Os08g0345700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os08g0345700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Fructose-6-phosphate 1-phosphotransferase (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.71 | 0.464 | 11 | -0.106 | 4.14 | 5.26 | 5.06 | 3.07 | 0.511 | 18.8 | 1.19 | 726 | -- | -- |
| 103.41 | 0.474 | 11 | 0.00952 | 4.55 | 5.79 | 3.18 | -- | 0.579 | 18.8 | 1.704 | 735 | -- | -- |
| 114.13 | 0.498 | 10.9 | -0.00162 | 4.6 | 6.09 | -- | -2.13 | 0.515 | 19.1 | 1.673 | 773 | -- | -- |
| 121.35 | 0.513 | 10.9 | -0.215 | 4.27 | 5.67 | -- | -- | 0.558 | 19.3 | 1.666 | 789 | -- | -- |
| 135.51 | 0.542 | 10.8 | 0.0302 | -- | 2.7 | -- | -1.59 | 0.789 | -- | 2.709 | 3130 | -- | -- |
| 146.82 | 0.568 | 10.9 | -0.491 | 1.19 | -- | 0.324 | -- | 0.347 | 0.39 | -- | -- | -- | -- |
| 147.22 | 0.568 | 10.9 | -0.504 | 1.19 | -- | -- | -- | 0.345 | 0.492 | -- | -- | -- | -- |
| 131.35 | 0.534 | 10.8 | -0.085 | -- | 2.78 | -- | -- | 0.755 | -- | 2.404 | 3118 | -- | -- |
| 117.92 | 0.506 | 10.9 | -- | 3.53 | 4.58 | -- | -- | 0.537 | 19.3 | 1.35 | 770 | -- | -- |
| 235.45 | 0.717 | 10.9 | -0.463 | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
| 153.92 | 0.58 | 10.9 | -- | 1.18 | -- | -- | -- | 0.401 | 0.471 | -- | -- | -- | -- |
| 117.6 | 0.505 | 10.8 | -- | -- | 3.03 | -- | -- | 0.599 | -- | 1.827 | 1610 | -- | -- |
| 241.1 | 0.725 | 10.9 | -- | -- | -- | -- | -- | 0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.73 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 15 |
| 2 | 92.75 | radiation | 1.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 5 | 94.07 | radiation | 1.0 | 720 | < th | dose independent | sin | 13 | NA |
| 7 | 94.33 | radiation | 1.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 8 | 94.60 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 10 | 94.94 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 18 |
| 16 | 95.39 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 22 |
| 21 | 95.69 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 16 |
| 22 | 95.74 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 2 |
| 28 | 95.96 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 17 |
| 42 | 96.70 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 51 | 96.93 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 14 |
| 58 | 97.12 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 20 |
| 82 | 97.45 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 23 |
| 92 | 97.81 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 7 |
| 96 | 97.92 | radiation | 1.0 | 720 | < th | dose independent | sin | 22 | NA |
| 115 | 98.16 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 21 |
| 117 | 98.18 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 23 |
| 122 | 98.27 | radiation | 1.0 | 720 | < th | dose dependent | no | NA | NA |
| 148 | 98.82 | radiation | 1.0 | 720 | > th | dose independent | rect. | 10 | 23 |
| 149 | 98.83 | radiation | 1.0 | 720 | > th | dose independent | rect. | 16 | 23 |
| 153 | 98.96 | radiation | 1.0 | 720 | > th | dose independent | no | NA | NA |
| 154 | 98.96 | radiation | 1.0 | 720 | > th | dose independent | rect. | 5 | 14 |
| 223 | 99.20 | radiation | 1.0 | 720 | < th | dose independent | no | NA | NA |
| 237 | 99.68 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 238 | 99.78 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 6 |
| 245 | 99.86 | radiation | 1.0 | 720 | < th | dose independent | rect. | 22 | 23 |
| 246 | 99.89 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 274 | 100.67 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 278 | 100.74 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 20 |
| 291 | 101.06 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 17 |
| 293 | 101.08 | radiation | 1.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 298 | 101.20 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 309 | 101.49 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 23 |
| 320 | 101.86 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 13 |
| 332 | 102.12 | radiation | 1.0 | 720 | > th | dose independent | sin | 0 | NA |
| 335 | 102.19 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 13 |
| 343 | 102.34 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 379 | 102.97 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 23 |
| 380 | 102.98 | radiation | 1.0 | 720 | > th | dose independent | sin | 11 | NA |
| 456 | 104.39 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 519 | 105.63 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 13 |
| 536 | 105.82 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 537 | 105.83 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 11 |
| 630 | 107.16 | humidity | 50.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 641 | 107.30 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 15 | 15 |
| 650 | 107.41 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 672 | 107.60 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 685 | 107.69 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 19 |
| 691 | 107.73 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 18 | 5 |
| 805 | 108.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 23 |
| 809 | 108.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 879 | 108.46 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 917 | 108.73 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 955 | 108.94 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 967 | 109.01 | temperature | 30.0 | 720 | < th | dose independent | sin | 14 | NA |
| 970 | 109.02 | humidity | 70.0 | 720 | > th | dose independent | sin | 14 | NA |