BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0508700 Os08g0508700|AK072462
(619 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0508700 Similar to EIL3 1217 0.0
Os09g0490200 Similar to EIL3 573 e-163
Os03g0324300 Similar to EIL3 322 4e-88
Os07g0685700 Ethylene insensitive 3 family protein 318 5e-87
Os04g0456900 243 2e-64
Os02g0689132 Ethylene insensitive 3 family protein 100 4e-21
Os07g0272500 80 5e-15
>Os08g0508700 Similar to EIL3
Length = 619
Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/619 (94%), Positives = 587/619 (94%)
Query: 1 MGNPSILTEDLGDTSDFEVDGVENLTENDVSDEEIDAEELARRMWKDKIKLKRIXXXXXX 60
MGNPSILTEDLGDTSDFEVDGVENLTENDVSDEEIDAEELARRMWKDKIKLKRI
Sbjct: 1 MGNPSILTEDLGDTSDFEVDGVENLTENDVSDEEIDAEELARRMWKDKIKLKRIKERQQK 60
Query: 61 XXXXXXXXXXXXTKKMSEQALRKKTARVQDGILRYMLKLMEVCNARGFVYGIIPHKGKPV 120
TKKMSEQALRKKTARVQDGILRYMLKLMEVCNARGFVYGIIPHKGKPV
Sbjct: 61 LALQQAALEESKTKKMSEQALRKKTARVQDGILRYMLKLMEVCNARGFVYGIIPHKGKPV 120
Query: 121 SGASDNIRAWWKEKVRFDVNGPVAIAKYEVKNSMLVDAKRRGVLNQHSLMDLQDATLGSL 180
SGASDNIRAWWKEKVRFDVNGPVAIAKYEVKNSMLVDAKRRGVLNQHSLMDLQDATLGSL
Sbjct: 121 SGASDNIRAWWKEKVRFDVNGPVAIAKYEVKNSMLVDAKRRGVLNQHSLMDLQDATLGSL 180
Query: 181 LSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDWWISLGLPMGISPPYRKPHDLKKVWKVG 240
LSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDWWISLGLPMGISPPYRKPHDLKKVWKVG
Sbjct: 181 LSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDWWISLGLPMGISPPYRKPHDLKKVWKVG 240
Query: 241 VLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTAKESLIWLGVLRREEIYFRSSDNVGSQIT 300
VLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTAKESLIWLGVLRREEIYFRSSDNVGSQIT
Sbjct: 241 VLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTAKESLIWLGVLRREEIYFRSSDNVGSQIT 300
Query: 301 HRSSREGKXXXXXXXXXXXXXXHLEEPPRSSSSKDNVGRRQPTAQIREEHTSSRHNRGRH 360
HRSSREGK HLEEPPRSSSSKDNVGRRQPTAQIREEHTSSRHNRGRH
Sbjct: 301 HRSSREGKSDDIYSSSDEYDVDHLEEPPRSSSSKDNVGRRQPTAQIREEHTSSRHNRGRH 360
Query: 361 DQQPNQVLPSNEGTNESRKRKRPSGHLLTAESEVEVTQKDDNQLAIVSNALPNMSRINQT 420
DQQPNQVLPSNEGTNESRKRKRPSGHLLTAESEVEVTQKDDNQLAIVSNALPNMSRINQT
Sbjct: 361 DQQPNQVLPSNEGTNESRKRKRPSGHLLTAESEVEVTQKDDNQLAIVSNALPNMSRINQT 420
Query: 421 EMMGMANQMTSLSHVNTTETLQHQYVQGNFVSSPAAVVNNYNSNQITNVNPSRIYMGYQP 480
EMMGMANQMTSLSHVNTTETLQHQYVQGNFVSSPAAVVNNYNSNQITNVNPSRIYMGYQP
Sbjct: 421 EMMGMANQMTSLSHVNTTETLQHQYVQGNFVSSPAAVVNNYNSNQITNVNPSRIYMGYQP 480
Query: 481 LACQNNGHTNPWSEDTFQVDVGPPPIGFTTNSSSGGNHSFPMKQSLPKSIDDHVPITETG 540
LACQNNGHTNPWSEDTFQVDVGPPPIGFTTNSSSGGNHSFPMKQSLPKSIDDHVPITETG
Sbjct: 481 LACQNNGHTNPWSEDTFQVDVGPPPIGFTTNSSSGGNHSFPMKQSLPKSIDDHVPITETG 540
Query: 541 VLADSSSYGYHITATGSRNSTSVAGHGNQLMGDPFDSGTADKFNGNSFDGLPFDFIGSSP 600
VLADSSSYGYHITATGSRNSTSVAGHGNQLMGDPFDSGTADKFNGNSFDGLPFDFIGSSP
Sbjct: 541 VLADSSSYGYHITATGSRNSTSVAGHGNQLMGDPFDSGTADKFNGNSFDGLPFDFIGSSP 600
Query: 601 IPDIGVLLDDDDIMPYLGT 619
IPDIGVLLDDDDIMPYLGT
Sbjct: 601 IPDIGVLLDDDDIMPYLGT 619
>Os09g0490200 Similar to EIL3
Length = 565
Score = 573 bits (1477), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/570 (54%), Positives = 380/570 (66%), Gaps = 18/570 (3%)
Query: 1 MGNPSILTEDLGDTSDFEVDGVENLTENDVSDEEIDAEELARRMWKDKIKLKRIXXXXXX 60
M + +I+ +LGD+SDFEV+G++NLTENDVSDEEI+AE+LARRMWKD+IKL+RI
Sbjct: 1 MDHLAIIATELGDSSDFEVEGIQNLTENDVSDEEIEAEDLARRMWKDRIKLRRIKERQDR 60
Query: 61 XXXXXXXXXXXXTK--KMSEQALRKKTARVQDGILRYMLKLMEVCNARGFVYGIIPHKGK 118
+K +S+QA+RKK +R QDGIL+YMLKLMEVCNARGFVYGIIP KGK
Sbjct: 61 LALALQQAELDKSKGKPISDQAMRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPDKGK 120
Query: 119 PVSGASDNIRAWWKEKVRFDVNGPVAIAKYEVKNSMLVDAKRRGVLNQHSLMDLQDATLG 178
PVSGASDNIRAWWKEKV+FD NGP AIAKYE +N DA G+ +QHSLMDLQDATLG
Sbjct: 121 PVSGASDNIRAWWKEKVKFDKNGPAAIAKYESENLASADAPSSGIKSQHSLMDLQDATLG 180
Query: 179 SLLSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDWWISLGLPMGISPPYRKPHDLKKVWK 238
SLLSSLMQHC P QRKYPL++G PPPWWPSGNEDWWI+LGLP G PPY+KPHDLKKVWK
Sbjct: 181 SLLSSLMQHCDPPQRKYPLERGTPPPWWPSGNEDWWIALGLPRGQIPPYKKPHDLKKVWK 240
Query: 239 VGVLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTAKESLIWLGVLRREEIYFRSSDNVGSQ 298
VGVLTGVIKHM+PNFDKIRN VRKSKCLQDKMTAKESLIWLGVL+REE S DN S+
Sbjct: 241 VGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVLSIDNGMSE 300
Query: 299 ITHRSSREGKXXXXXXXXXXXXXXHLEEPPRSSSSKDNVGRRQPTAQIREEHTSSRHNRG 358
+TH + E + EE P S+SS D+ P AQ+ EEH +R R
Sbjct: 301 VTHHGALEYRNGDTHSSSNEYDVDGFEEAPLSTSSGDDEQDLSPAAQLSEEHAPTRRERA 360
Query: 359 RHDQQPNQVLPSNEGTNESRKRKRPSGHLLTAESEVEVTQKDDNQLAIVSNALPNMSRIN 418
+ ++PNQV+P GT E KRKRP + E EV Q+ D+ N +P+M+R++
Sbjct: 361 KV-KRPNQVVPKKAGTKEPPKRKRPRHSVTVIEQEV---QRADDASEHSRNMIPDMNRLD 416
Query: 419 QTEMMGMANQMTSLS-HVNTTETLQHQYVQGNFVSSPAAVVNNYNSNQITNVNPSRIYMG 477
Q E+ GMANQ+TS + NT+E LQH+ PA N+Y + Q T P I M
Sbjct: 417 QVEIQGMANQITSFNEEANTSEALQHRGNTQELAHLPAD-FNHYGNAQATIATPVSICMR 475
Query: 478 YQPLACQNNGHTNPWSEDTFQVDVGPPPIGFTTNSSSGGNHSFPMKQSLPKSIDDH--VP 535
Q + +++ ++ P + + F D GF SS + P KQ LP SI +H VP
Sbjct: 476 GQAVPYESSDNSRPKTGNIFPQDSDS---GFNNMPSS--YQTIPPKQPLPLSIMEHHVVP 530
Query: 536 ITETGVLADSSSYGYHITATGSRNSTSVAG 565
+ AD+S Y I +G NSTSV G
Sbjct: 531 LG-IRTPADNSPYSDQIIGSG--NSTSVPG 557
>Os03g0324300 Similar to EIL3
Length = 528
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 187/256 (73%), Gaps = 7/256 (2%)
Query: 42 RRMWKDKIKLKRIXXXXXXXXXXXXXXXX---XXTKKMSEQALRKKTARVQDGILRYMLK 98
RRMW+D++KLKR+ ++ EQA RKK +R QDGIL+YMLK
Sbjct: 83 RRMWRDRMKLKRLKELQLSRGKDPAGGVVGDPSKPRQSQEQARRKKMSRAQDGILKYMLK 142
Query: 99 LMEVCNARGFVYGIIPHKGKPVSGASDNIRAWWKEKVRFDVNGPVAIAKYEVKNSM--LV 156
+MEVC A+GFVYGIIP KGKPVSGASDN+R WWKEKVRFD NGP AIAKY+ N++
Sbjct: 143 MMEVCRAQGFVYGIIPEKGKPVSGASDNLRGWWKEKVRFDRNGPAAIAKYQADNAVPGFE 202
Query: 157 DAKRRGVLNQHSLMDLQDATLGSLLSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDWWIS 216
G + HSL +LQD TLGSLLS+LMQHC P QR+YPL+KGVPPPWWP+G+E+WW
Sbjct: 203 SELASGTGSPHSLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPTGDEEWWPE 262
Query: 217 LGLPMGIS-PPYRKPHDLKKVWKVGVLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTAKES 275
LG+P PPY+KPHDLKK WKV VLT VIKHM+P+ +KIR VR+SKCLQDKMTAKE
Sbjct: 263 LGIPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEI 322
Query: 276 LIWLGVLRR-EEIYFR 290
WL V+++ EE+Y +
Sbjct: 323 STWLAVVKQEEELYLK 338
>Os07g0685700 Ethylene insensitive 3 family protein
Length = 593
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 153/259 (59%), Positives = 187/259 (72%), Gaps = 10/259 (3%)
Query: 42 RRMWKDKIKLKRIXXXXXXXXXXXXXXXXXXT-----KKMSEQALRKKTARVQDGILRYM 96
RRMW+D+++ KR+ ++ EQA RKK +R QDGIL+YM
Sbjct: 85 RRMWRDRVRHKRLKELQQSRAGRESRAGDAGGGGRQQRQSQEQARRKKMSRAQDGILKYM 144
Query: 97 LKLMEVCNARGFVYGIIPHKGKPVSGASDNIRAWWKEKVRFDVNGPVAIAKYEVKNSM-- 154
LK+MEVCNA+GFVYGIIP KGKPVSGASDN+R+WWKEKVRFD NGP AIAKY+ N++
Sbjct: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNAVPG 204
Query: 155 -LVDAKRRGVLNQHSLMDLQDATLGSLLSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDW 213
DA HSL +LQD TLGSLLS+LMQHC P QR++PL+KGVPPPWWP G+E W
Sbjct: 205 CDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
Query: 214 WISLGLPMGIS-PPYRKPHDLKKVWKVGVLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTA 272
W G+P + PPY+KPHDLKK WKV VLT VIKHM+P+ DK+R VR+SKCLQDKMTA
Sbjct: 265 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTA 324
Query: 273 KESLIWLGVLRREE-IYFR 290
KE + WL VL++EE +Y +
Sbjct: 325 KEIVTWLAVLKQEEDLYLK 343
>Os04g0456900
Length = 445
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/280 (43%), Positives = 169/280 (60%), Gaps = 14/280 (5%)
Query: 23 ENLTENDVSDEEIDAEELARRMWKDKIKLKRIXXXXXXXXXXXXXXXXXXTKKMSEQAL- 81
E ++++ E I+ +L +RMWKD++ L ++ ++
Sbjct: 24 EFFSDSESGSESIEIADLKKRMWKDQMLLMKLEGRSGHEGALAAQDHRVVRREEEAAEEE 83
Query: 82 -------RKKTARVQDGILRYMLKLMEVCNARGFVYGIIPHKGKPVSGASDNIRAWWKEK 134
RK R QDG+LR+MLK+ME CNARGFVYGI+ G PVSG+SD++R WWK+
Sbjct: 84 PPEARYRRKAMLRAQDGVLRHMLKMMEACNARGFVYGIVDESGVPVSGSSDSLRGWWKDD 143
Query: 135 VRFDVNGPVAIAKYEVKNSMLVDAKRRGVLNQHSLMDLQDATLGSLLSSLMQHCSPQQRK 194
V FD GP A++ + S A L H L+D+QD+TLGSLLS+L+QHC P QR
Sbjct: 144 VAFDRAGPTALSGRGGRGSPRSPAAAASFL--HGLLDIQDSTLGSLLSALIQHCEPPQRS 201
Query: 195 YPLDKGVPPPWWPSGNEDWWISLGLPMGIS--PPYRKPHDLKKVWKVGVL--TGVIKHMA 250
+PLD+G+PPPWWP+G E WW G PPYRKPHDLKK WK+ +L + VIKH++
Sbjct: 202 FPLDRGLPPPWWPTGGEAWWGLQGEAQASQGPPPYRKPHDLKKAWKISLLRASAVIKHLS 261
Query: 251 PNFDKIRNCVRKSKCLQDKMTAKESLIWLGVLRREEIYFR 290
P FD+IR V +SK LQ KM+A+++ W V+ +EE R
Sbjct: 262 PRFDQIRKLVWQSKRLQHKMSARDADTWSRVITQEEALSR 301
>Os02g0689132 Ethylene insensitive 3 family protein
Length = 84
Score = 100 bits (248), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 96 MLKLMEVCNARGFVYGIIPHKGKPVSGASDNIRAWWKEKVRFDVNGPVAIAK 147
MLK+MEVCNA+GFVYGIIP KGKPVS ASDN+R+WWKEKVRFD NGP AI K
Sbjct: 1 MLKMMEVCNAQGFVYGIIPEKGKPVSSASDNLRSWWKEKVRFDRNGPAAIVK 52
>Os07g0272500
Length = 465
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 172 LQDATLGSLLSSLMQHCSPQQRKYPLDKGVP--PPWWPSGNEDWWISLGLPMGISPPYRK 229
L D L ++ LM+ C P Q YPL P PPWWP+G E WW LG + PPYR
Sbjct: 100 LADHVLERMVKVLMRKCHPPQALYPLIGKSPLRPPWWPTGREQWWPELGA-GAVVPPYRP 158
Query: 230 PHDLKKVWKVGVLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTAKESLIW-LGVLRREEIY 288
L K K + ++K++ P+F+++ VR + + ++T E+ W GV E Y
Sbjct: 159 APLLSKAEKEVAVVAMVKNLVPDFERLFMAVRMAPSVTSRITDAEARAWDDGVAGERETY 218
Query: 289 F 289
Sbjct: 219 M 219
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,211,839
Number of extensions: 993666
Number of successful extensions: 2044
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2027
Number of HSP's successfully gapped: 8
Length of query: 619
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 512
Effective length of database: 11,448,903
Effective search space: 5861838336
Effective search space used: 5861838336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 159 (65.9 bits)