BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0540000 Os08g0540000|AK070813
(344 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0540000 Protein of unknown function DUF914, eukaryotic... 658 0.0
Os09g0513200 Protein of unknown function DUF914, eukaryotic... 495 e-140
Os05g0299500 Protein of unknown function DUF914, eukaryotic... 431 e-121
Os05g0444300 Protein of unknown function DUF914, eukaryotic... 279 2e-75
Os05g0299650 155 4e-38
Os05g0444400 143 1e-34
>Os08g0540000 Protein of unknown function DUF914, eukaryotic family protein
Length = 344
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/344 (94%), Positives = 326/344 (94%)
Query: 1 MAPPLLPAAEEDGGCVARWMRRDVLLGLALGQFVSLLITSTGFSSSELARRGINAPTSQX 60
MAPPLLPAAEEDGGCVARWMRRDVLLGLALGQFVSLLITSTGFSSSELARRGINAPTSQ
Sbjct: 1 MAPPLLPAAEEDGGCVARWMRRDVLLGLALGQFVSLLITSTGFSSSELARRGINAPTSQS 60
Query: 61 XXXXXXXXXXXXXXXXXRRQPLTIKWYYYLILGIIDVEANYIVVKSYQYTSLTSVMLLDC 120
RRQPLTIKWYYYLILGIIDVEANYIVVKSYQYTSLTSVMLLDC
Sbjct: 61 LLNYILLSLIYGGILIYRRQPLTIKWYYYLILGIIDVEANYIVVKSYQYTSLTSVMLLDC 120
Query: 121 WSIPCVIILTWIFLKTKYGLRKFIGVGVCVAGLILVVFSDVHASDRAKGPNPLKGDLLVI 180
WSIPCVIILTWIFLKTKYGLRKFIGVGVCVAGLILVVFSDVHASDRAKGPNPLKGDLLVI
Sbjct: 121 WSIPCVIILTWIFLKTKYGLRKFIGVGVCVAGLILVVFSDVHASDRAKGPNPLKGDLLVI 180
Query: 181 FGSMLYACSNVTEEYLVKKSNRIELMAMLGLFGAIISGIQISILERKELHSIKWNAGAVL 240
FGSMLYACSNVTEEYLVKKSNRIELMAMLGLFGAIISGIQISILERKELHSIKWNAGAVL
Sbjct: 181 FGSMLYACSNVTEEYLVKKSNRIELMAMLGLFGAIISGIQISILERKELHSIKWNAGAVL 240
Query: 241 PFLGFALAMFLFYSTVPTVLKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWIYFVAFA 300
PFLGFALAMFLFYSTVPTVLKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWIYFVAFA
Sbjct: 241 PFLGFALAMFLFYSTVPTVLKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWIYFVAFA 300
Query: 301 GTAAGLLIYSYKSSKEAEETAQVAGASDKQGKAGDEEAGMQNSS 344
GTAAGLLIYSYKSSKEAEETAQVAGASDKQGKAGDEEAGMQNSS
Sbjct: 301 GTAAGLLIYSYKSSKEAEETAQVAGASDKQGKAGDEEAGMQNSS 344
>Os09g0513200 Protein of unknown function DUF914, eukaryotic family protein
Length = 367
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/331 (74%), Positives = 276/331 (83%), Gaps = 10/331 (3%)
Query: 17 ARWMRRDVLLGLALGQFVSLLITSTGFSSSELARRGINAPTSQXXXXXXXXXXXXXXXXX 76
ARW+RR+V +GLALGQFVSLLITSTGFSSSELARRG+NAPTSQ
Sbjct: 6 ARWLRREVFVGLALGQFVSLLITSTGFSSSELARRGVNAPTSQSLLNYVLLALVYGGILI 65
Query: 77 XRRQPLTIKWYYYLILGIIDVEANYIVVKSYQYTSLTSVMLLDCWSIPCVIILTWIFLKT 136
RRQ LTIKWYY+LILGI+DVEANYIVVK+YQYTSLTSVML+DCW+IPCVI+LTW+FLKT
Sbjct: 66 YRRQHLTIKWYYFLILGIVDVEANYIVVKAYQYTSLTSVMLIDCWAIPCVILLTWVFLKT 125
Query: 137 KYGLRKFIGVGVCVAGLILVVFSDVHASDRAKGPNPLKGDLLVIFGSMLYACSNVTEEYL 196
KYGLRKFIGV +CVAG+ILVVFSDVHASDRAKGPNPLKGDL VI G+MLYA SNVTEEY
Sbjct: 126 KYGLRKFIGVVICVAGIILVVFSDVHASDRAKGPNPLKGDLFVIAGAMLYAVSNVTEEYF 185
Query: 197 VKKSNRIELMAMLGLFGAIISGIQISILERKELHSIKWNAGAVLPFLGFALAMFLFYSTV 256
VKKS+RIE+MAMLG+FGA+IS + L K + N +LPF+GFA+AMFLFYSTV
Sbjct: 186 VKKSSRIEVMAMLGVFGAVISE---AYLNDKNFG--QPNGMLILPFIGFAVAMFLFYSTV 240
Query: 257 PTVLKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWIYFVAFAGTAAGLLIYSYKSSKE 316
P +LKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDW+YFVAFAGTAAGL+IYSYK SK
Sbjct: 241 PIILKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWMYFVAFAGTAAGLVIYSYKGSKV 300
Query: 317 AEETAQVAGASDKQGK-----AGDEEAGMQN 342
AEETAQVAGA+D++ AGD+E N
Sbjct: 301 AEETAQVAGATDEEAATRVAGAGDDEPASTN 331
>Os05g0299500 Protein of unknown function DUF914, eukaryotic family protein
Length = 365
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/319 (64%), Positives = 250/319 (78%)
Query: 19 WMRRDVLLGLALGQFVSLLITSTGFSSSELARRGINAPTSQXXXXXXXXXXXXXXXXXXR 78
W R L+GL LGQ VSLL+T+TGF+SSEL+RRGIN PTSQ R
Sbjct: 10 WRSRKTLVGLGLGQLVSLLVTATGFASSELSRRGINVPTSQSLLNYVLLGVVYGSILLYR 69
Query: 79 RQPLTIKWYYYLILGIIDVEANYIVVKSYQYTSLTSVMLLDCWSIPCVIILTWIFLKTKY 138
R+ L +KWYYYL+L ++DVEANY+VVK+YQYTSLTSVMLLDCW+IP VI LTW+FLKT Y
Sbjct: 70 RKSLQMKWYYYLVLALVDVEANYLVVKAYQYTSLTSVMLLDCWAIPAVIFLTWMFLKTNY 129
Query: 139 GLRKFIGVGVCVAGLILVVFSDVHASDRAKGPNPLKGDLLVIFGSMLYACSNVTEEYLVK 198
RK+ GV +CV+GL+LVVFSDVHA DRA G +P+KGD+LVI G+ LYA SNV+EE+LVK
Sbjct: 130 RFRKYSGVAICVSGLVLVVFSDVHAGDRAGGTSPVKGDILVIAGATLYAISNVSEEFLVK 189
Query: 199 KSNRIELMAMLGLFGAIISGIQISILERKELHSIKWNAGAVLPFLGFALAMFLFYSTVPT 258
+R+ELM MLGLFGAIIS QISI ER E+ SI+W+ GAV+PF+GFA+AMF+FYS VP
Sbjct: 190 VGDRVELMGMLGLFGAIISACQISIFERNEIKSIQWSVGAVVPFIGFAVAMFMFYSLVPI 249
Query: 259 VLKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWIYFVAFAGTAAGLLIYSYKSSKEAE 318
+LKI G+TMLNLSLLTSDMWA+LIR+FAYHEKVDW+Y+VAF A GL+IYS S+ +
Sbjct: 250 LLKISGSTMLNLSLLTSDMWAILIRLFAYHEKVDWMYYVAFGAVAIGLVIYSGDSNSDDG 309
Query: 319 ETAQVAGASDKQGKAGDEE 337
QVA A+D +GK DEE
Sbjct: 310 RRGQVAEATDVEGKLPDEE 328
>Os05g0444300 Protein of unknown function DUF914, eukaryotic family protein
Length = 354
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/303 (46%), Positives = 196/303 (64%), Gaps = 6/303 (1%)
Query: 41 TGFSSSELARRGINAPTSQXXXXXXXXXXXXXXXXXXRRQPLTIKWYYYLILGIIDVEAN 100
+ F+SS +A G++AP +Q RRQ L I WY+YL L IDV+ N
Sbjct: 33 SSFTSSLIATLGVDAPLTQSFFAYLLLTLVYVPILLKRRQKLQIPWYWYLALAFIDVQGN 92
Query: 101 YIVVKSYQYTSLTSVMLLDCWSIPCVIILTWIFLKTKYGLRKFIGVGVCVAGLILVVFSD 160
Y+VVK+YQY+ +TSV LLDCW++ V+ILTW L T+Y + +G G CVAGL LV+ SD
Sbjct: 93 YLVVKAYQYSYITSVTLLDCWTVVWVVILTWYALGTRYSFWQIVGAGTCVAGLALVLLSD 152
Query: 161 VHASDRAKGPN--PLKGDLLVIFGSMLYACSNVTEEYLVKKSNRIELMAMLGLFGAIISG 218
++D A+ P+ PL GD LVI G++ +A SNV EEY VKK +R+E +AM LFG ++S
Sbjct: 153 SKSAD-AQDPSKIPLLGDALVIAGTIFFAFSNVGEEYCVKKKDRVEFVAMFALFGLLVSI 211
Query: 219 IQISILERKELHSIKWNAGAVLPFLGFALAMFLFYSTVPTVLKICGATMLNLSLLTSDMW 278
IQI I E+K L +I W+ + F GFA+A+F+FYS P VLK+ G+T+ NLSLLTSDMW
Sbjct: 212 IQILIFEKKNLVAIAWSPTMLCLFAGFAVALFMFYSITPFVLKMSGSTLFNLSLLTSDMW 271
Query: 279 AVLIRIFAYHEKVDWIYFVAFAGTAAGLLIYS---YKSSKEAEETAQVAGASDKQGKAGD 335
AV IR+ YH++++W+Y++AFA A GL+IYS + S TA A+ Q G+
Sbjct: 272 AVAIRVLFYHQQINWLYYIAFAVVAIGLIIYSLNDHSSDSGTRTTANTEAAAQYQQLPGE 331
Query: 336 EEA 338
+
Sbjct: 332 NNS 334
>Os05g0299650
Length = 256
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 91/116 (78%)
Query: 222 SILERKELHSIKWNAGAVLPFLGFALAMFLFYSTVPTVLKICGATMLNLSLLTSDMWAVL 281
SI E E SI+W+ GAV+PF+GFA+AMF+FYS VP +LKI G+TMLNLSLL SDMWA+L
Sbjct: 124 SIFEHNEKKSIQWSVGAVVPFIGFAVAMFMFYSLVPILLKISGSTMLNLSLLASDMWAIL 183
Query: 282 IRIFAYHEKVDWIYFVAFAGTAAGLLIYSYKSSKEAEETAQVAGASDKQGKAGDEE 337
IR+FAYHEKVDW+Y+VAF A GL+IYS S+ + + QVA A+D +GK DEE
Sbjct: 184 IRVFAYHEKVDWMYYVAFGVVAIGLVIYSGDSNSDDGRSGQVAEATDVEGKLPDEE 239
>Os05g0444400
Length = 182
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
Query: 51 RGINAPTSQXXXXXXXXXXXXXXXXXXRRQPLTIKWYYYLILGIIDVEANYIVVKSYQYT 110
+G +AP +Q R++ + WY+YL L IDV+ N + +K+Y Y+
Sbjct: 3 KGADAPFTQSFLSYLLLALVYGPVLLHRQRKFLMPWYWYLALAFIDVQGNCLAIKAYHYS 62
Query: 111 SLTSVMLLDCWSIPCVIILTWIFLKTKYGLRKFIGVGVCVAGLILVVFSDVHASD-RAKG 169
+TSV LL+CW+I V+ILT L T+Y L +F+G G C+ GL LV+ SD + SD + +
Sbjct: 63 YITSVNLLNCWTITWVMILTRFALGTRYSLWQFVGAGTCMTGLALVLLSDSNYSDVQDES 122
Query: 170 PNPLKGDLLVIFGSMLYACSNVTEEYLVKKSNRIELMAMLGLFGAIISGIQI 221
PL GD L+I + +A SNV EEY VK +RIE +AMLG+FG +++GIQ+
Sbjct: 123 KRPLLGDALIIVATFCFAFSNVGEEYCVKNKDRIEFVAMLGIFGMLVTGIQL 174
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.138 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,345,832
Number of extensions: 369395
Number of successful extensions: 1205
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1197
Number of HSP's successfully gapped: 6
Length of query: 344
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 242
Effective length of database: 11,709,973
Effective search space: 2833813466
Effective search space used: 2833813466
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 156 (64.7 bits)