Os08g0508700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to EIL3.
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Os08g0508700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to EIL3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 474.15 | 1.02 | 7.78 | -2 | 0.383 | -6.53 | 1.2 | -2.4 | -2.18 | 10.1 | 20.48 | 307 | -- | -- |
| 474.65 | 1.01 | 7.81 | -2.03 | 0.371 | -5.4 | 1.16 | -- | -2.21 | 10.3 | 20.88 | 306 | -- | -- |
| 478.47 | 1.02 | 7.79 | -1.95 | 0.387 | -5.94 | -- | -1.59 | -2.19 | 9.13 | 20.83 | 306 | -- | -- |
| 479.35 | 1.02 | 7.81 | -2 | 0.396 | -5.38 | -- | -- | -2.21 | 9.35 | 20.92 | 314 | -- | -- |
| 486.94 | 1.03 | 7.8 | -1.95 | -- | -5.82 | -- | -1.35 | -2.19 | -- | 20.85 | 291 | -- | -- |
| 677.64 | 1.22 | 7.71 | -0.976 | 0.416 | -- | 0.881 | -- | -1.77 | 12 | -- | -- | -- | -- |
| 681.01 | 1.22 | 7.71 | -0.94 | 0.413 | -- | -- | -- | -1.76 | 11.9 | -- | -- | -- | -- |
| 487.71 | 1.03 | 7.82 | -1.98 | -- | -5.34 | -- | -- | -2.2 | -- | 20.91 | 293 | -- | -- |
| 571.25 | 1.11 | 7.74 | -- | 0.297 | -4.21 | -- | -- | -1.96 | 10.5 | 21.09 | 289 | -- | -- |
| 691.75 | 1.23 | 7.72 | -0.953 | -- | -- | -- | -- | -1.77 | -- | -- | -- | -- | -- |
| 704.32 | 1.24 | 7.68 | -- | 0.425 | -- | -- | -- | -1.66 | 12.1 | -- | -- | -- | -- |
| 578.07 | 1.12 | 7.75 | -- | -- | -4 | -- | -- | -1.92 | -- | 21.1 | 265 | -- | -- |
| 715.71 | 1.25 | 7.69 | -- | -- | -- | -- | -- | -1.66 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 462.73 | humidity | 70 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 2 | 463.51 | humidity | 70 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 4 | 465.62 | humidity | 70 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 7 | 467.45 | humidity | 70 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 16 | 469.93 | temperature | 15 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 17 | 469.94 | humidity | 60 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 20 | 470.52 | temperature | 15 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 23 | 471.24 | temperature | 15 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 24 | 471.40 | humidity | 60 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 35 | 473.38 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 38 | 473.55 | temperature | 20 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 48 | 475.09 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 53 | 475.49 | temperature | 15 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 60 | 476.22 | temperature | 15 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 80 | 477.35 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 16 |
| 90 | 477.99 | humidity | 50 | 43200 | < th | dose dependent | rect. | 3 | 8 |
| 113 | 478.58 | temperature | 15 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 118 | 478.70 | temperature | 15 | 14400 | > th | dose independent | sin | 0 | NA |
| 126 | 478.97 | temperature | 20 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 128 | 479.16 | temperature | 15 | 14400 | > th | dose independent | rect. | 4 | 19 |
| 140 | 479.58 | temperature | 15 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 149 | 480.03 | humidity | 60 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 164 | 480.34 | temperature | 15 | 14400 | < th | dose independent | sin | 2 | NA |
| 199 | 481.17 | temperature | 20 | 270 | < th | dose dependent | no | NA | NA |
| 202 | 481.24 | temperature | 20 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 206 | 481.35 | temperature | 15 | 14400 | < th | dose independent | no | NA | NA |
| 215 | 481.51 | temperature | 15 | 14400 | < th | dose independent | rect. | 6 | 23 |
| 229 | 481.79 | temperature | 15 | 14400 | > th | dose independent | sin | 16 | NA |
| 237 | 481.89 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 242 | 481.96 | temperature | 15 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 259 | 482.22 | temperature | 15 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 270 | 482.34 | temperature | 15 | 14400 | > th | dose independent | rect. | 12 | 16 |
| 280 | 482.46 | temperature | 15 | 14400 | < th | dose independent | sin | 15 | NA |
| 285 | 482.56 | temperature | 20 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 311 | 482.87 | temperature | 15 | 14400 | > th | dose independent | rect. | 15 | 11 |
| 375 | 483.73 | temperature | 15 | 14400 | > th | dose independent | rect. | 10 | 23 |
| 385 | 483.84 | temperature | 15 | 14400 | > th | dose independent | rect. | 11 | 18 |
| 404 | 484.19 | temperature | 15 | 14400 | > th | dose independent | no | NA | NA |
| 425 | 484.49 | temperature | 20 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 429 | 484.54 | temperature | 15 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 455 | 484.89 | temperature | 15 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 560 | 486.11 | temperature | 15 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 589 | 486.43 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 679 | 487.73 | wind | 1 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 727 | 488.58 | wind | 7 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 744 | 488.94 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 752 | 489.12 | humidity | 50 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 769 | 489.30 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 845 | 490.81 | temperature | 15 | 4320 | < th | dose dependent | rect. | 6 | 6 |
| 866 | 491.07 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 883 | 491.37 | temperature | 20 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 884 | 491.37 | temperature | 15 | 4320 | < th | dose dependent | rect. | 5 | 13 |
| 885 | 491.39 | temperature | 15 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 909 | 491.86 | humidity | 50 | 43200 | < th | dose dependent | sin | 10 | NA |
| 913 | 491.88 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 949 | 492.42 | temperature | 15 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 952 | 492.49 | temperature | 15 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 961 | 492.62 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 992 | 493.03 | temperature | 15 | 4320 | < th | dose independent | rect. | 3 | 2 |