Os03g0324300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to EIL3.
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Os03g0324300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to EIL3.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.31 | 0.295 | 14.2 | 1.04 | 1 | 0.778 | 0.441 | 0.53 | 0.942 | 23.8 | 60.73 | 1215 | -- | -- |
| 39.7 | 0.293 | 14.2 | 1.1 | 1.01 | 0.805 | 0.357 | -- | 0.952 | 23.8 | 60.17 | 1211 | -- | -- |
| 40.05 | 0.295 | 14.2 | 1.03 | 0.962 | 0.755 | -- | 0.419 | 0.944 | 23.9 | 61.39 | 1267 | -- | -- |
| 40.23 | 0.295 | 14.2 | 1.08 | 1.01 | 0.802 | -- | -- | 0.95 | 23.9 | 60.43 | 1206 | -- | -- |
| 65.7 | 0.38 | 14.2 | 1.05 | -- | 0.78 | -- | 0.0612 | 0.932 | -- | 61.39 | 1267 | -- | -- |
| 52.29 | 0.339 | 14.2 | 1.07 | 0.844 | -- | 0.27 | -- | 0.895 | 23.6 | -- | -- | -- | -- |
| 52.61 | 0.34 | 14.2 | 1.06 | 0.843 | -- | -- | -- | 0.893 | 23.7 | -- | -- | -- | -- |
| 65.71 | 0.379 | 14.2 | 1.06 | -- | 0.782 | -- | -- | 0.932 | -- | 61.39 | 1267 | -- | -- |
| 69.75 | 0.389 | 14.2 | -- | 0.852 | 0.93 | -- | -- | 0.898 | 23.7 | 78.04 | 1391 | -- | -- |
| 97.3 | 0.461 | 14.2 | 1.08 | -- | -- | -- | -- | 0.903 | -- | -- | -- | -- | -- |
| 82.15 | 0.424 | 14.3 | -- | 0.856 | -- | -- | -- | 0.775 | 23.7 | -- | -- | -- | -- |
| 95.13 | 0.456 | 14.2 | -- | -- | 0.8 | -- | -- | 0.816 | -- | 61.39 | 1267 | -- | -- |
| 128.21 | 0.529 | 14.2 | -- | -- | -- | -- | -- | 0.783 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.29 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 3 | 38.44 | humidity | 80 | 1440 | > th | dose independent | sin | 0 | NA |
| 4 | 38.44 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 7 | 38.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 26 | 38.61 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 37 | 38.68 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 17 |
| 115 | 38.96 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 143 | 39.10 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 170 | 39.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 178 | 39.29 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 20 |
| 184 | 39.31 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 205 | 39.36 | humidity | 80 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 209 | 39.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 257 | 39.49 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 18 |
| 288 | 39.57 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 340 | 39.62 | humidity | 70 | 1440 | > th | dose dependent | sin | 23 | NA |
| 383 | 39.67 | humidity | 60 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 400 | 39.71 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 402 | 39.71 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 422 | 39.75 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 448 | 39.78 | humidity | 60 | 1440 | > th | dose dependent | rect. | 1 | 21 |
| 497 | 39.84 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 502 | 39.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 19 | 21 |
| 510 | 39.85 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 529 | 39.88 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 536 | 39.89 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 541 | 39.90 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 588 | 39.95 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 693 | 40.06 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 734 | 40.12 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 774 | 40.14 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 798 | 40.16 | humidity | 60 | 1440 | > th | dose dependent | rect. | 1 | 16 |
| 939 | 40.27 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 956 | 40.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 957 | 40.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 958 | 40.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 23 | 23 |