Os05g0299500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF914, eukaryotic family protein.
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Os05g0299500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF914, eukaryotic family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.09 | 0.465 | 9.86 | 0.0433 | 0.452 | -1.91 | -0.0828 | -4.15 | 0.445 | 1.98 | 1.2 | 5688 | -- | -- |
| 117.48 | 0.505 | 9.84 | 0.745 | 0.437 | -1.24 | -0.496 | -- | 0.461 | 2.05 | 1.833 | 5636 | -- | -- |
| 97.47 | 0.46 | 9.86 | 0.13 | 0.495 | -2 | -- | -4.17 | 0.452 | 1.79 | 1.06 | 5652 | -- | -- |
| 105.23 | 0.478 | 9.82 | 0.768 | 0.415 | -1.33 | -- | -- | 0.524 | 2.1 | 1.678 | 12834 | -- | -- |
| 95.89 | 0.456 | 9.85 | 0.262 | -- | -2.16 | -- | -4.04 | 0.532 | -- | 1.17 | 14959 | -- | -- |
| 155.65 | 0.585 | 9.84 | 0.544 | 0.287 | -- | -0.427 | -- | 0.279 | 2.81 | -- | -- | -- | -- |
| 156.04 | 0.585 | 9.84 | 0.554 | 0.299 | -- | -- | -- | 0.281 | 3.65 | -- | -- | -- | -- |
| 101.86 | 0.47 | 9.78 | 1.02 | -- | -1.63 | -- | -- | 0.81 | -- | 1.982 | 14775 | -- | -- |
| 121.3 | 0.513 | 9.8 | -- | 0.387 | -1.28 | -- | -- | 0.55 | 2.06 | 2.31 | 12746 | -- | -- |
| 161 | 0.593 | 9.84 | 0.566 | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
| 164.12 | 0.599 | 9.85 | -- | 0.31 | -- | -- | -- | 0.22 | 3.63 | -- | -- | -- | -- |
| 123.21 | 0.517 | 9.78 | -- | -- | -1.37 | -- | -- | 0.616 | -- | 2.31 | 13422 | -- | -- |
| 169.45 | 0.608 | 9.86 | -- | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 2 | 85.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 4 | 85.99 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 7 | 86.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 8 | 86.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 9 | 86.51 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 15 | 86.81 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 21 | 86.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 28 | 87.19 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 33 | 87.26 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 9 |
| 35 | 87.28 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 55 | 87.47 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 9 |
| 60 | 87.54 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 6 |
| 65 | 87.62 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 68 | 87.66 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 90 | 87.91 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 92 | 87.94 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 98 | 87.97 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 99 | 88.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 101 | 88.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 104 | 88.07 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 105 | 88.09 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 108 | 88.12 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 15 |
| 116 | 88.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 132 | 88.32 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 138 | 88.37 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 148 | 88.41 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 164 | 88.50 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 174 | 88.54 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 182 | 88.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 204 | 88.69 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 209 | 88.71 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 260 | 88.91 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 16 |
| 262 | 88.92 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 264 | 88.93 | humidity | 90.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 274 | 88.96 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 286 | 88.98 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 287 | 88.99 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 291 | 88.99 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 327 | 89.06 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 345 | 89.10 | temperature | 20.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 392 | 89.16 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 21 |
| 403 | 89.18 | temperature | 20.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 517 | 89.28 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 579 | 89.34 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 604 | 89.37 | temperature | 20.0 | 43200 | > th | dose independent | no | NA | NA |
| 613 | 89.37 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 614 | 89.37 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 615 | 89.37 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 620 | 89.38 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 633 | 89.38 | temperature | 25.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 683 | 89.41 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 716 | 89.44 | temperature | 20.0 | 43200 | < th | dose independent | no | NA | NA |
| 725 | 89.44 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 726 | 89.44 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 745 | 89.45 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 788 | 89.47 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 20 | NA |
| 946 | 89.59 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |