Os07g0685700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ethylene insensitive 3 family protein.
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Os07g0685700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ethylene insensitive 3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.68 | 0.321 | 12.4 | 0.391 | 1.16 | 1.17 | -0.433 | -0.29 | 0.428 | 5.63 | 24.36 | 189 | -- | -- |
| 46.88 | 0.319 | 12.4 | 0.389 | 1.2 | 1.13 | -0.558 | -- | 0.424 | 5.49 | 25.87 | 179 | -- | -- |
| 47.06 | 0.319 | 12.4 | 0.401 | 1.17 | 1.19 | -- | -0.341 | 0.43 | 5.74 | 24.37 | 179 | -- | -- |
| 47.61 | 0.321 | 12.4 | 0.385 | 1.19 | 1.16 | -- | -- | 0.428 | 5.69 | 25.03 | 174 | -- | -- |
| 59.05 | 0.358 | 12.4 | 0.412 | -- | 1.91 | -- | -0.899 | 0.504 | -- | 11.6 | 445 | -- | -- |
| 66.53 | 0.382 | 12.4 | 0.305 | 1.92 | -- | -0.594 | -- | 0.352 | 3.73 | -- | -- | -- | -- |
| 67.58 | 0.385 | 12.4 | 0.314 | 1.92 | -- | -- | -- | 0.355 | 3.73 | -- | -- | -- | -- |
| 57.95 | 0.355 | 12.4 | 0.344 | -- | 1.96 | -- | -- | 0.457 | -- | 7.36 | 482 | -- | -- |
| 51.54 | 0.334 | 12.4 | -- | 1.22 | 1.12 | -- | -- | 0.381 | 5.54 | 25.59 | 171 | -- | -- |
| 270.54 | 0.769 | 12.4 | 0.394 | -- | -- | -- | -- | 0.406 | -- | -- | -- | -- | -- |
| 70.18 | 0.392 | 12.4 | -- | 1.92 | -- | -- | -- | 0.32 | 3.73 | -- | -- | -- | -- |
| 60.82 | 0.363 | 12.4 | -- | -- | 1.97 | -- | -- | 0.424 | -- | 8.86 | 479 | -- | -- |
| 274.63 | 0.774 | 12.4 | -- | -- | -- | -- | -- | 0.363 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.70 | radiation | 30 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 2 | 42.76 | radiation | 20 | 270 | < th | dose dependent | rect. | 10 | 10 |
| 3 | 42.79 | radiation | 20 | 270 | < th | dose independent | rect. | 2 | 18 |
| 6 | 42.86 | radiation | 10 | 90 | < th | dose dependent | sin | 21 | NA |
| 44 | 44.05 | radiation | 10 | 270 | < th | dose dependent | rect. | 13 | 6 |
| 51 | 44.16 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 4 |
| 53 | 44.18 | radiation | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 56 | 44.30 | radiation | 20 | 270 | < th | dose independent | rect. | 10 | 10 |
| 66 | 44.47 | radiation | 10 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 77 | 44.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 4 |
| 115 | 45.09 | radiation | 1 | 90 | < th | dose independent | sin | 22 | NA |
| 128 | 45.17 | radiation | 1 | 30 | > th | dose independent | sin | 21 | NA |
| 147 | 45.39 | radiation | 20 | 270 | < th | dose independent | rect. | 13 | 7 |
| 158 | 45.45 | radiation | 20 | 270 | < th | dose dependent | sin | 0 | NA |
| 175 | 45.61 | humidity | 70 | 90 | > th | dose independent | rect. | 4 | 16 |
| 188 | 45.70 | humidity | 50 | 90 | > th | dose dependent | rect. | 17 | 3 |
| 189 | 45.74 | radiation | 20 | 270 | < th | dose independent | rect. | 15 | 5 |
| 266 | 46.27 | humidity | 50 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 277 | 46.33 | radiation | 30 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 301 | 46.59 | humidity | 70 | 270 | > th | dose independent | rect. | 1 | 19 |
| 309 | 46.68 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 5 |
| 331 | 46.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 340 | 46.92 | radiation | 30 | 270 | < th | dose dependent | rect. | 13 | 21 |
| 352 | 46.98 | humidity | 60 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 379 | 47.09 | humidity | 50 | 270 | > th | dose independent | rect. | 15 | 5 |
| 398 | 47.20 | humidity | 70 | 90 | > th | dose independent | rect. | 17 | 3 |
| 404 | 47.22 | temperature | 30 | 90 | < th | dose independent | rect. | 17 | 3 |
| 409 | 47.25 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 5 |
| 476 | 47.48 | radiation | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 486 | 47.56 | temperature | 10 | 90 | > th | dose dependent | rect. | 20 | 22 |
| 553 | 47.86 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 18 |
| 575 | 47.93 | humidity | 50 | 270 | > th | dose independent | rect. | 16 | 3 |
| 669 | 48.27 | radiation | 20 | 270 | < th | dose independent | rect. | 13 | 21 |
| 723 | 48.40 | humidity | 70 | 90 | > th | dose independent | rect. | 11 | 9 |
| 729 | 48.41 | humidity | 60 | 10 | > th | dose dependent | rect. | 6 | 15 |
| 742 | 48.45 | radiation | 20 | 270 | < th | dose independent | rect. | 15 | 18 |
| 789 | 48.58 | radiation | 10 | 270 | > th | dose independent | rect. | 8 | 8 |
| 801 | 48.62 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 22 |
| 813 | 48.64 | humidity | 50 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 816 | 48.64 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 827 | 48.67 | wind | 7 | 270 | < th | dose independent | rect. | 20 | 20 |
| 850 | 48.72 | humidity | 60 | 10 | > th | dose dependent | rect. | 10 | 11 |
| 872 | 48.77 | radiation | 10 | 270 | > th | dose independent | rect. | 16 | 23 |
| 918 | 48.85 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 23 |
| 930 | 48.86 | radiation | 40 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 949 | 48.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 975 | 48.96 | atmosphere | 995 | 270 | > th | dose independent | rect. | 16 | 4 |
| 1000 | 49.00 | humidity | 60 | 90 | > th | dose dependent | rect. | 11 | 9 |