Os09g0513200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF914, eukaryotic family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0513200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF914, eukaryotic family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.38 | 0.389 | 9.38 | -0.17 | 1.46 | -0.498 | 0.677 | 0.183 | -0.513 | 22 | 21.3 | 858 | -- | -- |
| 68.46 | 0.385 | 9.38 | -0.207 | 1.46 | -0.514 | 0.737 | -- | -0.521 | 22 | 21.4 | 869 | -- | -- |
| 69.86 | 0.389 | 9.37 | -0.14 | 1.46 | -0.476 | -- | 0.483 | -0.505 | 21.9 | 21.4 | 775 | -- | -- |
| 70.57 | 0.391 | 9.38 | -0.238 | 1.45 | -0.513 | -- | -- | -0.521 | 21.9 | 21.3 | 860 | -- | -- |
| 172.97 | 0.616 | 9.35 | -0.359 | -- | -0.515 | -- | -0.368 | -0.535 | -- | 22.3 | 4452 | -- | -- |
| 77.08 | 0.412 | 9.41 | -0.403 | 1.37 | -- | 0.76 | -- | -0.663 | 21.9 | -- | -- | -- | -- |
| 79.32 | 0.417 | 9.41 | -0.432 | 1.37 | -- | -- | -- | -0.664 | 21.9 | -- | -- | -- | -- |
| 173.81 | 0.617 | 9.34 | -0.255 | -- | -0.514 | -- | -- | -0.509 | -- | 22.3 | 4452 | -- | -- |
| 71.97 | 0.395 | 9.38 | -- | 1.45 | -0.567 | -- | -- | -0.512 | 22 | 21.1 | 863 | -- | -- |
| 191.26 | 0.646 | 9.38 | -0.417 | -- | -- | -- | -- | -0.664 | -- | -- | -- | -- | -- |
| 84.23 | 0.429 | 9.4 | -- | 1.37 | -- | -- | -- | -0.616 | 21.9 | -- | -- | -- | -- |
| 175.47 | 0.619 | 9.33 | -- | -- | -0.545 | -- | -- | -0.472 | -- | 22.3 | 4452 | -- | -- |
| 195.84 | 0.653 | 9.37 | -- | -- | -- | -- | -- | -0.618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.20 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 11 |
| 3 | 63.53 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 10 |
| 38 | 65.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 43 | 65.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 10 |
| 48 | 65.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 66 | 66.06 | temperature | 20 | 270 | > th | dose dependent | sin | 6 | NA |
| 67 | 66.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 13 |
| 98 | 66.56 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 103 | 66.63 | temperature | 25 | 10 | < th | dose independent | sin | 2 | NA |
| 104 | 66.63 | temperature | 10 | 10 | > th | dose dependent | sin | 3 | NA |
| 107 | 66.65 | temperature | 20 | 10 | > th | dose dependent | sin | 4 | NA |
| 132 | 66.86 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 141 | 66.92 | temperature | 25 | 10 | > th | dose independent | sin | 3 | NA |
| 155 | 67.00 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 178 | 67.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 185 | 67.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 19 |
| 222 | 67.33 | temperature | 25 | 10 | < th | dose independent | rect. | 3 | 10 |
| 224 | 67.34 | temperature | 25 | 10 | < th | dose independent | rect. | 3 | 13 |
| 246 | 67.42 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 273 | 67.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 12 |
| 314 | 67.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 399 | 67.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 10 |
| 410 | 67.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 441 | 67.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 450 | 67.99 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 453 | 68.00 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 15 |
| 474 | 68.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 12 |
| 595 | 68.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 683 | 68.37 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 4 |
| 686 | 68.37 | temperature | 25 | 10 | > th | dose independent | rect. | 4 | 18 |
| 709 | 68.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 756 | 68.48 | temperature | 25 | 10 | < th | dose independent | rect. | 6 | 6 |
| 785 | 68.53 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 1 |
| 807 | 68.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 809 | 68.56 | temperature | 25 | 10 | < th | dose independent | rect. | 6 | 10 |
| 817 | 68.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 819 | 68.57 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 10 |
| 851 | 68.62 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 5 |
| 866 | 68.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 904 | 68.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 17 |
| 974 | 68.79 | temperature | 30 | 10 | < th | dose independent | rect. | 24 | 19 |
| 993 | 68.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 22 |