Os10g0455900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pleckstrin homology-type domain containing protein.
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Os10g0455900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pleckstrin homology-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.66 | 0.208 | 12.5 | -0.455 | 0.179 | 0.874 | 0.409 | -1.63 | 0.00448 | 2.42 | 0.4658 | 2080 | -- | -- |
| 20.15 | 0.209 | 12.5 | -0.52 | 0.191 | 0.42 | 0.449 | -- | 0.00655 | 2.28 | 1.124 | 2092 | -- | -- |
| 20.25 | 0.21 | 12.5 | -0.469 | 0.179 | 0.881 | -- | -1.71 | 0.00356 | 2.1 | 0.3683 | 2069 | -- | -- |
| 20.66 | 0.212 | 12.5 | -0.528 | 0.179 | 0.404 | -- | -- | 0.0133 | 2.13 | 0.5 | 2072 | -- | -- |
| 22.15 | 0.219 | 12.5 | -0.474 | -- | 0.873 | -- | -1.7 | 0.0087 | -- | 0.3929 | 1942 | -- | -- |
| 22.3 | 0.221 | 12.5 | -0.634 | 0.17 | -- | 0.381 | -- | 0.0391 | 2.68 | -- | -- | -- | -- |
| 22.79 | 0.224 | 12.5 | -0.643 | 0.17 | -- | -- | -- | 0.0371 | 2.28 | -- | -- | -- | -- |
| 22.52 | 0.221 | 12.5 | -0.529 | -- | 0.4 | -- | -- | 0.0197 | -- | 0.3782 | 1924 | -- | -- |
| 26.9 | 0.242 | 12.5 | -- | 0.169 | 0.656 | -- | -- | 0.0542 | 1.66 | 0.5 | 2086 | -- | -- |
| 24.51 | 0.231 | 12.5 | -0.636 | -- | -- | -- | -- | 0.0412 | -- | -- | -- | -- | -- |
| 33.7 | 0.272 | 12.5 | -- | 0.158 | -- | -- | -- | 0.109 | 2.2 | -- | -- | -- | -- |
| 28.74 | 0.25 | 12.5 | -- | -- | 0.647 | -- | -- | 0.0522 | -- | 0.3522 | 2080 | -- | -- |
| 35.19 | 0.277 | 12.5 | -- | -- | -- | -- | -- | 0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.91 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 2 | 18.93 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 3 | 18.95 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 5 | 18.99 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 28 | 19.22 | wind | 3.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 31 | 19.22 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 22 | 15 |
| 32 | 19.23 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 34 | 19.23 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 60 | 19.32 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 2 |
| 61 | 19.32 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 62 | 19.33 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 71 | 19.34 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 77 | 19.35 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 78 | 19.35 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 7 |
| 81 | 19.36 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 82 | 19.36 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 86 | 19.36 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 109 | 19.40 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 112 | 19.40 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 129 | 19.45 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 15 |
| 141 | 19.46 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 16 |
| 146 | 19.47 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 161 | 19.49 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 165 | 19.49 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 22 | 16 |
| 173 | 19.51 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 176 | 19.51 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 183 | 19.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 197 | 19.53 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 5 | NA |
| 211 | 19.54 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 217 | 19.55 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 222 | 19.55 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 6 |
| 232 | 19.56 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 5 | NA |
| 237 | 19.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 238 | 19.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 240 | 19.56 | precipitation | 0.1 | 1440 | > th | dose dependent | sin | 6 | NA |
| 241 | 19.56 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 5 | NA |
| 245 | 19.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 13 |
| 246 | 19.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 22 | 13 |
| 249 | 19.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 250 | 19.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 257 | 19.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 274 | 19.58 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 275 | 19.58 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 22 | 13 |
| 298 | 19.60 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 318 | 19.61 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 325 | 19.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 335 | 19.62 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 338 | 19.62 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 387 | 19.64 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 399 | 19.64 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 18 |
| 401 | 19.65 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 404 | 19.65 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 408 | 19.65 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 410 | 19.65 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 417 | 19.65 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 431 | 19.66 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 436 | 19.66 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 16 |
| 443 | 19.66 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 449 | 19.66 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 16 |
| 456 | 19.67 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 470 | 19.67 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 22 | 9 |
| 502 | 19.68 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 517 | 19.69 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 538 | 19.69 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 549 | 19.70 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 579 | 19.71 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 580 | 19.71 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 597 | 19.71 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 605 | 19.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 679 | 19.73 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 17 |
| 703 | 19.74 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 704 | 19.74 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 713 | 19.74 | wind | 3.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 765 | 19.75 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 0 | NA |
| 775 | 19.75 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 786 | 19.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 787 | 19.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 790 | 19.76 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 7 |
| 835 | 19.77 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 846 | 19.77 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 849 | 19.77 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 866 | 19.77 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 872 | 19.77 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 12 |
| 878 | 19.78 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 884 | 19.78 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 907 | 19.78 | wind | 3.0 | 43200 | < th | dose dependent | no | NA | NA |
| 908 | 19.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 909 | 19.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 910 | 19.78 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 914 | 19.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 916 | 19.78 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 928 | 19.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 958 | 19.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 6 |
| 999 | 19.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 1000 | 19.80 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 23 |