BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0162100 Os08g0162100|AK111830
(1133 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0162100 Similar to CTV.2 2324 0.0
Os03g0254700 Lissencephaly type-1-like homology motif domai... 1574 0.0
Os01g0254100 Similar to CTV.2 1429 0.0
Os05g0240200 Similar to CTV.2 538 e-152
>Os08g0162100 Similar to CTV.2
Length = 1133
Score = 2324 bits (6022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1117/1133 (98%), Positives = 1117/1133 (98%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGF 60
Query: 61 TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120
TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT
Sbjct: 61 TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120
Query: 121 LENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVSRLRTLINQSLN 180
LENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVSRLRTLINQSLN
Sbjct: 121 LENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFTDHSCXXXXXXXXXXXXXXXXLVGPIPKSAAFPPMGAHAPF 240
WQHQLCKNPRPNPDIKTLFTDHSC LVGPIPKSAAFPPMGAHAPF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFTDHSCAAPTNGARAPPPANGPLVGPIPKSAAFPPMGAHAPF 240
Query: 241 QPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQPPNTAAFLKHPRTPTSAPAIDYQS 300
QPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQPPNTAAFLKHPRTPTSAPAIDYQS
Sbjct: 241 QPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQPPNTAAFLKHPRTPTSAPAIDYQS 300
Query: 301 ADSEHLMKRMRVGQPDEVSFSGASHPANIYTQDDLPKQVVRNLNQGSNVMSLDFHPVQQT 360
ADSEHLMKRMRVGQPDEVSFSGASHPANIYTQDDLPKQVVRNLNQGSNVMSLDFHPVQQT
Sbjct: 301 ADSEHLMKRMRVGQPDEVSFSGASHPANIYTQDDLPKQVVRNLNQGSNVMSLDFHPVQQT 360
Query: 361 ILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLPLQAALMKDAAISVNRCLWSPDG 420
ILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLPLQAALMKDAAISVNRCLWSPDG
Sbjct: 361 ILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLPLQAALMKDAAISVNRCLWSPDG 420
Query: 421 SILGVAFSKHIVQTYAFVLNGELRQQAEIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIK 480
SILGVAFSKHIVQTYAFVLNGELRQQAEIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIK
Sbjct: 421 SILGVAFSKHIVQTYAFVLNGELRQQAEIDAHIGGVNDIAFSHPNKTLSIITCGDDKLIK 480
Query: 481 VWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAP 540
VWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAP
Sbjct: 481 VWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGSRVDYDAP 540
Query: 541 GHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTR 600
GHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTR
Sbjct: 541 GHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGVVQFDTTR 600
Query: 601 NRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAVTANENGIKILA 660
NRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAVTANENGIKILA
Sbjct: 601 NRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAVTANENGIKILA 660
Query: 661 NTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERPDRALPTV 720
NTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERPDRALPTV
Sbjct: 661 NTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERPDRALPTV 720
Query: 721 SMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVRLL 780
SMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVRLL
Sbjct: 721 SMSGLAPMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVRLL 780
Query: 781 YTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPE 840
YTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPE
Sbjct: 781 YTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPE 840
Query: 841 EATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIG 900
EATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIG
Sbjct: 841 EATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIG 900
Query: 901 MEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQLCAWSIDGWEKKK 960
MEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQLCAWSIDGWEKKK
Sbjct: 901 MEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQLCAWSIDGWEKKK 960
Query: 961 SRYIQSPANRSGALVGDTRVQFHNDQTHILVVHESQLAIYDAKLECLRSWSPREALPAPI 1020
SRYIQSPANRSGALVGDTRVQFHNDQTHILVVHESQLAIYDAKLECLRSWSPREALPAPI
Sbjct: 961 SRYIQSPANRSGALVGDTRVQFHNDQTHILVVHESQLAIYDAKLECLRSWSPREALPAPI 1020
Query: 1021 SSAIYSCDGLLIYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSMSSGGSVYPMVVAAHP 1080
SSAIYSCDGLLIYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSMSSGGSVYPMVVAAHP
Sbjct: 1021 SSAIYSCDGLLIYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSMSSGGSVYPMVVAAHP 1080
Query: 1081 LEPNQIAVGMSDGAVHVVEPLDSDPKWGVAPPQDNGTHPTISAAPAAANKPEV 1133
LEPNQIAVGMSDGAVHVVEPLDSDPKWGVAPPQDNGTHPTISAAPAAANKPEV
Sbjct: 1081 LEPNQIAVGMSDGAVHVVEPLDSDPKWGVAPPQDNGTHPTISAAPAAANKPEV 1133
>Os03g0254700 Lissencephaly type-1-like homology motif domain containing protein
Length = 1133
Score = 1574 bits (4075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 768/1146 (67%), Positives = 917/1146 (80%), Gaps = 28/1146 (2%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKETVHKLEQES FYFNMK+FED V G WDEVE+YL GF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFYFNMKYFEDEVINGNWDEVERYLGGF 60
Query: 61 TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120
TKV+DNRYSMKIFFEIRKQKYLEALD+HDR+KAVEILVKDLKVFASFNEELFKEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFASFNEELFKEITQLLT 120
Query: 121 LENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVSRLRTLINQSLN 180
LENFR+NEQLSKYGDTKSAR IML+ELKKLIEANPLFRDKL FP K SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKSSRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFTDHSCXXXXXXXXXXXXXXXXLVGPIPKSAAFPPMGAHAPF 240
WQHQLCKNPRPNPDIKTLF DHSC L+G IPK FPP+GAHAPF
Sbjct: 181 WQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANNP-LLGSIPKPGGFPPLGAHAPF 239
Query: 241 QPVVSPSPNAIAGWMTNANPSLPHAAVAQGPPGLVQPPNTAAFLKHPRTPTSA-PAIDYQ 299
QP +P P +AGWM+N P++ H AV+ G G P N AA LKHPRTPT+A P++DY
Sbjct: 240 QPAPTPVP-PLAGWMSNP-PAVTHPAVSGGAIGFGTPTNPAAILKHPRTPTTANPSMDYP 297
Query: 300 SADSEHLMKRMR-VGQPDEVSFSGASHP-----ANIYTQDDLPKQVVRNLNQGSNVMSLD 353
S DS+H+ KR R VG +EV+ P ++ Y QDD K V R L+QGS MS+D
Sbjct: 298 SGDSDHVSKRTRPVGMSEEVNLPVNMLPVTYPQSHSYPQDDFHKNVARTLSQGSTPMSMD 357
Query: 354 FHPVQQTILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLPLQAALMKDAAISVNR 413
FHPVQQT+LLVGTNVGDIG+W+VG++ER+ + FKVWD++ C++ LQA+L+KD +SVNR
Sbjct: 358 FHPVQQTLLLVGTNVGDIGLWDVGTKERLVLRNFKVWDLTKCSMALQASLVKDPTVSVNR 417
Query: 414 CLWSPDGSILGVAFSKHIVQTYAFVLNGELRQQAEIDAHIGGVNDIAFSHPNKTLSIITC 473
+WSPDG++ GVA+S+HIVQ Y++ ++RQ EIDAH+GGVNDIAF+HPNK L IITC
Sbjct: 418 IIWSPDGTLFGVAYSRHIVQIYSYHGGDDIRQHLEIDAHVGGVNDIAFAHPNKQLCIITC 477
Query: 474 GDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCLGS 533
GDDK IKVW+A +G KQ+TFEGHEAPVYSVCPHYKE+IQFIFSTA+DGKIKAWLYD LGS
Sbjct: 478 GDDKTIKVWEATSGAKQFTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGS 537
Query: 534 RVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRSLGV 593
RVDYDAPGHWCTTMAYSADG+RLFSCGTSKDG+SHLVEWNE+EGA+KRTY GFRKRS+GV
Sbjct: 538 RVDYDAPGHWCTTMAYSADGSRLFSCGTSKDGESHLVEWNESEGAVKRTYQGFRKRSMGV 597
Query: 594 VQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAVTANE 653
VQFDTTRNRFLAAGDEF++K WDMDNT++LTT D DGGLPASPR+RFN+EG+LLAV+ +E
Sbjct: 598 VQFDTTRNRFLAAGDEFLIKIWDMDNTSLLTTIDADGGLPASPRVRFNKEGTLLAVSTHE 657
Query: 654 NGIKILANTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVSNVSSPMAVNSERP 713
NGIKILAN DG RLLR LE+R+++ SR + + P++N L + + ++ A
Sbjct: 658 NGIKILANADGVRLLRTLENRSFDASRSASETVTK--PLMNPLTAAAAAAASAAAAGTSS 715
Query: 714 DRALP--TVSMSGLAPMDVSRTPDVKPRITDES-EKVKTWKLADIGDSGHLRALRMPDTS 770
A P +++G D DVKPRI DE +K K WKL +I +S R+L++ D
Sbjct: 716 GNAAPPAITALNG----DSRSLVDVKPRIADEPLDKSKVWKLMEITESSQCRSLKLTDNM 771
Query: 771 ATSSKVVRLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILM 830
T SK+ RL+YTN+GVA+LAL SNAVH LWKW R DRN +GK+TAS +PQ+WQP +GILM
Sbjct: 772 RT-SKISRLIYTNSGVAILALASNAVHLLWKWPRNDRNSSGKATASVSPQLWQPPSGILM 830
Query: 831 ANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFH 890
ND +D NPEEA C ALSKNDSYVMSASGGK+SLFNMMTFK MTTFM PPPAATFLAFH
Sbjct: 831 TNDITD-NPEEAVHCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFH 889
Query: 891 PQDNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQLCA 950
PQDNNIIAIGM+DSTIQIYNVR+DEVKSKL+GHSKKITGLAFS +N+LVSSGADAQ+C
Sbjct: 890 PQDNNIIAIGMDDSTIQIYNVRIDEVKSKLRGHSKKITGLAFSNVLNVLVSSGADAQICV 949
Query: 951 WSIDGWEKKKSRYIQSPANRSGALVGDTRVQFHNDQTHILVVHESQLAIYD-AKLECLRS 1009
WS DGW+K KSR +Q P++R +++ DTRVQFH DQ H LVVHE+Q+AIY+ KLE ++
Sbjct: 950 WSTDGWDKLKSRMLQIPSSRPSSIILDTRVQFHQDQLHFLVVHETQIAIYETTKLEPVKQ 1009
Query: 1010 WSPREALPAPISSAIYSCDGLLIYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSMSSGG 1069
W RE +PI+ A++SCD LIYA F D + +F A SLRL+CRI P++Y+P ++SS
Sbjct: 1010 WPVREN-SSPITHAMFSCDSQLIYASFLDATVCIFNASSLRLQCRILPASYLPQNISS-- 1066
Query: 1070 SVYPMVVAAHPLEPNQIAVGMSDGAVHVVEPLDSDPKWGVAPPQDNGTHPTISAAP---A 1126
+VYP+VVAAHP E NQ A+G++DG V+V+EPL+S+ KWG PP +NG+ +S P +
Sbjct: 1067 NVYPVVVAAHPSEANQFALGLTDGGVYVLEPLESERKWGNPPPAENGSTSALSTPPNGAS 1126
Query: 1127 AANKPE 1132
++++PE
Sbjct: 1127 SSDQPE 1132
>Os01g0254100 Similar to CTV.2
Length = 1129
Score = 1429 bits (3699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/1146 (62%), Positives = 877/1146 (76%), Gaps = 39/1146 (3%)
Query: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESAFYFNMKHFEDLVQGGEWDEVEKYLSGF 60
MSSLSRELVFLILQFLDEEKFKETVHKLEQES F+FNMK+FE+ V GEWDEVEKYLSGF
Sbjct: 1 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEKVHAGEWDEVEKYLSGF 60
Query: 61 TKVEDNRYSMKIFFEIRKQKYLEALDRHDRAKAVEILVKDLKVFASFNEELFKEITQLLT 120
TKV+DNRYSMKIFFEIRKQKYLEALDRHDRAKAV+ILVKDLKVF++FNEEL+KEITQLLT
Sbjct: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLKVFSTFNEELYKEITQLLT 120
Query: 121 LENFRQNEQLSKYGDTKSARNIMLMELKKLIEANPLFRDKLNFPPFKVSRLRTLINQSLN 180
LENFR+NEQLSKYGDTKSAR+IML+ELKKLIEANPLFR+KL FP K SRLRTLINQSLN
Sbjct: 121 LENFRENEQLSKYGDTKSARSIMLIELKKLIEANPLFREKLVFPTLKASRLRTLINQSLN 180
Query: 181 WQHQLCKNPRPNPDIKTLFTDHSCXXXXXXXXXXXXXXXXLVGPIPKSAA-FPPMGAHAP 239
WQHQLCKNPRPNPDIKTLFTDH+C + +PK+ +PP+ AH P
Sbjct: 181 WQHQLCKNPRPNPDIKTLFTDHTCTPPNGARASPVSVP---LAAVPKAGGTYPPLTAHTP 237
Query: 240 FQPVVSPSPNAIAGWM---TNANPSLPHAAVAQGPPGLVQPPNTAA-FLKHPRTPTSAPA 295
FQP P+ ++AGWM A S+P A VA L PPN A +K P
Sbjct: 238 FQP--PPAGPSLAGWMANAAAATSSVPSAVVAAS--SLPVPPNQAVPIMKRPTI------ 287
Query: 296 IDYQSADSEHLMKRMRVGQPDEVSFSGASHPANI----YTQDDLPKQVVRNLNQGSNVMS 351
DYQSA+SE LMKR+R P A++PA I ++ +DLP+ V L+QGS+V S
Sbjct: 288 TDYQSAESEQLMKRLR---PSGHGVDEATYPAPIPQPLWSVEDLPRTVACTLSQGSSVTS 344
Query: 352 LDFHPVQQTILLVGTNVGDIGIWEVGSRERIAHKTFKVWDISSCTLPLQAALMKDAAISV 411
+DFHP + T+LLVG+ G+I +WEVG RER+ K FK+WDI +C+ Q ++ K+++IS+
Sbjct: 345 MDFHPTRHTLLLVGSTNGEITLWEVGMRERLFSKPFKIWDIQACSPQFQ-SVAKESSISI 403
Query: 412 NRCLWSPDGSILGVAFSKHIVQTYAFVLNGELRQQAEIDAHIGGVNDIAFSHPNKTLSII 471
NR WSPDG ++GVAF+KH++ +A+ E RQ EIDAH G VNDIAFS PNK L ++
Sbjct: 404 NRVTWSPDGDLIGVAFAKHLIHLHAYQQPNETRQVLEIDAHSGAVNDIAFSRPNKQLCVV 463
Query: 472 TCGDDKLIKVWDAQTGQKQYTFEGHEAPVYSVCPHYKESIQFIFSTAIDGKIKAWLYDCL 531
TCGDD+LIKVWD GQK ++FEGHEAPVYS+CPH+KESIQFIFST++DGKIKAWLYD +
Sbjct: 464 TCGDDRLIKVWDMH-GQKLFSFEGHEAPVYSICPHHKESIQFIFSTSLDGKIKAWLYDHM 522
Query: 532 GSRVDYDAPGHWCTTMAYSADGTRLFSCGTSKDGDSHLVEWNETEGAIKRTYNGFRKRS- 590
GSRVDYDAPG WCTTM YSADGTRLFSCGTSKDGDS+LVEWNE+EG+IKRTY+GFRK+S
Sbjct: 523 GSRVDYDAPGKWCTTMLYSADGTRLFSCGTSKDGDSYLVEWNESEGSIKRTYSGFRKKSA 582
Query: 591 -LGVVQFDTTRNRFLAAGDEFVVKFWDMDNTNILTTTDCDGGLPASPRLRFNREGSLLAV 649
+GVVQFDT +N LAAG++ +KFWD+DNT +L++T+ DGGLP PRLRFN+EG+LLAV
Sbjct: 583 GVGVVQFDTAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGGLPGLPRLRFNKEGNLLAV 642
Query: 650 TANENGIKILANTDGQRLLRMLESRAYEGSRGPPQQINTKPPIVNTLGSVS-NVSSPMAV 708
T +NG KILAN DG R LR +R +E R + + K + +S N+ +
Sbjct: 643 TTVDNGFKILANADGLRTLRAFGNRPFEAFRSQYEASSMKVSGAPVVAGISPNIGRMDHI 702
Query: 709 NSERPDRALPTVSMSGLAPMDVSRTPDVKPRITDES-EKVKTWKLADIGDSGHLRALRMP 767
+ P A P+ M+G P SR+ D+KPRI++E +K K W+L ++ ++ R MP
Sbjct: 703 DRNSP--AKPSPIMNGGDP--ASRSIDIKPRISEERPDKAKPWELMEVLNAQQCRVATMP 758
Query: 768 DTSATSSKVVRLLYTNNGVALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANG 827
+T +SKVVRLLYTN+GV LLALGSNA+ +LWKW R D+NP+GK+TA+ PQ WQP +G
Sbjct: 759 ETPDQASKVVRLLYTNSGVGLLALGSNAIQRLWKWARNDQNPSGKATANVVPQHWQPNSG 818
Query: 828 ILMANDTSDGNPEEATACIALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFL 887
++M NDT+D NPE+A CIALSKNDSYVMSA GGKVSLFNMMTFKVMTTFM PPPA+TFL
Sbjct: 819 LVMQNDTADTNPEDAVPCIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFL 878
Query: 888 AFHPQDNNIIAIGMEDSTIQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQ 947
AFHPQDNNIIAIGMEDSTI IYNVRVDEVK++LKGH ++ITGLAFS ++ +LVSSGADAQ
Sbjct: 879 AFHPQDNNIIAIGMEDSTIHIYNVRVDEVKTRLKGHQRRITGLAFSNNLQILVSSGADAQ 938
Query: 948 LCAWSIDGWEKKKSRYIQSPANRSGALVGDTRVQFHNDQTHILVVHESQLAIYDA-KLEC 1006
LC W+ D WEKKKS IQ PA ++ + GDT VQF++D + +LVVHE+QLAIYDA K+E
Sbjct: 939 LCVWATDTWEKKKSVAIQMPAGKTPS--GDTWVQFNSDWSRLLVVHETQLAIYDASKMER 996
Query: 1007 LRSWSPREALPAPISSAIYSCDGLLIYAGFCDGAIGVFEAESLRLRCRIAPSAYI-PPSM 1065
+ W P++AL APIS A YS + L++A F DG IG+F+ E+LRLRCRIAP AY+ ++
Sbjct: 997 IYQWIPQDALSAPISHASYSRNSQLVFAAFTDGNIGIFDVENLRLRCRIAPPAYLSSAAI 1056
Query: 1066 SSGGSVYPMVVAAHPLEPNQIAVGMSDGAVHVVEPLDSDPKWGVAPPQDNGTHPTISAAP 1125
+S SVYP+VVAAHP E NQ AVG+SDG+V V+EPL+S+ KWG PP +NG ++
Sbjct: 1057 NSNPSVYPLVVAAHPQESNQFAVGLSDGSVKVIEPLESEGKWGTTPPTENGVPNGRTSTS 1116
Query: 1126 AAANKP 1131
+A + P
Sbjct: 1117 SATSNP 1122
>Os05g0240200 Similar to CTV.2
Length = 1315
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/379 (70%), Positives = 307/379 (81%), Gaps = 12/379 (3%)
Query: 726 APMDVSRTPDVKPRITDESEKVKTWKLADIGDSGHLRALRMPDTSATSSKVVRLLYTNNG 785
A M VSRTP+ + +E+ WK A+I SG +RALRMP T A+SSKV+ LLY +G
Sbjct: 930 AYMHVSRTPE----LVNEA-----WK-ANIVSSGRIRALRMPVTEASSSKVICLLYRKSG 979
Query: 786 VALLALGSNAVHKLWKWQRTDRNPNGKSTASFTPQMWQPANGILMANDTSDGNPEEATAC 845
LLAL SNAVHKLWKW+ D+NP G ST S PQ+WQP + ILM NDT++GNPEEA AC
Sbjct: 980 KGLLALSSNAVHKLWKWESNDKNPAGMSTTSVPPQVWQPESDILM-NDTANGNPEEAAAC 1038
Query: 846 IALSKNDSYVMSASGGKVSLFNMMTFKVMTTFMAPPPAATFLAFHPQDNNIIAIGMEDST 905
LSKND Y++SASGGKVSLFNM+ FK MTTF+APPP+ATFLAFHP DNNIIAIG +DS+
Sbjct: 1039 SLLSKNDCYLISASGGKVSLFNMLNFKTMTTFIAPPPSATFLAFHPHDNNIIAIGTDDSS 1098
Query: 906 IQIYNVRVDEVKSKLKGHSKKITGLAFSQSMNMLVSSGADAQLCAWSIDGWEKKKSRYIQ 965
I +YN+RVDEVK LKGH KKITGL FS SMN+LVSSGAD+QLC WS++ W KKKSRYIQ
Sbjct: 1099 ILLYNIRVDEVKWVLKGHQKKITGLVFSLSMNVLVSSGADSQLCVWSMEDWAKKKSRYIQ 1158
Query: 966 SPANRSGALVGDTRVQFHNDQTHILVVHESQLAIYDAKLECLRSWSPREALPAPISSAIY 1025
P+N SGALVGD VQFH DQ +LVVHESQLAIYD +LECL SW P + L AP+SSA+Y
Sbjct: 1159 PPSNHSGALVGDIMVQFHYDQKRLLVVHESQLAIYDEELECLCSWFPSDPLSAPVSSAVY 1218
Query: 1026 SCDGLLIYAGFCDGAIGVFEAESLRLRCRIAPSAYIPPSMSSGGS-VYPMVVAAHPLEPN 1084
S DGLLIYAGFCDGAIG+F+ ESL L+CRIAPSAYIP S+SSGG VYPMVVAAHP +PN
Sbjct: 1219 SSDGLLIYAGFCDGAIGIFQVESLMLQCRIAPSAYIPSSVSSGGEIVYPMVVAAHPWKPN 1278
Query: 1085 QIAVGMSDGAVHVVEPLDS 1103
Q AVGMSDGAVHV+EPLD+
Sbjct: 1279 QFAVGMSDGAVHVLEPLDT 1297
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 41,301,274
Number of extensions: 1833008
Number of successful extensions: 6088
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6053
Number of HSP's successfully gapped: 4
Length of query: 1133
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1021
Effective length of database: 11,187,833
Effective search space: 11422777493
Effective search space used: 11422777493
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 162 (67.0 bits)