BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0166100 Os08g0166100|Os08g0166100
(294 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0166100 487 e-138
Os08g0163900 Protein of unknown function DUF569 family protein 319 1e-87
Os08g0164400 134 5e-32
Os08g0164000 Protein of unknown function DUF569 family protein 134 6e-32
Os10g0358900 127 1e-29
Os08g0164732 101 5e-22
Os08g0164300 Protein of unknown function DUF569 family protein 97 1e-20
Os08g0164200 Protein of unknown function DUF569 family protein 90 2e-18
>Os08g0166100
Length = 294
Score = 487 bits (1253), Expect = e-138, Method: Compositional matrix adjust.
Identities = 250/294 (85%), Positives = 250/294 (85%)
Query: 1 MASRRGTSRGHRVGMEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGGASQHNAVW 60
MASRRGTSRGHRVGMEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGGASQHNAVW
Sbjct: 1 MASRRGTSRGHRVGMEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGGASQHNAVW 60
Query: 61 AXXXXXXXXXXXXXXXXAPVRYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDVRQ 120
A APVRYLLLRSAYGRYLGAT SDVRQ
Sbjct: 61 AVEEFLVEGEDEEVEEEAPVRYLLLRSAYGRYLGATDAAPFEAARNAAARDAAANSDVRQ 120
Query: 121 PHAREXXXXXXXXXRLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVV 180
PHARE RLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVV
Sbjct: 121 PHAREGCCGCCCCCRLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVV 180
Query: 181 LLRDRSGRYLRCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSGDMPELPIATQREVG 240
LLRDRSGRYLRCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSGDMPELPIATQREVG
Sbjct: 181 LLRDRSGRYLRCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSGDMPELPIATQREVG 240
Query: 241 EAPEREDREACGLRRLHDVRQRRPPWAVHPSAHRPSSPPGDPADRPCQAQHRII 294
EAPEREDREACGLRRLHDVRQRRPPWAVHPSAHRPSSPPGDPADRPCQAQHRII
Sbjct: 241 EAPEREDREACGLRRLHDVRQRRPPWAVHPSAHRPSSPPGDPADRPCQAQHRII 294
>Os08g0163900 Protein of unknown function DUF569 family protein
Length = 345
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/226 (74%), Positives = 171/226 (75%), Gaps = 4/226 (1%)
Query: 15 MEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGGASQHNAVWAXXXXXXXXX---X 71
MEVFDDV FARLRSH+YGSYLHADEDGRSVYHGSLRGGASQHNAVWA
Sbjct: 1 MEVFDDVVFARLRSHVYGSYLHADEDGRSVYHGSLRGGASQHNAVWAVEELLVPALPWRS 60
Query: 72 XXXXXXAPVRYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDVRQPHAREXXXXXX 131
A RYLLLRSAYGRYLGAT SDVRQPH RE
Sbjct: 61 SAEEEEAATRYLLLRSAYGRYLGATDAAPGEAARNATARAAAASSDVRQPHDREGCCGCC 120
Query: 132 XXX-RLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVVLLRDRSGRYL 190
RLPFGLVEATQRDRDEEEP VDAIMWLATRCG +DVQEDRDARGVVLLRDRSGRYL
Sbjct: 121 CCCCRLPFGLVEATQRDRDEEEPEVDAIMWLATRCGDQDVQEDRDARGVVLLRDRSGRYL 180
Query: 191 RCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSGDMPELPIATQ 236
RCNKSILACRRSISVDANFEDEDTLLWEVVRVPPS DMPELPIATQ
Sbjct: 181 RCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSEDMPELPIATQ 226
>Os08g0164400
Length = 353
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 118/226 (52%), Gaps = 51/226 (22%)
Query: 15 MEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGGASQ---HNAVWAXXXXXXXXXX 71
MEVF V F LR SYLHADE+GRSVYHG+LRGG+ HNAVWA
Sbjct: 1 MEVFQGVEFVALRVWCCNSYLHADENGRSVYHGNLRGGSGGGSLHNAVWAVEEVVAGV-- 58
Query: 72 XXXXXXAPVRYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDVRQPHAREXXXXXX 131
P RY+LLR AYGRYLG+ P A +
Sbjct: 59 ------PPTRYVLLRGAYGRYLGS-------------------------PDAPDREREGC 87
Query: 132 XXXRLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARG-VVLLRDRSGRYL 190
+EA QRDRD + V AIMW A C D+ ARG VVLL D+SGRYL
Sbjct: 88 CS-------LEAAQRDRDVLD--VGAIMWRAVGCSGPDL-----ARGCVVLLHDKSGRYL 133
Query: 191 RCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSGDMPELPIATQ 236
R N++ LA R +SV ++ ++E +L WEVVRV PS PELPIAT+
Sbjct: 134 RGNQTFLARRPGVSVHSDVDNETSLRWEVVRVTPSQVRPELPIATE 179
>Os08g0164000 Protein of unknown function DUF569 family protein
Length = 546
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 111/227 (48%), Gaps = 46/227 (20%)
Query: 13 VGMEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSL--RGGASQHNAVWAXXXXXXXXX 70
+ E + + LR GSYLHADEDGRSVY GSL GG S+H +WA
Sbjct: 135 IKTESINKLTEEALRIWKSGSYLHADEDGRSVYIGSLPRAGGDSRHGTMWAVEPPIDAA- 193
Query: 71 XXXXXXXAPV-RYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDVRQPHAREXXXX 129
AP+ +Y LR+AYGRYLG
Sbjct: 194 -------APLPQYARLRAAYGRYLGTPDSYGSP--------------------------- 219
Query: 130 XXXXXRLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVVLLRDRSGRY 189
LPF V+A QRDRD E +DAIMW C DV RDARGVVLLRDR GRY
Sbjct: 220 ------LPFLPVDAAQRDRDRVE--MDAIMWQPVACSGSDVVGGRDARGVVLLRDRYGRY 271
Query: 190 LRCNKSILACRRSISVDANFEDEDTLLWEVVRVPPSGDMPELPIATQ 236
LR + ++LA RRS+ V +E WEVVRVP S PELPIA Q
Sbjct: 272 LRGSNNLLAPRRSVPVKPYVVNEHMFRWEVVRVPLSEARPELPIAAQ 318
>Os10g0358900
Length = 537
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 112/228 (49%), Gaps = 48/228 (21%)
Query: 15 MEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGG-ASQHNAVWAXXXXXXXXXXXX 73
MEVF V FA LR GS+LHADEDGRSVYHGS+R G A NAVWA
Sbjct: 1 MEVFRGVEFAALRLWPCGSFLHADEDGRSVYHGSVRDGDAWLPNAVWAVEELVAGA---- 56
Query: 74 XXXXAPVRYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDVRQPHAR----EXXXX 129
+ RY+LLR AYGRYLGA P AR E
Sbjct: 57 ----SHTRYVLLRGAYGRYLGAGA-----------------------PDARDRDQERCAC 89
Query: 130 XXXXXRLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVVLLRDRSGRY 189
LP ++A QRDRD+ EP D IMW C D+ A VVLL+DRSGRY
Sbjct: 90 PLPSCPLPCCSLQAAQRDRDDAEP--DDIMWRPIGCSGTDI-----AGSVVLLQDRSGRY 142
Query: 190 LRCNKSILACRRSISVDANFEDEDTLLWEVVRV-----PPSGDMPELP 232
LR N+ L+ +SVD N +E TL WEVVRV P +P LP
Sbjct: 143 LRGNQGFLSRHHGVSVDVNIGNEMTLRWEVVRVRVPTRPERPIVPHLP 190
>Os08g0164732
Length = 278
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 88/186 (47%), Gaps = 49/186 (26%)
Query: 15 MEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSL---RGGASQHNAVWAXXXXXXXXXX 71
MEVF +V FA LR GSYLHADEDGRSVY GSL GG S+H AVWA
Sbjct: 14 MEVFQEVEFAALRIWKSGSYLHADEDGRSVYVGSLPRDGGGDSRHCAVWA--------VE 65
Query: 72 XXXXXXAPV-RYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDVRQPHAREXXXXX 130
AP+ +Y+ LR AYGRYLGA
Sbjct: 66 PPIDAAAPLPQYVRLRGAYGRYLGAPDSYGSP---------------------------- 97
Query: 131 XXXXRLPFGLVEATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVVLLRDRSGRYL 190
LPF V+A QRDRD E +DAI+W C DV RDARGVVLLRDR
Sbjct: 98 -----LPFLSVDAAQRDRDRVE--MDAIIWQPVACSGSDVVGGRDARGVVLLRDR--EMT 148
Query: 191 RCNKSI 196
RC +
Sbjct: 149 RCGARV 154
>Os08g0164300 Protein of unknown function DUF569 family protein
Length = 335
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 109/250 (43%), Gaps = 61/250 (24%)
Query: 1 MASRRGTSRGH--RVGMEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGGASQHNA 58
+A+ R + H R M+VF F RLR+ +Y+ ADEDGRSVYH G H A
Sbjct: 37 LAAARASPAHHPRRAAMQVFHGAQFVRLRNLWEETYITADEDGRSVYHYD-PGRRPSHEA 95
Query: 59 VWAXXXXXXXXXXXXXXXXAPVRYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDV 118
+WA P +Y+LLR AYGRYLGA
Sbjct: 96 IWA--------VQLAVAGEPPTQYVLLRGAYGRYLGA----------------------- 124
Query: 119 RQPHAREXXXXXXXXXRLPFGLV--EATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDA 176
P A E R P RD ++P VDAIMW A R
Sbjct: 125 --PDAVE--------RRWPLSCCCPAPVVGQRDFDQPVVDAIMWRAVRRTGH-------- 166
Query: 177 RGVVLLRDRSGRYLRCN-KSILAC--RRSISV-DANF-EDEDTLLWEVVRVPPSGDMPEL 231
VV L D+SGRYLR S L C R S++V D +DE L WEV V PS PEL
Sbjct: 167 --VVCLHDKSGRYLRGKLMSTLVCGGRPSLTVGDGRLSDDEKELRWEVRPVLPSPGRPEL 224
Query: 232 PIATQREVGE 241
PIAT+ ++ E
Sbjct: 225 PIATEADLAE 234
>Os08g0164200 Protein of unknown function DUF569 family protein
Length = 183
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 96/230 (41%), Gaps = 57/230 (24%)
Query: 15 MEVFDDVAFARLRSHMYGSYLHADEDGRSVYHGSLRGGASQHNAVWAXXXXXXXXXXXXX 74
MEVF V FARLR+ +Y+ ADEDGRSVYH + H A+WA
Sbjct: 1 MEVFQGVQFARLRNWWEETYVTADEDGRSVYHYAPDRHRPAHEAIWA--------VQMVL 52
Query: 75 XXXAPVRYLLLRSAYGRYLGATXXXXXXXXXXXXXXXXXXXSDVRQPHAREXXXXXXXXX 134
P +Y+LLR AYGRYLGA P A
Sbjct: 53 AGAPPTQYVLLRGAYGRYLGA-------------------------PDA--------VVR 79
Query: 135 RLPFGLV--EATQRDRDEEEPAVDAIMWLATRCGSEDVQEDRDARGVVLLRDRSGRYLRC 192
R P RD ++P VDAIMW A R A V+ L D+SGRYLR
Sbjct: 80 RWPLSCCWPAPVVGQRDFDQPEVDAIMWRAV----------RRADHVLCLHDKSGRYLRG 129
Query: 193 NKSILAC----RRSISVDANFEDEDTLLWEVVRVPPSGDMPELPIATQRE 238
L R ++ +DE L WEV+ V P+ PELPI+ E
Sbjct: 130 KLGTLVLGDRPRLTVGDGRLNDDEKALRWEVLPVLPNPGRPELPISIVPE 179
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,405,052
Number of extensions: 455044
Number of successful extensions: 1468
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1454
Number of HSP's successfully gapped: 10
Length of query: 294
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 194
Effective length of database: 11,814,401
Effective search space: 2291993794
Effective search space used: 2291993794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)