BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0206700 Os07g0206700|AK072893
(344 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0206700 Cycloartenol-C-24-methyltransferase 1 (EC 2.1.... 684 0.0
Os03g0807600 Similar to Cycloartenol-C-24-methyltransferase... 476 e-134
Os03g0136200 24-methylenesterol C-methyltransferase 2 (EC 2... 246 3e-65
Os11g0296900 238 4e-63
Os02g0701600 Similar to Tocopherol O-methyltransferase, chl... 85 1e-16
Os01g0695100 Similar to Phosphoethanolamine methyltransferase 71 1e-12
AK069137 70 3e-12
>Os07g0206700 Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-
methyltransferase 1) (Sterol C-methyltransferase 1)
Length = 344
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/344 (95%), Positives = 330/344 (95%)
Query: 1 MSRSGAMDLASGLGGKITKDEVKSAVDXXXXXXXXXXXXXXARKSNYTDMVNKYYDLATS 60
MSRSGAMDLASGLGGKITKDEVKSAVD ARKSNYTDMVNKYYDLATS
Sbjct: 1 MSRSGAMDLASGLGGKITKDEVKSAVDEYEKYHGYYGGKEEARKSNYTDMVNKYYDLATS 60
Query: 61 FYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAK 120
FYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAK
Sbjct: 61 FYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAK 120
Query: 121 FSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCH 180
FSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCH
Sbjct: 121 FSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCH 180
Query: 181 APDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKDEIELGNGLPDIRSTQQ 240
APDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKDEIELGNGLPDIRSTQQ
Sbjct: 181 APDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKDEIELGNGLPDIRSTQQ 240
Query: 241 CLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFRLTTVGRAITRTMVKALEYV 300
CLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFRLTTVGRAITRTMVKALEYV
Sbjct: 241 CLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFRLTTVGRAITRTMVKALEYV 300
Query: 301 GLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPISE 344
GLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPISE
Sbjct: 301 GLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPISE 344
>Os03g0807600 Similar to Cycloartenol-C-24-methyltransferase (EC 2.1.1.41)
(24-sterol C- methyltransferase 1) (Sterol
C-methyltransferase 1) (STEROL METHYLTRANSFERASE 1)
(CEPHALOPOD protein)
Length = 392
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/303 (73%), Positives = 255/303 (84%)
Query: 42 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPG 101
+R SNY D+ NKYYDL TSFYEYGWGESFHF RW GE+LRES+KRHEHFLALQLG+K G
Sbjct: 86 SRTSNYADLANKYYDLVTSFYEYGWGESFHFGSRWQGETLRESLKRHEHFLALQLGLKKG 145
Query: 102 MKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMK 161
MKVLDVGCGIGGPLREIA+FS ASVTGLNNN YQI+RGKELN G+S TC+FVKADFM
Sbjct: 146 MKVLDVGCGIGGPLREIARFSSASVTGLNNNAYQISRGKELNFSVGLSETCNFVKADFMN 205
Query: 162 MPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKR 221
MP D TFDA YAIEATCHAPD VG Y+EI RVLKPGQ FA+ EWC+TD Y+P N+ H+
Sbjct: 206 MPIPDATFDAAYAIEATCHAPDAVGVYREICRVLKPGQLFALDEWCMTDKYDPGNSRHRS 265
Query: 222 IKDEIELGNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFR 281
IK EIELGNGLPDIR+T+QC+QA KDAGFEV+ KDLAEDSP+PWYLPLD S+FSL+ FR
Sbjct: 266 IKAEIELGNGLPDIRTTKQCIQALKDAGFEVVSVKDLAEDSPLPWYLPLDSSQFSLNGFR 325
Query: 282 LTTVGRAITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKP 341
LT VGR IT +VK LE + +APQGS RVS+FLE AAEGLV+G K+ IFTP++F L RKP
Sbjct: 326 LTRVGRFITHMLVKTLECLHVAPQGSLRVSSFLETAAEGLVKGAKEGIFTPIFFVLARKP 385
Query: 342 ISE 344
+ +
Sbjct: 386 LDK 388
>Os03g0136200 24-methylenesterol C-methyltransferase 2 (EC 2.1.1.143) (24-sterol
C- methyltransferase 2) (Sterol-C-methyltransferase 2)
Length = 363
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 170/292 (58%), Gaps = 10/292 (3%)
Query: 51 VNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCG 110
V+ +Y+L T YE+GWG+SFHF+ G S RE+ + HE +A L KPG ++LDVGCG
Sbjct: 79 VDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHREATRVHEERVADLLQAKPGHRLLDVGCG 138
Query: 111 IGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFD 170
+GGP+R IA S ++V G+ NEYQ+ R + NR AG+ C+ V +F+ MPFSD +FD
Sbjct: 139 VGGPMRAIAAHSGSNVVGITINEYQVNRARAHNRKAGLDSRCEVVCGNFLSMPFSDASFD 198
Query: 171 AVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKDEIELGN 230
Y+IEATCHAP Y E++RVLKPG + YEW T Y +N H IE G+
Sbjct: 199 GAYSIEATCHAPRLQDVYGEVFRVLKPGGLYVSYEWVTTSLYRADNPEHVEAIHGIERGD 258
Query: 231 GLPDIRSTQQCLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFRLTTVGRAIT 290
LP +R + AK+ GFEV+ + DLA +PW+ L R + L
Sbjct: 259 ALPGLRRQDEIASIAKEVGFEVLKELDLALPPALPWWTRLKMGRIAYWRNSL-------- 310
Query: 291 RTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKPI 342
+V+ L + +AP+G V L + A+ L GG+ IFTPM+ L+RKP+
Sbjct: 311 --VVRVLTMLRIAPKGVCEVHEMLYETAQHLTRGGETGIFTPMHMVLLRKPV 360
>Os11g0296900
Length = 166
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 110/162 (67%), Positives = 132/162 (81%)
Query: 65 GWGESFHFAHRWNGESLRESIKRHEHFLALQLGVKPGMKVLDVGCGIGGPLREIAKFSLA 124
G+ H +W+GE+LRES+KR EHFLALQLG+K GMKVLDVGCGIGGPLREIA+FS A
Sbjct: 5 GYLVKCHTDTQWHGETLRESLKRREHFLALQLGLKKGMKVLDVGCGIGGPLREIARFSSA 64
Query: 125 SVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPFSDNTFDAVYAIEATCHAPDP 184
SVTGLNNN+YQI+RG+ELN G+S TC++VK DFM MP D TFDA YA++ATCHAPD
Sbjct: 65 SVTGLNNNDYQISRGQELNFSVGLSETCNYVKGDFMNMPIPDCTFDAAYALDATCHAPDA 124
Query: 185 VGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKDEI 226
VG Y EI+RVLKPG+ FA+ EWC+TD Y+P+NA H IK E+
Sbjct: 125 VGVYSEIFRVLKPGKLFAMDEWCLTDKYDPDNARHLSIKGEL 166
>Os02g0701600 Similar to Tocopherol O-methyltransferase, chloroplast precursor
(EC 2.1.1.95) (Gamma-tocopherol methyltransferase)
Length = 362
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 55 YDLATSFYEYGWGESFHFAHRWNGESL------RESIKRHEHFLALQL----GVKPGMKV 104
YD ++ +E WGE H GE+ R I+ E LA K V
Sbjct: 82 YDESSGVWESIWGEHMHHGFYDAGEAASMSDHRRAQIRMIEESLAFAAVPDDAEKKPKSV 141
Query: 105 LDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDFVKADFMKMPF 164
+DVGCGIGG R +A A G+ + Q RG L G+S F D ++ PF
Sbjct: 142 VDVGCGIGGSSRYLANKYGAQCYGITLSPVQAERGNALAAEQGLSDKVSFQVGDALEQPF 201
Query: 165 SDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEPNNATHKRIKD 224
D FD V+++E+ H PD E+ RV PG + WC + EP+ + K D
Sbjct: 202 PDGQFDLVWSMESGEHMPDKRQFVSELARVAAPGARIIIVTWC-HRNLEPSEESLK--PD 258
Query: 225 EIEL------GNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAED 261
E+ L LPD S ++ A+ E I D +E+
Sbjct: 259 ELNLLKRICDAYYLPDWCSPSDYVKIAESLSLEDIRTADWSEN 301
>Os01g0695100 Similar to Phosphoethanolamine methyltransferase
Length = 499
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 95 QLGVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDF 154
+L +KPG VLDVGCGIGG +A V G++ + ++ L R G + +F
Sbjct: 286 RLDLKPGQNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMVSFA--LERAIGRKCSVEF 343
Query: 155 VKADFMKMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEP 214
AD K + DNTFD +Y+ + H D +K ++ LKPG + ++C +P
Sbjct: 344 EVADCTKKTYPDNTFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPG-KP 402
Query: 215 NNATHKRIKDEIELGNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAED 261
+ IK + G L D+R+ Q L+ +AGF + +AED
Sbjct: 403 SEEFAAYIK---QRGYDLHDVRAYGQMLE---NAGFHDV----IAED 439
>AK069137
Length = 527
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 95 QLGVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDF 154
+L +KPG VLDVGCGIGG +A V G++ + ++ L R G + +F
Sbjct: 314 RLDLKPGQNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMVSFA--LERAIGRKCSVEF 371
Query: 155 VKADFMKMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEP 214
AD K + DNTFD +Y+ + H D +K ++ LKPG + ++C +P
Sbjct: 372 EVADCTKKTYPDNTFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPG-KP 430
Query: 215 NNATHKRIKDEIELGNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAED 261
+ IK + G D+R+ Q L+ +AGF + +AED
Sbjct: 431 SEEFAAYIK---QRGYDFHDVRAYGQMLE---NAGFHDV----IAED 467
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,272,087
Number of extensions: 456939
Number of successful extensions: 939
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 938
Number of HSP's successfully gapped: 7
Length of query: 344
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 242
Effective length of database: 11,709,973
Effective search space: 2833813466
Effective search space used: 2833813466
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)