BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0345700 Os08g0345700|AK099939
(617 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0345700 Similar to Fructose-6-phosphate 1-phosphotrans... 1281 0.0
Os06g0326400 Pyrophosphate-dependent phosphofructokinase Pf... 880 0.0
Os02g0714200 Similar to Pyrophosphate--fructose 6-phosphate... 865 0.0
Os06g0247500 Similar to Pyrophosphate-fructose 6-phosphate ... 418 e-117
>Os08g0345700 Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment)
Length = 617
Score = 1281 bits (3314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/617 (100%), Positives = 617/617 (100%)
Query: 1 MNADFGAPKDLAGGLQQRRSLYQPTLPPCLQGATVKVEYGDATTTIDPTCANVVAQAFPR 60
MNADFGAPKDLAGGLQQRRSLYQPTLPPCLQGATVKVEYGDATTTIDPTCANVVAQAFPR
Sbjct: 1 MNADFGAPKDLAGGLQQRRSLYQPTLPPCLQGATVKVEYGDATTTIDPTCANVVAQAFPR 60
Query: 61 TYGQPLVSFVAPPPDAVDKDRAPIRVGVVFSGRQSPGGHNVIWGLHDALKAYNPHSVLYG 120
TYGQPLVSFVAPPPDAVDKDRAPIRVGVVFSGRQSPGGHNVIWGLHDALKAYNPHSVLYG
Sbjct: 61 TYGQPLVSFVAPPPDAVDKDRAPIRVGVVFSGRQSPGGHNVIWGLHDALKAYNPHSVLYG 120
Query: 121 FVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTCNNLNLDG 180
FVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTCNNLNLDG
Sbjct: 121 FVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTCNNLNLDG 180
Query: 181 LVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCKVNSQ 240
LVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCKVNSQ
Sbjct: 181 LVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCKVNSQ 240
Query: 241 LVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKLTLMEVIN 300
LVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKLTLMEVIN
Sbjct: 241 LVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKLTLMEVIN 300
Query: 301 KICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEINILHNNNVPVAEMPSQLSPWA 360
KICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEINILHNNNVPVAEMPSQLSPWA
Sbjct: 301 KICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEINILHNNNVPVAEMPSQLSPWA 360
Query: 361 AALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEGRYKGRKFSS 420
AALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEGRYKGRKFSS
Sbjct: 361 AALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEGRYKGRKFSS 420
Query: 421 VCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPVDKWRCAAAP 480
VCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPVDKWRCAAAP
Sbjct: 421 VCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPVDKWRCAAAP 480
Query: 481 LTAMMSVKRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDDFYRTPGGIQY 540
LTAMMSVKRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDDFYRTPGGIQY
Sbjct: 481 LTAMMSVKRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDDFYRTPGGIQY 540
Query: 541 EGPGCNAKPITLTIENQDYMGDIEILKDCLSKVRTMVKPGCSREVLKAAISSMLSVTDVL 600
EGPGCNAKPITLTIENQDYMGDIEILKDCLSKVRTMVKPGCSREVLKAAISSMLSVTDVL
Sbjct: 541 EGPGCNAKPITLTIENQDYMGDIEILKDCLSKVRTMVKPGCSREVLKAAISSMLSVTDVL 600
Query: 601 TVMSHPLNAELPLYHFN 617
TVMSHPLNAELPLYHFN
Sbjct: 601 TVMSHPLNAELPLYHFN 617
>Os06g0326400 Pyrophosphate-dependent phosphofructokinase PfpB family protein
Length = 622
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/610 (68%), Positives = 510/610 (83%), Gaps = 5/610 (0%)
Query: 1 MNADFGAPKDLAGGLQQRRSLYQPTLPPCLQGATVKVEYGDATTTIDPTCANVVAQAFPR 60
M++D+G P++L+ LQ+ R+LY+P LPPCLQG TVKVEYGDA D A+V++ AFP
Sbjct: 6 MDSDYGVPRELSA-LQKARALYRPDLPPCLQGTTVKVEYGDAAIAADVAGAHVISHAFPH 64
Query: 61 TYGQPLVSFV---APPPDAVDKDRAPI-RVGVVFSGRQSPGGHNVIWGLHDALKAYNPHS 116
TYGQPL F+ A PDA P+ RVGVVFSGRQSPGGHNVIWGLHDA+KA+N +S
Sbjct: 65 TYGQPLAHFLRKTAAVPDATVITEHPVVRVGVVFSGRQSPGGHNVIWGLHDAIKAHNANS 124
Query: 117 VLYGFVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTCNNL 176
L GF+GGT+GLFA KT+EI+D+VL+SYKNQGG+DLLGR+ DQIR+T+QVNAAMT C L
Sbjct: 125 KLIGFLGGTDGLFAQKTLEISDEVLSSYKNQGGYDLLGRTRDQIRTTEQVNAAMTACQAL 184
Query: 177 NLDGLVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCK 236
LD LVIIGGVTSN+DAAQLAE ++ C TKVVGVPV+LNGDLKNQFVETTVGFDT+CK
Sbjct: 185 KLDALVIIGGVTSNTDAAQLAETFAESKCSTKVVGVPVTLNGDLKNQFVETTVGFDTICK 244
Query: 237 VNSQLVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKLTLM 296
VNSQL+SNVC DA+SA KYYYFVRLMGRKASHVA ECALQSHPNM+IL EEVA SKLT+
Sbjct: 245 VNSQLISNVCTDALSAEKYYYFVRLMGRKASHVALECALQSHPNMVILGEEVAASKLTIF 304
Query: 297 EVINKICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEINILHNNNVPVAEMPSQL 356
++ +ICD VQARAE K HGV+LIPEGL+ESIPE+YALLQEI+ LH+ V V + S L
Sbjct: 305 DITKQICDAVQARAEKDKNHGVVLIPEGLVESIPELYALLQEIHGLHDKGVSVENISSHL 364
Query: 357 SPWAAALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEGRYKGR 416
SPWA+ALF+FLPPFIR++LLLH ESD+SAQLSQI+TE+LLA LVEAEM KR KEG YKG+
Sbjct: 365 SPWASALFEFLPPFIRKQLLLHPESDDSAQLSQIETEKLLAQLVEAEMNKRLKEGTYKGK 424
Query: 417 KFSSVCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPVDKWRC 476
KF+++CHFFGYQARG++PS FDCDYAY LG + H++AAGL GYMATV NL+ PV+KW+C
Sbjct: 425 KFNAICHFFGYQARGALPSKFDCDYAYVLGHVCYHILAAGLNGYMATVTNLRSPVNKWKC 484
Query: 477 AAAPLTAMMSVKRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDDFYRTPG 536
AAP+T+MM+VKR RGP A IGKPA+H + IDLKGK YELLR+ +SSFL++D YR PG
Sbjct: 485 GAAPITSMMTVKRWSRGPAASQIGKPAVHMASIDLKGKPYELLRQNSSSFLMEDIYRNPG 544
Query: 537 GIQYEGPGCNAKPITLTIENQDYMGDIEILKDCLSKVRTMVKPGCSREVLKAAISSMLSV 596
+Q+EGPG KPI+L +E++DYMG I+ L++ L KV+++VKPGCS++VLKAA+S+M SV
Sbjct: 545 PLQFEGPGGETKPISLCVEDRDYMGRIKQLQEYLEKVKSIVKPGCSQDVLKAALSAMASV 604
Query: 597 TDVLTVMSHP 606
T++LT+MS P
Sbjct: 605 TEMLTIMSSP 614
>Os02g0714200 Similar to Pyrophosphate--fructose 6-phosphate 1-phosphotransferase
alpha subunit (EC 2.7.1.90) (PFP)
(6-phosphofructokinase, pyrophosphate dependent)
(Pyrophosphate-dependent 6-phosphofructose-1-kinase)
(PPi-PFK)
Length = 617
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/608 (66%), Positives = 506/608 (83%), Gaps = 5/608 (0%)
Query: 1 MNADFGAPKDLAGGLQQRRSLYQPTLPPCLQGATVKVEYGDATTTIDPTCANVVAQAFPR 60
M++D+G P++L+ +Q++R+LYQP LPPCLQG TV+VEYGDA DP A+V++ AFP
Sbjct: 1 MDSDYGVPRELSE-VQKKRALYQPELPPCLQGTTVRVEYGDAAIAADPAGAHVISHAFPH 59
Query: 61 TYGQPLVSFV---APPPDAVDKDRAPI-RVGVVFSGRQSPGGHNVIWGLHDALKAYNPHS 116
TYGQPL F+ A PDA P+ RVGVVF GRQSPGGHNVIWGLH+A+KA+NP+S
Sbjct: 60 TYGQPLAHFLRKTANVPDATVISEHPVVRVGVVFCGRQSPGGHNVIWGLHEAIKAHNPNS 119
Query: 117 VLYGFVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTCNNL 176
L GF+GG++GL A KT+EITD+VL+SYKNQGG+D+LGR+ DQIR+T+QVN AM +C L
Sbjct: 120 KLIGFLGGSDGLLAQKTLEITDEVLSSYKNQGGYDMLGRTKDQIRTTEQVNGAMASCQAL 179
Query: 177 NLDGLVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDTVCK 236
LD LVIIGGVTSN+DAAQLAE + C TKVVGVPV+LNGDLKNQFVETTVGFDT+CK
Sbjct: 180 KLDALVIIGGVTSNTDAAQLAETFAEAKCATKVVGVPVTLNGDLKNQFVETTVGFDTICK 239
Query: 237 VNSQLVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKLTLM 296
VNSQL+SNVC DA+SA KYYYF+R+MGRKASHVA ECALQSHPNM+IL EEVA SKLT+
Sbjct: 240 VNSQLISNVCTDALSAEKYYYFIRMMGRKASHVALECALQSHPNMVILGEEVAASKLTIF 299
Query: 297 EVINKICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEINILHNNNVPVAEMPSQL 356
++ +ICD VQARAE K+HGV+LIPEGL+ESIPE+YALLQEI+ LH V + + SQL
Sbjct: 300 DITKQICDAVQARAEKDKYHGVVLIPEGLVESIPELYALLQEIHGLHGKGVSMENISSQL 359
Query: 357 SPWAAALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEGRYKGR 416
SPWA+ALF+FLPPFIR++LLLH ESD+SAQLSQI+TE+LLA LVE EM +R KEG YKG+
Sbjct: 360 SPWASALFEFLPPFIRKQLLLHPESDDSAQLSQIETEKLLAQLVEDEMNRRMKEGTYKGK 419
Query: 417 KFSSVCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPVDKWRC 476
KF+++CHFFGYQARGS+PS FDCDYAY LG + H++AAGL GYMATV NLK P +KWRC
Sbjct: 420 KFNAICHFFGYQARGSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATVTNLKSPANKWRC 479
Query: 477 AAAPLTAMMSVKRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDDFYRTPG 536
AAP+++MM+VKR RGP A IGKPA+H + +DLKGKA+ELLR ++SFL+DD YR PG
Sbjct: 480 GAAPISSMMTVKRWSRGPAATQIGKPAVHMATVDLKGKAFELLRNNSTSFLIDDIYRNPG 539
Query: 537 GIQYEGPGCNAKPITLTIENQDYMGDIEILKDCLSKVRTMVKPGCSREVLKAAISSMLSV 596
+Q+EG G ++KPI+L +E+QDYMG I+ L++ L KV+++VKPGCS++VLKAA+S+M SV
Sbjct: 540 PLQFEGAGADSKPISLCVEDQDYMGRIKKLQEYLEKVKSIVKPGCSQDVLKAALSAMSSV 599
Query: 597 TDVLTVMS 604
T+ L +M+
Sbjct: 600 TETLAIMT 607
>Os06g0247500 Similar to Pyrophosphate-fructose 6-phosphate 1-phosphotransferase
(EC 2.7.1.90) (Fragment)
Length = 567
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/505 (43%), Positives = 312/505 (61%), Gaps = 14/505 (2%)
Query: 54 VAQAFPRTYGQPLVSFVAPPPDAVDKDRAPIRVGVVFSGRQSPGGHNVIWGLHDALKAYN 113
+A+ FP +GQP VS V P A + P++VGVV SG Q+PGGHNVI G+ D L+ Y
Sbjct: 69 IAKLFPNLFGQPSVSLVPSPEPASTR---PLKVGVVLSGGQAPGGHNVICGIFDYLQEYA 125
Query: 114 PHSVLYGFVGGTEGLFANKTIEITDDVLASYKNQGGFDLLGRSIDQIRSTKQVNAAMTTC 173
SV+YGF GG G+ K +E+T D + Y+NQGGFD++ D+I + +Q A T
Sbjct: 126 KGSVMYGFKGGPAGVMKCKYVELTADYVYPYRNQGGFDMICSGRDKIETPEQFKQAEDTV 185
Query: 174 NNLNLDGLVIIGGVTSNSDAAQLAEALVQNNCKTKVVGVPVSLNGDLKNQFVETTVGFDT 233
N L+LDGLV+IGG SN++A LAE N KT+V+G P +++GDLK + V T+ GFDT
Sbjct: 186 NKLDLDGLVVIGGDDSNTNACLLAEYFRGKNMKTRVIGCPKTIDGDLKCKEVPTSFGFDT 245
Query: 234 VCKVNSQLVSNVCLDAISAGKYYYFVRLMGRKASHVAFECALQSHPNMLILAEEVALSKL 293
CK+ S+++ NV DA S GKYY+FVRLMGR ASH+ ECALQ+HPN+ ++ EEVA K
Sbjct: 246 ACKIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAAKKE 305
Query: 294 TLMEVINKICDGVQARAELGKFHGVLLIPEGLIESIPEMYALLQEIN--ILHNNNVPVAE 351
TL V + I D V RAELG +GV+LIPEGLI+ IPE+ L+ E+N + H+
Sbjct: 306 TLKSVTDYITDIVCKRAELGYNYGVILIPEGLIDFIPEVQKLIAELNEILAHDVVDEAGA 365
Query: 352 MPSQLSPWAAALFQFLPPFIRRELLLHQESDNSAQLSQIDTEQLLAHLVEAEMIKRTKEG 411
S+L P + LF FLP I+ +LLL ++ + Q+++I+TE++L +VE E+ KR EG
Sbjct: 366 WKSKLQPESRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRKAEG 425
Query: 412 RYKGRKFSSVCHFFGYQARGSVPSNFDCDYAYALGRISLHMIAAGLTGYMATVANLKDPV 471
+Y F HFFGY+ R +P+ FD +Y YALG S ++ G TG + +V NL PV
Sbjct: 426 KYPAH-FRGQSHFFGYEGRCGLPTIFDSNYCYALGYGSGALLQCGKTGLITSVGNLAAPV 484
Query: 472 DKWRCAAAPLTAMMSV-KRHLRGPGAIPIGKPAIHPSPIDLKGKAYELLREKASSFLLDD 530
++W LT++M V +RH + KP I + ++L G ++ + L +
Sbjct: 485 EEWTVGGTALTSLMDVERRHGK-------YKPVIKKAMVELDGAPFKKFASLRDEWSLKN 537
Query: 531 FYRTPGGIQYEGPGCNAKPITLTIE 555
Y +PG IQ+ GPG N TL +E
Sbjct: 538 HYISPGPIQFSGPGSNDANHTLMLE 562
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,145,181
Number of extensions: 910851
Number of successful extensions: 2069
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2067
Number of HSP's successfully gapped: 5
Length of query: 617
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 510
Effective length of database: 11,448,903
Effective search space: 5838940530
Effective search space used: 5838940530
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)