BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0685700 Os07g0685700|AK060806
(593 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27050.1 | chr2:11546314-11548068 FORWARD LENGTH=585 409 e-114
AT3G20770.1 | chr3:7260702-7262588 REVERSE LENGTH=629 400 e-111
AT1G73730.1 | chr1:27730434-27732363 REVERSE LENGTH=568 323 2e-88
AT5G65100.1 | chr5:26006835-26008508 REVERSE LENGTH=558 298 7e-81
AT5G10120.1 | chr5:3169732-3171147 FORWARD LENGTH=472 293 3e-79
AT5G21120.1 | chr5:7182629-7184185 FORWARD LENGTH=519 283 1e-76
>AT2G27050.1 | chr2:11546314-11548068 FORWARD LENGTH=585
Length = 584
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/453 (49%), Positives = 274/453 (60%), Gaps = 33/453 (7%)
Query: 85 RRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKYM 144
+RMWRD++R KRLKE Q KKMSRAQDGILKYM
Sbjct: 53 KRMWRDKMRLKRLKEQQ--------SKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYM 104
Query: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXXX 204
LKMMEVC AQGFVYGIIPEKGKPV+GASDNLR WWK+KVRFDRNGPAAIAKYQ++N
Sbjct: 105 LKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISG 164
Query: 205 XXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
H+L ELQDTTLGSLLSALMQHCDPPQRRFPLEKGV PPWWP G+E W
Sbjct: 165 GSNDCNSLVGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEEW 224
Query: 265 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTA 324
WP+ G+P E GPPPYKKPHDLKKAWKV VLTAVIKHMSPD+ K+R+LVRQSKCLQDKMTA
Sbjct: 225 WPQLGLPNEQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTA 284
Query: 325 KEIVTWLAVLKQEE----DLYLKXX-XXXXXXXXXXXXXXXXVSGEYDVEGVDGDEAGNN 379
KE TWLA++ QEE +LY + EYDVEG + ++ G
Sbjct: 285 KESATWLAIINQEEVVARELYPESCPPLSSSSSLGSGSLLINDCSEYDVEGFEKEQHG-F 343
Query: 380 NLQKAQNDATAFMDLTTTMDAALSNNKFLIMPLMKEEA--IDVDFIQKRSEPELM--LSS 435
++++ + + L A+ K P+ +E A ++++F +KR + M +
Sbjct: 344 DVEERKPEIVMMHPL-----ASFGVAKMQHFPIKEEVATTVNLEFTRKRKQNNDMNVMVM 398
Query: 436 DSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHNXXXXXXESKP---------PP 486
D A YTC N QCPHS LGF DR+ R+ HQ C + + P
Sbjct: 399 DRSAG-YTCENGQCPHSKMNLGFQDRSSRDNHQMVCPYRDNRLAYGASKFHMGGMKLVVP 457
Query: 487 PHIFEPLGSFDFDLPVDGQRCLAGLMTMYDNDV 519
+P+ +P +GQ+ + LM MYD +V
Sbjct: 458 QQPVQPIDLSGVGVPENGQKMITELMAMYDRNV 490
>AT3G20770.1 | chr3:7260702-7262588 REVERSE LENGTH=629
Length = 628
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/460 (50%), Positives = 274/460 (59%), Gaps = 48/460 (10%)
Query: 85 RRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKYM 144
RRMWRD++R KRLKE + KKMSRAQDGILKYM
Sbjct: 53 RRMWRDKMRLKRLKEQDKGKEGVDAAKQRQSQEQARR---------KKMSRAQDGILKYM 103
Query: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXXX 204
LKMMEVC AQGFVYGIIPE GKPV+GASDNLR WWK+KVRFDRNGPAAI KYQA+N
Sbjct: 104 LKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPG 163
Query: 205 XXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
H+L ELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWP G E W
Sbjct: 164 IHEGNNPIGPTP-HTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDW 222
Query: 265 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTA 324
WP+ G+PK+ GP PYKKPHDLKKAWKV VLTAVIKHM PD+ K+R+LVRQSKCLQDKMTA
Sbjct: 223 WPQLGLPKDQGPAPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTA 282
Query: 325 KEIVTWLAVLKQEE----DLYLKXXXXXXXXXXXXXXXXXXVSGEYDVEGVDGD---EAG 377
KE TWLA++ QEE +LY + S +YDVEG + + E
Sbjct: 283 KESATWLAIINQEESLARELYPESCPPLSLSGGSCSLLMNDCS-QYDVEGFEKESHYEVE 341
Query: 378 NNNLQKAQNDATAFMDLTTTMDAALSNNKFLIMPLMKE-EAIDVDFIQKRSEPELMLSSD 436
+K N + M K P+ +E A + +F++KR +P L++
Sbjct: 342 ELKPEKVMNSSNFGM-----------VAKMHDFPVKEEVPAGNSEFMRKR-KPNRDLNTI 389
Query: 437 SHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHNXXXXXXESKPPPPHIFE--PLG 494
V+TC N+ C HS + GFLDRN R+ HQ AC H + P H+ E P+
Sbjct: 390 MDRTVFTCENLGCAHSEISRGFLDRNSRDNHQLACPHRDSRLPYGAAPSRFHVNEVKPVV 449
Query: 495 SF-----------DFDL----PVDGQRCLAGLMTMYDNDV 519
F DL P DGQ+ ++ LM+MYD +V
Sbjct: 450 GFPQPRPVNSVAQPIDLTGIVPEDGQKMISELMSMYDRNV 489
>AT1G73730.1 | chr1:27730434-27732363 REVERSE LENGTH=568
Length = 567
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/256 (61%), Positives = 181/256 (70%), Gaps = 12/256 (4%)
Query: 85 RRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKYM 144
RRMW+DRVR KR+KE Q+ KKMSRAQDGILKYM
Sbjct: 42 RRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQR-------KKMSRAQDGILKYM 94
Query: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXXX 204
LK+MEVC +GFVYGIIPEKGKPVSG+SDN+R+WWKEKV+FD+NGPAAIAKY+ +
Sbjct: 95 LKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEE----C 150
Query: 205 XXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
L +LQD TLGSLLS+LMQHCDPPQR++PLEKG PPPWWP G+E W
Sbjct: 151 LAFGKSDGNRNSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEW 210
Query: 265 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTA 324
W + G+PK PPY+KPHDLKK WKV VLTAVI HM PD+ K++R VRQSKCLQDKMTA
Sbjct: 211 WVKLGLPKSQS-PPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTA 269
Query: 325 KEIVTWLAVLKQEEDL 340
KE WLAVL QEE L
Sbjct: 270 KESAIWLAVLNQEESL 285
>AT5G65100.1 | chr5:26006835-26008508 REVERSE LENGTH=558
Length = 557
Score = 298 bits (762), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 160/209 (76%), Gaps = 1/209 (0%)
Query: 131 KKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGP 190
KKM+R+QD +LKYM+K+MEVC AQGFVYGI+PEKGKPV+G+SD+LR WWKE V+FD+ P
Sbjct: 94 KKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTAP 153
Query: 191 AAIAKYQADNXXXXXXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEK 250
A++ Y H LHELQDTTLGSLLSALMQHC PPQRRFPLEK
Sbjct: 154 NAVSDYLTLAAAQLISSNESLDPNSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEK 213
Query: 251 GVPPPWWPEGSEAWWPEAGVPK-ELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVR 309
G+ PPWWP G+E WW E G E GPPPY+KPHDL+KAWKV+VL AVIKHMSP++++VR
Sbjct: 214 GLAPPWWPNGTELWWGEQGAAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLERVR 273
Query: 310 RLVRQSKCLQDKMTAKEIVTWLAVLKQEE 338
RL RQSKCLQDKM AKE TW VL QEE
Sbjct: 274 RLARQSKCLQDKMMAKETDTWSRVLNQEE 302
>AT5G10120.1 | chr5:3169732-3171147 FORWARD LENGTH=472
Length = 471
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 173/259 (66%), Gaps = 13/259 (5%)
Query: 85 RRMWRDR-VRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKY 143
RRMW+DR + K+LK+ ++ KKM+R+QD +LKY
Sbjct: 27 RRMWKDRNLMEKKLKQQKRHSNDVVSFTTHRAEASRR----------KKMARSQDSVLKY 76
Query: 144 MLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXX 203
M+K+MEVC A+GFVYGI+PEKGKP++G+SD+LR WWKE V+FD+N P AI Y A
Sbjct: 77 MMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFDQNAPDAITDYLALAAAA 136
Query: 204 XXXXXXXXXXXXXX--HSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGS 261
H L ELQDTTLGSLLSALMQHC PPQRRFPLEKG+ PPWWP G+
Sbjct: 137 AAAELIDKSSSSSSLLHMLQELQDTTLGSLLSALMQHCMPPQRRFPLEKGIAPPWWPTGT 196
Query: 262 EAWWPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDK 321
E WW E G E G PPY+KPHDL+K+WKV+VL AVIKHMSP++ +VRRL RQSK LQDK
Sbjct: 197 ELWWGEQGAAHEHGAPPYRKPHDLRKSWKVSVLAAVIKHMSPNLGRVRRLARQSKSLQDK 256
Query: 322 MTAKEIVTWLAVLKQEEDL 340
M AKE TW VL QEE L
Sbjct: 257 MMAKETDTWSRVLNQEEAL 275
>AT5G21120.1 | chr5:7182629-7184185 FORWARD LENGTH=519
Length = 518
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 205/411 (49%), Gaps = 50/411 (12%)
Query: 85 RRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKYM 144
+++WRD+ R KRLKE+ + + M +AQDGILKYM
Sbjct: 52 KKIWRDKQRLKRLKEMAKNGLGTRLLLKQQHDDFPEHSSK------RTMYKAQDGILKYM 105
Query: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXXX 204
K ME AQGFVYGI+ E GK V+G+SDNLR WWK+KVRFDRNGPAAI K+Q D
Sbjct: 106 SKTMERYKAQGFVYGIVLENGKTVAGSSDNLREWWKDKVRFDRNGPAAIIKHQRDINLSD 165
Query: 205 XXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
L ELQDTTLG+LLSAL HC+PPQRRFPLEKGV PPWWP G E W
Sbjct: 166 GSDSGSEVGDSTAQKLLELQDTTLGALLSALFPHCNPPQRRFPLEKGVTPPWWPTGKEDW 225
Query: 265 WPEAGVPKELG--PPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKM 322
W + +P + PPPYKKPHDLKK WK+ VL VI+HM+ D+ + LVR+S+ LQ+KM
Sbjct: 226 WDQLSLPVDFRGVPPPYKKPHDLKKLWKIGVLIGVIRHMASDISNIPNLVRRSRSLQEKM 285
Query: 323 TAKEIVTWLAVLKQEEDLYLKXXXXXXXXXXXXXXXXXX---------VSGEYDVEGVDG 373
T++E WLA L +E+ + + S +YDVE + G
Sbjct: 286 TSREGALWLAALYREKAIVDQIAMSRENNNTSNFLVPATGGDPDVLFPESTDYDVELIGG 345
Query: 374 DEAGNNNLQKAQNDATAFMDLTTTMDAALSNNKFLIMPLMKEEAIDVDFIQKRSEPELML 433
N + +N+ D MP+
Sbjct: 346 THRTNQQYPEFENNYNCVYKRKFEEDFG--------MPM--------------------- 376
Query: 434 SSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHNXXXXXXESKP 484
H + TC N CP+S +GFLDRN R HQ C + +KP
Sbjct: 377 ----HPTLLTCENSLCPYSQPHMGFLDRNLRENHQMTCPYKVTSFYQPTKP 423
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,871,281
Number of extensions: 423567
Number of successful extensions: 1014
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1000
Number of HSP's successfully gapped: 6
Length of query: 593
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 489
Effective length of database: 8,255,305
Effective search space: 4036844145
Effective search space used: 4036844145
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)