Os10g0479800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1336 domain containing protein.
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Os10g0479800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1336 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.31 | 0.602 | 3.54 | 0.602 | 0.438 | 1.08 | 0.17 | 1.06 | 0.295 | 5.42 | 27 | 63 | -- | -- |
| 165.83 | 0.6 | 3.52 | 0.769 | 0.439 | 1.01 | 0.424 | -- | 0.327 | 5.24 | 27.38 | 55 | -- | -- |
| 164.3 | 0.597 | 3.54 | 0.589 | 0.441 | 1.08 | -- | 1.12 | 0.292 | 5.46 | 27 | 53 | -- | -- |
| 166.28 | 0.601 | 3.52 | 0.774 | 0.443 | 1.03 | -- | -- | 0.331 | 5.4 | 27.4 | 54 | -- | -- |
| 172.54 | 0.612 | 3.55 | 0.637 | -- | 1.32 | -- | 1.18 | 0.314 | -- | 28.28 | 75 | -- | -- |
| 180.39 | 0.63 | 3.57 | 0.525 | 0.683 | -- | 0.558 | -- | 0.11 | 4.2 | -- | -- | -- | -- |
| 181.26 | 0.63 | 3.57 | 0.519 | 0.687 | -- | -- | -- | 0.107 | 4.22 | -- | -- | -- | -- |
| 174.07 | 0.614 | 3.52 | 0.857 | -- | 1.3 | -- | -- | 0.382 | -- | 28.7 | 84 | -- | -- |
| 180.41 | 0.629 | 3.55 | -- | 0.536 | 0.705 | -- | -- | 0.185 | 5.04 | 27.4 | 54 | -- | -- |
| 206.77 | 0.672 | 3.58 | 0.547 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 188.37 | 0.642 | 3.59 | -- | 0.697 | -- | -- | -- | 0.0494 | 4.21 | -- | -- | -- | -- |
| 191.89 | 0.645 | 3.55 | -- | -- | 1.04 | -- | -- | 0.243 | -- | 29.1 | 70 | -- | -- |
| 214.67 | 0.684 | 3.59 | -- | -- | -- | -- | -- | 0.0649 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.55 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 7 | 152.42 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 12 | 152.67 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 14 | 152.79 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 15 | 152.81 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 24 | 153.45 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 64 | 155.12 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 88 | 156.25 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 91 | 156.29 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 103 | 156.54 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 123 | 156.87 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 128 | 157.04 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 149 | 157.43 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 151 | 157.47 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 152 | 157.52 | temperature | 25.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 161 | 157.70 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 175 | 157.87 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 206 | 158.37 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 23 | 14 |
| 236 | 158.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 254 | 158.93 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 257 | 158.98 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 14 |
| 282 | 159.22 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 8 |
| 291 | 159.31 | temperature | 25.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 292 | 159.31 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 297 | 159.39 | temperature | 20.0 | 90 | < th | dose independent | rect. | 2 | 20 |
| 301 | 159.43 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 325 | 159.56 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 349 | 159.83 | temperature | 15.0 | 30 | > th | dose dependent | sin | 6 | NA |
| 355 | 159.88 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 453 | 160.80 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 489 | 161.07 | temperature | 25.0 | 30 | < th | dose independent | rect. | 5 | 15 |
| 502 | 161.17 | temperature | 25.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 563 | 161.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 15 |
| 611 | 161.80 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 11 |
| 628 | 161.84 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 9 |
| 632 | 161.85 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 633 | 161.86 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 653 | 161.95 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 691 | 162.11 | humidity | 90.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 778 | 162.44 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 792 | 162.49 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 800 | 162.55 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 875 | 162.89 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 23 |
| 877 | 162.89 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 913 | 163.04 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 919 | 163.06 | radiation | 1.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 922 | 163.08 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 949 | 163.21 | wind | 5.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 981 | 163.33 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 990 | 163.37 | temperature | 20.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 999 | 163.43 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 23 |