8
735 51.42 atmosphere 1015.0 720 < th dose independent rect. 9 8
736 51.42 radiation 1.0 720 < th dose independent rect. 21 8
738 51.42 temperature 10.0 720 > th dose independent rect. 17 16
746 51.42 radiation 10.0 720 < th dose dependent rect. 21 8
761 51.44 temperature 10.0 720 > th dose independent rect. 21 8
762 51.44 temperature 30.0 720 < th dose independent rect. 21 8
763 51.44 humidity 50.0 720 > th dose independent rect. 21 8
766 51.44 atmosphere 995.0 720 > th dose independent rect. 21 8
770 51.44 temperature 10.0 720 > th dose independent rect. 5 16
774 51.45 atmosphere 995.0 720 > th dose independent rect. 17 16
782 51.47 wind 1.0 10 > th dose independent rect. 18 12
825 51.48 atmosphere 995.0 720 > th dose independent rect. 9 8
859 51.51 atmosphere 995.0 720 > th dose independent rect. 5 16
863 51.51 atmosphere 1005.0 90 > th dose dependent rect. 1 5
866 51.52 wind 1.0 10 > th dose independent rect. 22 13
867 51.52 wind 9.0 720 < th dose independent rect. 15 16
906 51.61 wind 9.0 720 < th dose independent rect. 21 8
908 51.62 precipitation 0.1 720 < th dose independent rect. 21 8
910 51.62 precipitation 0.1 720 < th dose dependent rect. 21 8
912 51.63 humidity 60.0 30 > th dose independent rect. 16 1
913 51.63 atmosphere 1005.0 30 > th dose independent rect. 16 1
915 51.63 atmosphere 1005.0 30 > th dose dependent rect. 16 1
918 51.64 temperature 30.0 30 < th dose independent rect. 16 1
960 51.67 precipitation 0.1 720 < th dose independent rect. 9 8
965 51.67 precipitation 0.1 720 < th dose dependent rect. 9 8
980 51.69 wind 5.0 30 > th dose dependent rect. 16 1
981 51.69 humidity 50.0 30 > th dose dependent rect. 16 1