Os09g0108600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldose 1-epimerase-like protein.
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Os09g0108600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldose 1-epimerase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 102.53 | 0.476 | 5.47 | 0.623 | 0.724 | -0.92 | 0.179 | -1.28 | 0.0322 | 17.6 | 21.49 | 2701 | -- | -- |
| 104.85 | 0.477 | 5.51 | 0.404 | 0.69 | -0.722 | 0.224 | -- | -0.0089 | 17.5 | 22 | 2315 | -- | -- |
| 102.6 | 0.472 | 5.47 | 0.62 | 0.726 | -0.922 | -- | -1.28 | 0.0321 | 17.6 | 21.49 | 2709 | -- | -- |
| 104.72 | 0.477 | 5.52 | 0.371 | 0.697 | -0.754 | -- | -- | -0.0383 | 17.5 | 22.01 | 2318 | -- | -- |
| 125.85 | 0.522 | 5.46 | 0.761 | -- | -0.793 | -- | -1.26 | 0.0398 | -- | 21.96 | 1971 | -- | -- |
| 123.59 | 0.521 | 5.47 | 0.703 | 0.695 | -- | 0.232 | -- | 0.207 | 17.9 | -- | -- | -- | -- |
| 123.72 | 0.521 | 5.47 | 0.702 | 0.697 | -- | -- | -- | 0.208 | 17.8 | -- | -- | -- | -- |
| 129.27 | 0.53 | 5.51 | 0.362 | -- | -0.753 | -- | -- | -0.0629 | -- | 22.03 | 2085 | -- | -- |
| 107.18 | 0.482 | 5.54 | -- | 0.708 | -0.904 | -- | -- | -0.113 | 17.7 | 21.7 | 3045 | -- | -- |
| 148.88 | 0.57 | 5.46 | 0.68 | -- | -- | -- | -- | 0.192 | -- | -- | -- | -- | -- |
| 136.7 | 0.547 | 5.48 | -- | 0.686 | -- | -- | -- | 0.13 | 17.9 | -- | -- | -- | -- |
| 131.88 | 0.535 | 5.52 | -- | -- | -0.885 | -- | -- | -0.123 | -- | 21.7 | 2084 | -- | -- |
| 161.09 | 0.592 | 5.47 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 5 | 97.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 21 |
| 6 | 97.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 19 |
| 58 | 100.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 78 | 100.66 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 98 | 101.14 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 102 | 101.19 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 117 | 101.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 121 | 101.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 126 | 101.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 129 | 101.76 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 11 |
| 141 | 101.88 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 146 | 101.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 159 | 102.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 162 | 102.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 11 |
| 259 | 102.63 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 277 | 102.73 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 290 | 102.82 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 308 | 102.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 310 | 102.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 311 | 102.92 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 324 | 103.01 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 458 | 103.48 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 486 | 103.59 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 550 | 103.76 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 586 | 103.87 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 601 | 103.90 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 622 | 103.95 | wind | 9 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 635 | 103.99 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 656 | 104.05 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 829 | 104.37 | wind | 3 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 857 | 104.41 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 869 | 104.43 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 910 | 104.49 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 916 | 104.51 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 954 | 104.57 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 7 |