BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0685700 Os07g0685700|AK060806
(593 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0685700 Ethylene insensitive 3 family protein 903 0.0
Os03g0324300 Similar to EIL3 516 e-146
Os09g0490200 Similar to EIL3 328 6e-90
Os08g0508700 Similar to EIL3 316 3e-86
Os04g0456900 250 2e-66
Os02g0689132 Ethylene insensitive 3 family protein 108 9e-24
Os07g0272500 79 1e-14
>Os07g0685700 Ethylene insensitive 3 family protein
Length = 593
Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/593 (77%), Positives = 457/593 (77%)
Query: 1 MMGAAVTMVDRRMAFAAEADVDSKAAXXXXXXXXXXXXXDLVNPAXXXXXXXXVHEGGFA 60
MMGAAVTMVDRRMAFAAEADVDSKAA DLVNPA VHEGGFA
Sbjct: 1 MMGAAVTMVDRRMAFAAEADVDSKAAFGFFGGECFVGEGDLVNPAPPPPQQQQVHEGGFA 60
Query: 61 AXXXXXXXXXXXXXXXXXXXXXXXRRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXX 120
A RRMWRDRVRHKRLKELQQ
Sbjct: 61 AEDESDGDDDDDDDDDVDDIEELERRMWRDRVRHKRLKELQQSRAGRESRAGDAGGGGRQ 120
Query: 121 XXXXXXXXXXKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWK 180
KKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWK
Sbjct: 121 QRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWK 180
Query: 181 EKVRFDRNGPAAIAKYQADNXXXXXXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCD 240
EKVRFDRNGPAAIAKYQADN HSLHELQDTTLGSLLSALMQHCD
Sbjct: 181 EKVRFDRNGPAAIAKYQADNAVPGCDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCD 240
Query: 241 PPQRRFPLEKGVPPPWWPEGSEAWWPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKH 300
PPQRRFPLEKGVPPPWWPEGSEAWWPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKH
Sbjct: 241 PPQRRFPLEKGVPPPWWPEGSEAWWPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKH 300
Query: 301 MSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKXXXXXXXXXXXXXXXXX 360
MSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLK
Sbjct: 301 MSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGALPPPLSAASFNA 360
Query: 361 XVSGEYDVEGVDGDEAGNNNLQKAQNDATAFMDLTTTMDAALSNNKFLIMPLMKEEAIDV 420
VSGEYDVEGVDGDEAGNNNLQKAQNDATAFMDLTTTMDAALSNNKFLIMPLMKEEAIDV
Sbjct: 361 SVSGEYDVEGVDGDEAGNNNLQKAQNDATAFMDLTTTMDAALSNNKFLIMPLMKEEAIDV 420
Query: 421 DFIQKRSEPELMLSSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHNXXXXXX 480
DFIQKRSEPELMLSSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHN
Sbjct: 421 DFIQKRSEPELMLSSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHNAAAAAA 480
Query: 481 ESKPPPPHIFEPLGSFDFDLPVDGQRCLAGLMTMYDNDVXXXXXXXXXXXXXXXXNFFIR 540
ESKPPPPHIFEPLGSFDFDLPVDGQRCLAGLMTMYDNDV NFFIR
Sbjct: 481 ESKPPPPHIFEPLGSFDFDLPVDGQRCLAGLMTMYDNDVAAATQMHHHHHQQQQANFFIR 540
Query: 541 DDAPFGGDVXXXXXXXPEFRFSSNFNVTGGGAVDYGGAMQQPPAKYAGSNWFY 593
DDAPFGGDV PEFRFSSNFNVTGGGAVDYGGAMQQPPAKYAGSNWFY
Sbjct: 541 DDAPFGGDVAATAAAAPEFRFSSNFNVTGGGAVDYGGAMQQPPAKYAGSNWFY 593
>Os03g0324300 Similar to EIL3
Length = 528
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 298/525 (56%), Positives = 326/525 (62%), Gaps = 95/525 (18%)
Query: 85 RRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKYM 144
RRMWRDR++ KRLKELQ KKMSRAQDGILKYM
Sbjct: 83 RRMWRDRMKLKRLKELQ--LSRGKDPAGGVVGDPSKPRQSQEQARRKKMSRAQDGILKYM 140
Query: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXXX 204
LKMMEVC AQGFVYGIIPEKGKPVSGASDNLR WWKEKVRFDRNGPAAIAKYQADN
Sbjct: 141 LKMMEVCRAQGFVYGIIPEKGKPVSGASDNLRGWWKEKVRFDRNGPAAIAKYQADNAVPG 200
Query: 205 XXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
HSL ELQDTTLGSLLSALMQHCDPPQRR+PLEKGVPPPWWP G E W
Sbjct: 201 FESELASGTGSP-HSLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPTGDEEW 259
Query: 265 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTA 324
WPE G+PK+ GPPPYKKPHDLKKAWKV+VLTAVIKHMSPD++K+RRLVRQSKCLQDKMTA
Sbjct: 260 WPELGIPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTA 319
Query: 325 KEIVTWLAVLKQEEDLYLKXXXXXX----XXXXXXXXXXXXVSGEYDVEGVD---GDEAG 377
KEI TWLAV+KQEE+LYLK S EYDV+ VD GDEAG
Sbjct: 320 KEISTWLAVVKQEEELYLKLNPGARPPAPTGGITSAISFNASSSEYDVDVVDDCKGDEAG 379
Query: 378 NNNLQKA--QNDATAFMDLTTTMDAALSNNKFLIMPLMKEEAIDVDFIQKRS----EPEL 431
N QKA D TAF + AA+ N+KFL+ MKEEA DV+FIQKRS EPEL
Sbjct: 380 N---QKAVVVADPTAF-----NLGAAMLNDKFLMPASMKEEATDVEFIQKRSASGAEPEL 431
Query: 432 MLSSDSHARVYTCGNVQCPHSNYALGFLDRNERNAHQYACKHNXXXXXXESKPPPPHIFE 491
ML++ RVYTC NVQCPHS+Y GFLDRN RN+HQY CK+N +
Sbjct: 432 MLNN----RVYTCHNVQCPHSDYGYGFLDRNARNSHQYTCKYN----------------D 471
Query: 492 PLGSFDFDLPVDGQRCLAGLMTMYDNDVXXXXXXXXXXXXXXXXNFFIRDDAPFG---GD 548
PL F FIRDD PFG GD
Sbjct: 472 PLQQF-----------------------------------------FIRDDTPFGNQMGD 490
Query: 549 VXXXXXXXPEFRFSSNFNVTGGGAVDYGGAMQQPPAKYAGSNWFY 593
+ EFRF S FN++ GAV+Y GAMQ K GSNW+Y
Sbjct: 491 INGAS----EFRFGSGFNMS--GAVEYPGAMQG-QQKNDGSNWYY 528
>Os09g0490200 Similar to EIL3
Length = 565
Score = 328 bits (841), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 158/258 (61%), Positives = 187/258 (72%), Gaps = 7/258 (2%)
Query: 85 RRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKYM 144
RRMW+DR++ +R+KE Q KKMSRAQDGILKYM
Sbjct: 42 RRMWKDRIKLRRIKERQDRLALALQQAELDKSKGKPISDQAMR---KKMSRAQDGILKYM 98
Query: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXXX 204
LK+MEVCNA+GFVYGIIP+KGKPVSGASDN+R+WWKEKV+FD+NGPAAIAKY+++N
Sbjct: 99 LKLMEVCNARGFVYGIIPDKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYESEN---L 155
Query: 205 XXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
HSL +LQD TLGSLLS+LMQHCDPPQR++PLE+G PPPWWP G+E W
Sbjct: 156 ASADAPSSGIKSQHSLMDLQDATLGSLLSSLMQHCDPPQRKYPLERGTPPPWWPSGNEDW 215
Query: 265 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTA 324
W G+P+ PPYKKPHDLKK WKV VLT VIKHMSP+ DK+R VR+SKCLQDKMTA
Sbjct: 216 WIALGLPRG-QIPPYKKPHDLKKVWKVGVLTGVIKHMSPNFDKIRNHVRKSKCLQDKMTA 274
Query: 325 KEIVTWLAVLKQEEDLYL 342
KE + WL VL++EE L L
Sbjct: 275 KESLIWLGVLQREERLVL 292
>Os08g0508700 Similar to EIL3
Length = 619
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/259 (58%), Positives = 181/259 (69%), Gaps = 10/259 (3%)
Query: 85 RRMWRDRVRHKRLKELQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKMSRAQDGILKYM 144
RRMW+D+++ KR+KE QQ KK +R QDGIL+YM
Sbjct: 42 RRMWKDKIKLKRIKERQQKLALQQAALEESKTKKMSEQALR-----KKTARVQDGILRYM 96
Query: 145 LKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAKYQADNXXXX 204
LK+MEVCNA+GFVYGIIP KGKPVSGASDN+R+WWKEKVRFD NGP AIAKY+ N
Sbjct: 97 LKLMEVCNARGFVYGIIPHKGKPVSGASDNIRAWWKEKVRFDVNGPVAIAKYEVKN---S 153
Query: 205 XXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 264
HSL +LQD TLGSLLS+LMQHC P QR++PL+KGVPPPWWP G+E W
Sbjct: 154 MLVDAKRRGVLNQHSLMDLQDATLGSLLSSLMQHCSPQQRKYPLDKGVPPPWWPSGNEDW 213
Query: 265 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTA 324
W G+P + PPY+KPHDLKK WKV VLT VIKHM+P+ DK+R VR+SKCLQDKMTA
Sbjct: 214 WISLGLPMGIS-PPYRKPHDLKKVWKVGVLTGVIKHMAPNFDKIRNCVRKSKCLQDKMTA 272
Query: 325 KEIVTWLAVLKQEEDLYLK 343
KE + WL VL++EE +Y +
Sbjct: 273 KESLIWLGVLRREE-IYFR 290
>Os04g0456900
Length = 445
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 153/213 (71%), Gaps = 8/213 (3%)
Query: 131 KKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGP 190
K M RAQDG+L++MLKMME CNA+GFVYGI+ E G PVSG+SD+LR WWK+ V FDR GP
Sbjct: 92 KAMLRAQDGVLRHMLKMMEACNARGFVYGIVDESGVPVSGSSDSLRGWWKDDVAFDRAGP 151
Query: 191 AAIAKYQADNXXXXXXXXXXXXXXXXXHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEK 250
A++ H L ++QD+TLGSLLSAL+QHC+PPQR FPL++
Sbjct: 152 TALS-----GRGGRGSPRSPAAAASFLHGLLDIQDSTLGSLLSALIQHCEPPQRSFPLDR 206
Query: 251 GVPPPWWPEGSEAWWPEAGVPK-ELGPPPYKKPHDLKKAWKVAVL--TAVIKHMSPDVDK 307
G+PPPWWP G EAWW G + GPPPY+KPHDLKKAWK+++L +AVIKH+SP D+
Sbjct: 207 GLPPPWWPTGGEAWWGLQGEAQASQGPPPYRKPHDLKKAWKISLLRASAVIKHLSPRFDQ 266
Query: 308 VRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDL 340
+R+LV QSK LQ KM+A++ TW V+ QEE L
Sbjct: 267 IRKLVWQSKRLQHKMSARDADTWSRVITQEEAL 299
>Os02g0689132 Ethylene insensitive 3 family protein
Length = 84
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/52 (96%), Positives = 50/52 (96%)
Query: 144 MLKMMEVCNAQGFVYGIIPEKGKPVSGASDNLRSWWKEKVRFDRNGPAAIAK 195
MLKMMEVCNAQGFVYGIIPEKGKPVS ASDNLRSWWKEKVRFDRNGPAAI K
Sbjct: 1 MLKMMEVCNAQGFVYGIIPEKGKPVSSASDNLRSWWKEKVRFDRNGPAAIVK 52
>Os07g0272500
Length = 465
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 223 LQDTTLGSLLSALMQHCDPPQRRFPLEKGVP--PPWWPEGSEAWWPEAGVPKELGPPPYK 280
L D L ++ LM+ C PPQ +PL P PPWWP G E WWPE G + PPY+
Sbjct: 100 LADHVLERMVKVLMRKCHPPQALYPLIGKSPLRPPWWPTGREQWWPELGAGAVV--PPYR 157
Query: 281 KPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDL 340
L KA K + A++K++ PD +++ VR + + ++T E W + E +
Sbjct: 158 PAPLLSKAEKEVAVVAMVKNLVPDFERLFMAVRMAPSVTSRITDAEARAWDDGVAGERET 217
Query: 341 YL 342
Y+
Sbjct: 218 YM 219
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,920,140
Number of extensions: 722697
Number of successful extensions: 1669
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1650
Number of HSP's successfully gapped: 8
Length of query: 593
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 487
Effective length of database: 11,501,117
Effective search space: 5601043979
Effective search space used: 5601043979
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)