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Os08g0162100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to CTV.2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.02) R2 : 0.108
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.314 (0.0421) R2dN8 : 0.14 R2N8 : 0.108
σ : 0.377
deviance : 65.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.67 0.288 12.8 0.546 0.796 0.341 -0.525 -0.468 0.336 1.58 10 69 -- --
38.13 0.288 12.8 0.555 0.802 0.341 -0.0951 -- 0.342 1.59 10.11 68 -- --
38.09 0.287 12.8 0.56 0.801 0.342 -- -0.115 0.343 1.59 10.1 68 -- --
38.16 0.288 12.8 0.557 0.801 0.341 -- -- 0.343 1.59 10.11 68 -- --
51.53 0.334 12.8 0.537 -- 0.388 -- -0.22 0.315 -- 10.21 1252 -- --
41.37 0.302 12.8 0.59 0.479 -- -0.169 -- 0.369 2.26 -- -- -- --
41.48 0.302 12.8 0.594 0.479 -- -- -- 0.37 2.25 -- -- -- --
51.47 0.334 12.8 0.548 -- 0.364 -- -- 0.306 -- 10 1244 -- --
46.3 0.317 12.9 -- 0.807 0.359 -- -- 0.284 1.54 10.01 78 -- --
55.13 0.347 12.8 0.614 -- -- -- -- 0.382 -- -- -- -- --
50.79 0.333 12.8 -- 0.49 -- -- -- 0.304 2.28 -- -- -- --
58.05 0.355 12.9 -- -- 0.491 -- -- 0.207 -- 10.01 1256 -- --
65.09 0.377 12.8 -- -- -- -- -- 0.314 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.39 radiation 20 30 < th dose dependent rect. 6 23
2 35.45 humidity 60 10 > th dose dependent rect. 6 23
8 35.75 humidity 80 10 > th dose independent rect. 24 16
17 36.06 radiation 10 90 < th dose independent rect. 6 22
30 36.28 radiation 10 30 < th dose dependent rect. 6 10
31 36.29 humidity 80 30 > th dose independent rect. 6 10
38 36.38 radiation 1 30 > th dose independent rect. 7 23
46 36.55 humidity 50 10 > th dose dependent rect. 24 16
57 36.64 radiation 10 10 < th dose independent rect. 6 23
58 36.65 radiation 20 90 < th dose dependent rect. 23 15
61 36.67 humidity 60 10 > th dose dependent rect. 22 22
74 36.73 radiation 20 10 < th dose dependent rect. 24 16
76 36.74 humidity 80 10 > th dose independent rect. 8 8
81 36.77 humidity 50 90 > th dose dependent rect. 23 16
86 36.78 humidity 80 10 > th dose independent rect. 6 23
100 36.85 radiation 30 90 < th dose dependent rect. 12 16
110 36.88 radiation 20 90 < th dose dependent rect. 21 23
129 36.96 temperature 10 10 > th dose dependent rect. 4 20
155 37.03 humidity 60 10 > th dose dependent rect. 22 18
163 37.05 humidity 80 10 > th dose independent rect. 22 22
164 37.05 humidity 70 10 > th dose dependent rect. 6 10
167 37.05 humidity 50 10 > th dose dependent rect. 12 16
186 37.11 radiation 20 30 < th dose dependent rect. 9 19
199 37.14 radiation 10 90 < th dose independent rect. 23 15
217 37.19 humidity 80 1440 < th dose independent rect. 7 5
230 37.22 humidity 80 1440 > th dose independent rect. 7 5
234 37.23 temperature 30 30 < th dose independent rect. 12 16
259 37.28 humidity 60 10 > th dose dependent rect. 9 19
269 37.31 radiation 10 10 < th dose independent rect. 24 15
274 37.32 humidity 50 10 > th dose dependent rect. 11 9
280 37.33 humidity 70 10 > th dose dependent rect. 9 7
284 37.34 radiation 1 30 < th dose independent rect. 21 23
285 37.34 humidity 60 270 > th dose dependent rect. 11 3
315 37.38 humidity 50 90 > th dose dependent rect. 11 8
356 37.43 radiation 20 10 < th dose dependent rect. 22 18
386 37.48 radiation 20 90 < th dose independent rect. 12 16
387 37.48 radiation 10 90 > th dose independent rect. 15 21
395 37.49 humidity 60 10 > th dose dependent rect. 9 11
405 37.50 humidity 60 90 > th dose independent rect. 12 16
428 37.52 humidity 90 1440 < th dose dependent rect. 11 1
437 37.53 humidity 80 90 > th dose independent rect. 11 4
472 37.56 radiation 10 90 > th dose independent rect. 13 23
492 37.58 humidity 50 1440 > th dose dependent rect. 11 1
495 37.58 humidity 60 10 > th dose dependent rect. 11 5
508 37.59 humidity 90 10 < th dose dependent rect. 7 17
516 37.60 humidity 80 1440 < th dose dependent rect. 6 6
566 37.64 humidity 80 10 > th dose independent sin 2 NA
605 37.67 humidity 80 30 < th dose independent sin 3 NA
608 37.67 humidity 60 10 > th dose independent rect. 12 16
640 37.70 radiation 10 10 < th dose independent rect. 6 10
693 37.74 humidity 50 1440 > th dose dependent rect. 8 5
755 37.77 radiation 20 90 < th dose dependent rect. 23 20
782 37.79 humidity 90 30 < th dose dependent rect. 20 23
819 37.82 radiation 10 90 < th dose independent rect. 6 11
841 37.83 temperature 30 270 < th dose independent rect. 22 18
890 37.86 humidity 80 30 < th dose independent rect. 5 7
909 37.87 temperature 25 1440 > th dose independent rect. 7 1
910 37.87 humidity 80 30 < th dose independent rect. 7 5
927 37.87 humidity 90 10 < th dose dependent rect. 7 23
934 37.88 humidity 50 270 > th dose dependent rect. 9 7
962 37.90 wind 1 1440 < th dose dependent rect. 3 2
969 37.90 humidity 90 10 < th dose dependent rect. 5 19