Os01g0695100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphoethanolamine methyltransferase.
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Os01g0695100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphoethanolamine methyltransferase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.92 | 0.573 | 10.2 | -0.437 | 2.08 | -1.86 | -3.35 | -2.23 | -0.249 | 13 | 50.95 | 829 | 17.7 | 1.28 |
| 154 | 0.578 | 10.1 | -0.529 | 2.08 | -1.89 | -1.63 | -- | -0.245 | 12.9 | 51.38 | 827 | 17.7 | 1.27 |
| 161.68 | 0.592 | 10.2 | -0.652 | 1.96 | -2 | -- | 0.895 | -0.238 | 12.9 | 48.12 | 829 | 17.7 | 1.09 |
| 164.38 | 0.597 | 10.2 | -0.614 | 1.99 | -1.96 | -- | -- | -0.249 | 12.9 | 48.27 | 831 | 17.7 | 1.17 |
| 166.19 | 0.6 | 10.2 | -0.661 | -- | -3.76 | -- | 1.14 | -0.278 | -- | 17.95 | 791 | 16 | 4.49 |
| 217.59 | 0.692 | 10.2 | -0.606 | 3.41 | -- | -1.46 | -- | -0.366 | 13 | -- | -- | -- | -- |
| 226.47 | 0.705 | 10.2 | -0.659 | 3.41 | -- | -- | -- | -0.374 | 13 | -- | -- | -- | -- |
| 168.93 | 0.605 | 10.2 | -0.684 | -- | -3.9 | -- | -- | -0.271 | -- | 17.13 | 821 | 15.5 | 5.35 |
| 174.79 | 0.616 | 10.2 | -- | 1.99 | -1.94 | -- | -- | -0.197 | 13 | 47.85 | 829 | 17.6 | 1.35 |
| 949.97 | 1.44 | 10.2 | -0.786 | -- | -- | -- | -- | -0.439 | -- | -- | -- | -- | -- |
| 237.9 | 0.722 | 10.2 | -- | 3.42 | -- | -- | -- | -0.3 | 13 | -- | -- | -- | -- |
| 180.24 | 0.625 | 10.2 | -- | -- | -3.85 | -- | -- | -0.189 | -- | 12.96 | 824 | 15.5 | 5.31 |
| 966.28 | 1.45 | 10.2 | -- | -- | -- | -- | -- | -0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.73 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 6 | 168.24 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 19 | 171.90 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 20 | 171.93 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 4 |
| 23 | 172.55 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 1 |
| 26 | 172.66 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 28 | 172.81 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 31 | 173.25 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 12 |
| 32 | 173.31 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 19 |
| 36 | 173.57 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 12 |
| 51 | 174.71 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 53 | 174.75 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 57 | 174.97 | humidity | 90.0 | 720 | > th | dose independent | rect. | 16 | 6 |
| 69 | 175.42 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 82 | 175.92 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 87 | 176.07 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 88 | 176.07 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 117 | 176.78 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 136 | 177.23 | humidity | 90.0 | 720 | > th | dose independent | rect. | 12 | 11 |
| 145 | 177.38 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 163 | 177.73 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 169 | 177.80 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 176 | 177.84 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 13 |
| 183 | 178.00 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 6 |
| 200 | 178.34 | humidity | 70.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 211 | 178.45 | humidity | 90.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 225 | 178.64 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 227 | 178.64 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 253 | 179.04 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 10 | 23 |
| 254 | 179.04 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 320 | 179.65 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 18 |
| 328 | 179.79 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 336 | 179.88 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 351 | 180.00 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 16 |
| 362 | 180.05 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 375 | 180.14 | precipitation | 0.1 | 720 | < th | dose independent | sin | 12 | NA |
| 376 | 180.14 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 12 | NA |
| 394 | 180.26 | precipitation | 0.1 | 720 | > th | dose independent | sin | 12 | NA |
| 395 | 180.26 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 432 | 180.47 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 434 | 180.47 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 443 | 180.53 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 18 |
| 445 | 180.54 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 449 | 180.56 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 452 | 180.57 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 456 | 180.61 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 16 |
| 480 | 180.71 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 492 | 180.76 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 11 |
| 497 | 180.76 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 498 | 180.77 | humidity | 90.0 | 720 | > th | dose independent | sin | 20 | NA |
| 514 | 180.83 | humidity | 70.0 | 1440 | < th | dose independent | sin | 14 | NA |
| 520 | 180.87 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 19 | 9 |
| 523 | 180.88 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 12 |
| 553 | 181.14 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 557 | 181.16 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 569 | 181.19 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 19 | 10 |
| 580 | 181.23 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 602 | 181.36 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 648 | 181.52 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 681 | 181.60 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 686 | 181.63 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 704 | 181.71 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 714 | 181.79 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 744 | 181.87 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 17 | 14 |
| 749 | 181.91 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 752 | 181.92 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 758 | 181.95 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 762 | 181.97 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 769 | 182.01 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 777 | 182.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 780 | 182.03 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 783 | 182.04 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 14 | 14 |
| 796 | 182.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 807 | 182.09 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 808 | 182.10 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 813 | 182.11 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 814 | 182.11 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 829 | 182.11 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 912 | 182.11 | humidity | 90.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 915 | 182.12 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 15 |
| 932 | 182.13 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 938 | 182.13 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 19 |
| 944 | 182.13 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 960 | 182.15 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 980 | 182.15 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 998 | 182.16 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 23 |