BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0439100 Os08g0439100|AK067282
(763 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0439100 Pleckstrin homology-type domain containing pro... 1389 0.0
Os02g0102800 Pleckstrin homology-type domain containing pro... 276 3e-74
Os08g0152600 Protein of unknown function DUF1336 domain con... 181 1e-45
Os10g0479800 Protein of unknown function DUF1336 domain con... 122 7e-28
Os06g0116500 Pleckstrin homology-type domain containing pro... 91 3e-18
Os10g0455900 Pleckstrin homology-type domain containing pro... 73 8e-13
>Os08g0439100 Pleckstrin homology-type domain containing protein
Length = 763
Score = 1389 bits (3596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/748 (91%), Positives = 682/748 (91%)
Query: 16 GGEVSEVELSEAXXXXXXXXXXXXXXXXXXXXXXXXWVYHLGVNSIGHEYRHLRFLVIRG 75
GGEVSEVELSEA WVYHLGVNSIGHEYRHLRFLVIRG
Sbjct: 16 GGEVSEVELSEAGSPDVGSQSSGSGGSGRSTAGSSGWVYHLGVNSIGHEYRHLRFLVIRG 75
Query: 76 KTVAMYKRDPSKNPGIQPIRKGVVSHTLMVEELGRRITSHGELYVLRFYNRLDQTKKGEI 135
KTVAMYKRDPSKNPGIQPIRKGVVSHTLMVEELGRRITSHGELYVLRFYNRLDQTKKGEI
Sbjct: 76 KTVAMYKRDPSKNPGIQPIRKGVVSHTLMVEELGRRITSHGELYVLRFYNRLDQTKKGEI 135
Query: 136 ACGDPGEARKWVEAFEQAKQQADYDLMTRGVSWNRSQNENELNLDGHRPRVRRYAQGLGK 195
ACGDPGEARKWVEAFEQAKQQADYDLMTRGVSWNRSQNENELNLDGHRPRVRRYAQGLGK
Sbjct: 136 ACGDPGEARKWVEAFEQAKQQADYDLMTRGVSWNRSQNENELNLDGHRPRVRRYAQGLGK 195
Query: 196 LVRIGKGPEKLLRQSSNLQSHEIINTNFGGDSGDAFEAHEWRYVRTFNGIRIFEDIANTX 255
LVRIGKGPEKLLRQSSNLQSHEIINTNFGGDSGDAFEAHEWRYVRTFNGIRIFEDIANT
Sbjct: 196 LVRIGKGPEKLLRQSSNLQSHEIINTNFGGDSGDAFEAHEWRYVRTFNGIRIFEDIANTK 255
Query: 256 XXXXXXXXXXXXXXANPDTVFAVVLSSDKHKRYEWDMLTADLELVETIDGYYDVVYGTYE 315
ANPDTVFAVVLSSDKHKRYEWDMLTADLELVETIDGYYDVVYGTYE
Sbjct: 256 GGKGVLLKSVGVVGANPDTVFAVVLSSDKHKRYEWDMLTADLELVETIDGYYDVVYGTYE 315
Query: 316 PRYLSWWKTKKDFVFSRQWFRGQDGAYTILQIPACHKNKPPRHGYERTKINSSTWELRRL 375
PRYLSWWKTKKDFVFSRQWFRGQDGAYTILQIPACHKNKPPRHGYERTKINSSTWELRRL
Sbjct: 316 PRYLSWWKTKKDFVFSRQWFRGQDGAYTILQIPACHKNKPPRHGYERTKINSSTWELRRL 375
Query: 376 NPPGSSTPKCLVTHMLEMSPSFWDRWKRRHNENFDRSIAFALLSQVAGLREYFAANPALT 435
NPPGSSTPKCLVTHMLEMSPSFWDRWKRRHNENFDRSIAFALLSQVAGLREYFAANPALT
Sbjct: 376 NPPGSSTPKCLVTHMLEMSPSFWDRWKRRHNENFDRSIAFALLSQVAGLREYFAANPALT 435
Query: 436 SDLPSTVVKPKQSDSLIIQSELEDSELNDEFYDALARGXXXXXXXXXXXXXMIPKAGKVK 495
SDLPSTVVKPKQSDSLIIQSELEDSELNDEFYDALARG MIPKAGKVK
Sbjct: 436 SDLPSTVVKPKQSDSLIIQSELEDSELNDEFYDALARGESFEDEDSDDDDDMIPKAGKVK 495
Query: 496 FKNISWAIAGLAMKPTKASVEKSELVTNSTPVTIDSNHFHGTLRRAKSENDPNSWSEPGG 555
FKNISWAIAGLAMKPTKASVEKSELVTNSTPVTIDSNHFHGTLRRAKSENDPNSWSEPGG
Sbjct: 496 FKNISWAIAGLAMKPTKASVEKSELVTNSTPVTIDSNHFHGTLRRAKSENDPNSWSEPGG 555
Query: 556 EKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPFI 615
EKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPFI
Sbjct: 556 EKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPFI 615
Query: 616 LVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMVK 675
LVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMVK
Sbjct: 616 LVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMVK 675
Query: 676 RAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSVARSIIXXXXXXXXXXXXXXAILIE 735
RAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSVARSII AILIE
Sbjct: 676 RAVGTKACLLGKAVTCNYLRQDNFLEIDVDIGSSSVARSIIGLVLGYVTGLVVDLAILIE 735
Query: 736 AKEEKELPEYILGTVRLNRANPDSAVPI 763
AKEEKELPEYILGTVRLNRANPDSAVPI
Sbjct: 736 AKEEKELPEYILGTVRLNRANPDSAVPI 763
>Os02g0102800 Pleckstrin homology-type domain containing protein
Length = 804
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 210/735 (28%), Positives = 334/735 (45%), Gaps = 64/735 (8%)
Query: 52 WVYHLGVNSIGHEYRHLRFLVIRGKTVAMYKRDPSKNPGIQPIRKGVVSHTLMVEELGRR 111
W+ G IG + H R+ V+ + +A YK+ P N + P++ ++ VE+ G +
Sbjct: 76 WMVRYGRRKIGRSFFHTRYFVLDSRLLAYYKKKPKDN--MVPLKSLLIDGNCRVEDRGLK 133
Query: 112 ITSHGEL-YVLRFYNRLDQTKKGEIACGDPGEARKWVEAFEQAKQQ------------AD 158
T HG++ YVL YN+ ++ + + D +A W + E Q A
Sbjct: 134 -THHGQMVYVLCVYNKKEKEHQITMGAYDIEDALAWKKNIELIIDQQENMTSKNRKAFAS 192
Query: 159 YDLMTR-GVSWNRSQNENELNLDGHRPRVRRYAQGLGKLVRIGKGPEKLLRQSSNLQSHE 217
D T G + S +++ + RP + R IG GP + + + + H+
Sbjct: 193 MDFDTELGGQFIFSDHDSAAEDEEERPMLIRRTT-------IGNGPPESIHDWT--KEHD 243
Query: 218 IINTNFGGDSGDAFEAHEWRYVRTFNGIRIFEDIAN---TXXXXXXXXXXXXXXXANPDT 274
I N D WR +R NG+RIFE++ A +
Sbjct: 244 IGPPN-QIDPIQVSSKKNWRLLRCQNGLRIFEELLEFDYLARSCSRAMRAVGVVEATCEA 302
Query: 275 VFAVVLSSDKHKRYEWDMLTADLELVETIDGYYDVVYGTYEPRYLSWWKTKKDFVFSRQW 334
+F +V+S D RYEWD LVE +DG+ ++Y + + +D + R W
Sbjct: 303 IFGLVMSMDV-TRYEWDCSFRYGSLVEEVDGHTAILYHKLQLHWCPMLVWPRDLCYVRYW 361
Query: 335 FRGQDGAYTILQIPACHKNKPPRHGYERTKINSSTWELRRLNPPGSSTPKCLVTHMLEMS 394
R DG+Y +L H N + GY R I S +++ L + P+ V H++++
Sbjct: 362 RRNDDGSYVVLFRSTEHPNCGRQKGYVRAFIESGGFKISPLKC-RNGRPRTQVQHLMQID 420
Query: 395 PSFWDRWKRRHNENFDRSIAFALLSQVAGLREYFAANPALTSDLPSTVVKPKQSDSLIIQ 454
W ++ +F + + VAGLREYF+ T P V D+ +Q
Sbjct: 421 ---LRGWLLNYSPSFQYHSLLQIQNCVAGLREYFSQTDE-THITPRIPVMENMVDTSAVQ 476
Query: 455 SELEDSELNDEFYDALARGXXXXXXXXXXXXXMIPKAGKVKFKNIS----WAIAGLAMKP 510
+D + + E D+ + P G+ KN+ +
Sbjct: 477 ---KDDKKSTEEVDSKTK---------------TPDRGQADSKNMGIIDEETDEDEDYQV 518
Query: 511 TKASVE----KSELVTNSTPVTIDSNHFHGTLRRAKSENDPNSWSEPGGEKFMIRGKTYL 566
+A++E K + P ID + F G LR E N W+ P + F +R K +
Sbjct: 519 PEANIEEDPNKDAKRADEPPEKIDLSCFSGILRCDADEKSRNCWTVPDSKLFKVRSKNFP 578
Query: 567 TDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSLVQSEAAKKIPFILVINLQVPAKP 626
D +K+ L++L A+DWFK +R D+V K V AA+K V N+Q+P
Sbjct: 579 HDKSKIPAASYLMELAAIDWFKDSKRMDNVGRQ-KGCVAQVAAEKGMHTFVANIQIPGST 637
Query: 627 NYNLVMYYAAERPVNKDSLLGRFIDGTDAFRDARFKLIPSIVEGYWMVKRAVGTKACLLG 686
+Y+LVMY+ + + K SLL RF DG D FR++R KLIPS+ +G W+V+++VG+ CLLG
Sbjct: 638 HYSLVMYFVT-KSLKKGSLLQRFFDGDDEFRNSRLKLIPSVPKGSWIVRQSVGSTPCLLG 696
Query: 687 KAVTCNYLRQDNFLEIDVDIGSSSVARSIIXXXXXXXXXXXXXXAILIEAKEEKELPEYI 746
KAV C+Y+R +LE+DVDIGSS+VA ++ A LI+A +ELPE +
Sbjct: 697 KAVDCSYVRGAGYLEVDVDIGSSAVANGVLGLVFGVVTTLVVDMAFLIQANTYEELPEQV 756
Query: 747 LGTVRLNRANPDSAV 761
+G RL P +A+
Sbjct: 757 IGAARLAHVEPAAAI 771
>Os08g0152600 Protein of unknown function DUF1336 domain containing protein
Length = 361
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 133/223 (59%), Gaps = 6/223 (2%)
Query: 544 ENDPNSWSEPGGEKFMIRGKTYLTDYTKVVGGDPLLKLIAVDWFKADERFDSVALHPKSL 603
+N PN W+ P G+ FM+RG YL K+ GG+ LLK + DW K+ + + +
Sbjct: 28 DNCPNGWATPPGDTFMVRGPDYLATKVKIPGGEYLLKPLGFDWMKSPAKICEILNNKSHR 87
Query: 604 VQSEAAKKI-----PFILVINLQVPAKPNYNLVMYYAAERPVNKDSLLGRFIDGTDAFRD 658
V+ ++ PF+ NLQ+P+K NY+ + Y+ + PV + SL+ +F+ G +AFR
Sbjct: 88 VRKAIDGEVLRGNQPFVWAFNLQLPSKDNYSAIFYFVSLEPVPEGSLMDQFLKGDEAFRK 147
Query: 659 ARFKLIPSIVEGYWMVKRAVGTKA-CLLGKAVTCNYLRQDNFLEIDVDIGSSSVARSIIX 717
+R KLI +IV G W+V+ AVG +A C+LG+A+TC Y + NF+EIDVD+GSS VA +I+
Sbjct: 148 SRLKLIANIVRGPWIVRTAVGEQAICILGRALTCKYTQGSNFIEIDVDVGSSIVANAIVH 207
Query: 718 XXXXXXXXXXXXXAILIEAKEEKELPEYILGTVRLNRANPDSA 760
A LIE + E ELPE +LG VR + NP SA
Sbjct: 208 LAFGYVQTLTVDLAFLIEGQTESELPERLLGAVRFSELNPGSA 250
>Os10g0479800 Protein of unknown function DUF1336 domain containing protein
Length = 120
Score = 122 bits (307), Expect = 7e-28, Method: Composition-based stats.
Identities = 56/116 (48%), Positives = 79/116 (68%)
Query: 648 RFIDGTDAFRDARFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCNYLRQDNFLEIDVDIG 707
RF++G DAFR++RFKLIP I +G W+VK++VG KACL+G+A+ NY R N+LE+ VDIG
Sbjct: 2 RFVNGDDAFRNSRFKLIPYISKGSWIVKQSVGKKACLVGQALEINYFRGSNYLELGVDIG 61
Query: 708 SSSVARSIIXXXXXXXXXXXXXXAILIEAKEEKELPEYILGTVRLNRANPDSAVPI 763
SS+VAR ++ A L++ ++ELPE++LGT RLN + AV I
Sbjct: 62 SSTVARGVVSLVLGYLNNLVIEMAFLVQGNTQEELPEFLLGTCRLNYLDASKAVSI 117
>Os06g0116500 Pleckstrin homology-type domain containing protein
Length = 366
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 35/319 (10%)
Query: 52 WVYHLGVNSIGHEYRHLRFLVIRGKTVAMYKRDPSKNPGIQPIRKGVVSHTLMVEELGRR 111
W+ G IG + R+ V+ K +A YK+ P N + P++ + VE+ G +
Sbjct: 57 WMLRYGRRKIGRSFVRTRYFVLDNKLLAYYKKQPKDN--MVPVKALQIDGNCRVEDRGLK 114
Query: 112 ITSHGEL-YVLRFYNRLDQTKKGEIACGDPGEARKWVEAFE---------------QAKQ 155
T HG++ YVL YN+ ++ + D +A W + E +A
Sbjct: 115 -THHGQMVYVLCIYNKKEKENHITMGAHDIEDALVWKKKLELLIDQQQDTMTAKNRKAFA 173
Query: 156 QADYDLMTRG-VSWNRSQNENELNLDGHRPRVRRYAQGLGKLVRIGKGPEKLLRQSSNLQ 214
D+D+ G +S++ + E D PR L + IG GP + +
Sbjct: 174 SLDFDMEFGGPLSFSDRDSGPE---DEEEPR-----PTLLRRTTIGNGPPDSVHDWTKEP 225
Query: 215 SHEIINTNFGGDSGDAFEAHEWRYVRTFNGIRIFEDIANTXXXXXXXXXXXXXX---XAN 271
+ + N D+ A+ WR +R NG+RIFE++ A
Sbjct: 226 DIGLSDQN---DTNHAYSRKNWRLLRCQNGLRIFEELVEVEYLARSCSRAMRAVGVVEAT 282
Query: 272 PDTVFAVVLSSDKHKRYEWDMLTADLELVETIDGYYDVVYGTYEPRYLSWWKTKKDFVFS 331
+++F +++S D RYEWD LVE +DG+ ++Y + + S +D +
Sbjct: 283 CESIFGLIMSMDV-TRYEWDCSFQYGSLVEEVDGHTAILYHRLQLNWFSMLVWPRDLCYV 341
Query: 332 RQWFRGQDGAYTILQIPAC 350
R W R DG+Y L + C
Sbjct: 342 RYWRRNDDGSYGNLWMSPC 360
>Os10g0455900 Pleckstrin homology-type domain containing protein
Length = 315
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 24/259 (9%)
Query: 52 WVYHLGVNSIGHEYRHLRFLVIRGKTVAMYKRDPSKNPGIQPIRKGVVSHTLMVEELGRR 111
W+ G IG + H+R+ V+ + ++ YKR P PI+ + VE+ G +
Sbjct: 13 WMVRYGRRKIGRSFIHMRYFVLETRLLSYYKRKPQHKMPKLPIKSLHIDGNCRVEDRGLK 72
Query: 112 ITSHGELYVLRFYNRLDQTKKGEIACGDPGEARKWVEAFEQAKQQADYDLMTRGVSWNRS 171
+ LYVL YN+ ++ ++ +A + EA W E E Q + + G + S
Sbjct: 73 MHHGHMLYVLCVYNKREKHQRITMAAFNIQEALIWKEKIEMVIDQQQGVVASDG-NLAHS 131
Query: 172 QNENELNLDGHRP----------------RVRRYAQGLGKLVRIGKGPEKLLRQSSNLQS 215
++ +++L+ R + L + IG GP + L +
Sbjct: 132 SSQQKVSLENGRKSSFSDHESLYSHEEEEEEEDNQRSLMRRTTIGNGPPESLYDWTREND 191
Query: 216 HEIINTNFGGDSGDAFEAHEWRYVRTFNGIRIFEDIANT---XXXXXXXXXXXXXXXANP 272
I N G F WR VR NG+RIFE++ + A+
Sbjct: 192 LGISNQ---GSPDHVFSRRHWRLVRCQNGLRIFEELQDVDYLARSCSRAMKAVGVVEASC 248
Query: 273 DTVFAVVLSSDKHKRYEWD 291
+ +F +V+S D RYEWD
Sbjct: 249 EAIFQLVMSMDT-TRYEWD 266
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,137,101
Number of extensions: 987543
Number of successful extensions: 1865
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1852
Number of HSP's successfully gapped: 6
Length of query: 763
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 654
Effective length of database: 11,344,475
Effective search space: 7419286650
Effective search space used: 7419286650
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)