BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0695100 Os01g0695100|AY551100
(499 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0695100 Similar to Phosphoethanolamine methyltransferase 1036 0.0
AK069137 1022 0.0
Os05g0548900 Similar to Phosphoethanolamine methyltransferase 380 e-105
Os02g0701600 Similar to Tocopherol O-methyltransferase, chl... 77 2e-14
Os07g0206700 Cycloartenol-C-24-methyltransferase 1 (EC 2.1.... 71 2e-12
Os03g0807600 Similar to Cycloartenol-C-24-methyltransferase... 66 6e-11
>Os01g0695100 Similar to Phosphoethanolamine methyltransferase
Length = 499
Score = 1036 bits (2680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/499 (100%), Positives = 499/499 (100%)
Query: 1 MDAAAATAVNGVLEVEERKAQKSYWEEHSKDLTVEAMMLDSRAADLDKEERPEILSLLPP 60
MDAAAATAVNGVLEVEERKAQKSYWEEHSKDLTVEAMMLDSRAADLDKEERPEILSLLPP
Sbjct: 1 MDAAAATAVNGVLEVEERKAQKSYWEEHSKDLTVEAMMLDSRAADLDKEERPEILSLLPP 60
Query: 61 YEGKSVLELGAGIGRFTGELVKTAGHVLAMDFIESVIKKNESINGHHKNASFMCADVTCP 120
YEGKSVLELGAGIGRFTGELVKTAGHVLAMDFIESVIKKNESINGHHKNASFMCADVTCP
Sbjct: 61 YEGKSVLELGAGIGRFTGELVKTAGHVLAMDFIESVIKKNESINGHHKNASFMCADVTCP 120
Query: 121 DLMIEDNSIDLIFSNWLLMYLSDEEVEKLVKRMVRWLKVGGYIFFRESCFHQSGDSKRKV 180
DLMIEDNSIDLIFSNWLLMYLSDEEVEKLVKRMVRWLKVGGYIFFRESCFHQSGDSKRKV
Sbjct: 121 DLMIEDNSIDLIFSNWLLMYLSDEEVEKLVKRMVRWLKVGGYIFFRESCFHQSGDSKRKV 180
Query: 181 NPTHYREPRFYTKVFKECQALDQDGNSFELSVLTCKCVGAYVKSKKNQNQICWLWQKVDS 240
NPTHYREPRFYTKVFKECQALDQDGNSFELSVLTCKCVGAYVKSKKNQNQICWLWQKVDS
Sbjct: 181 NPTHYREPRFYTKVFKECQALDQDGNSFELSVLTCKCVGAYVKSKKNQNQICWLWQKVDS 240
Query: 241 TEDRGFQRFLDNVQYKASGILRYERIFGEGFVSTGGIETTKEFVDRLDLKPGQNVLDVGC 300
TEDRGFQRFLDNVQYKASGILRYERIFGEGFVSTGGIETTKEFVDRLDLKPGQNVLDVGC
Sbjct: 241 TEDRGFQRFLDNVQYKASGILRYERIFGEGFVSTGGIETTKEFVDRLDLKPGQNVLDVGC 300
Query: 301 GIGGGDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKKTYPDNTFDV 360
GIGGGDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKKTYPDNTFDV
Sbjct: 301 GIGGGDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKKTYPDNTFDV 360
Query: 361 IYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIKQRGYDLHDV 420
IYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIKQRGYDLHDV
Sbjct: 361 IYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIKQRGYDLHDV 420
Query: 421 RAYGQMLENAGFHDVIAEDRTDQFLDVLERELAKVEKNKNEFVSDFSQEDYDAIVNGWKA 480
RAYGQMLENAGFHDVIAEDRTDQFLDVLERELAKVEKNKNEFVSDFSQEDYDAIVNGWKA
Sbjct: 421 RAYGQMLENAGFHDVIAEDRTDQFLDVLERELAKVEKNKNEFVSDFSQEDYDAIVNGWKA 480
Query: 481 KLQRSSAGEQRWGLFIATK 499
KLQRSSAGEQRWGLFIATK
Sbjct: 481 KLQRSSAGEQRWGLFIATK 499
>AK069137
Length = 527
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/495 (99%), Positives = 492/495 (99%)
Query: 5 AATAVNGVLEVEERKAQKSYWEEHSKDLTVEAMMLDSRAADLDKEERPEILSLLPPYEGK 64
TAVNGVLEVEERKAQKSYWEEHSKDLTVEAMMLDSRAADLDKEERPEILSLLPPYEGK
Sbjct: 33 PPTAVNGVLEVEERKAQKSYWEEHSKDLTVEAMMLDSRAADLDKEERPEILSLLPPYEGK 92
Query: 65 SVLELGAGIGRFTGELVKTAGHVLAMDFIESVIKKNESINGHHKNASFMCADVTCPDLMI 124
SVLELGAGIGRFTGELVKTAGHVLAMDFIESVIKKNESINGHHKNASFMCADVTCPDLMI
Sbjct: 93 SVLELGAGIGRFTGELVKTAGHVLAMDFIESVIKKNESINGHHKNASFMCADVTCPDLMI 152
Query: 125 EDNSIDLIFSNWLLMYLSDEEVEKLVKRMVRWLKVGGYIFFRESCFHQSGDSKRKVNPTH 184
EDNSIDLIFSNWLLMYLSDEEVEKLVKRMVRWLKVGGYIFFRESCFHQSGDSKRKVNPTH
Sbjct: 153 EDNSIDLIFSNWLLMYLSDEEVEKLVKRMVRWLKVGGYIFFRESCFHQSGDSKRKVNPTH 212
Query: 185 YREPRFYTKVFKECQALDQDGNSFELSVLTCKCVGAYVKSKKNQNQICWLWQKVDSTEDR 244
YREPRFYTKVFKECQALDQDGNSFELSVLTCKCVGAYVKSKKNQNQICWLWQKVDSTEDR
Sbjct: 213 YREPRFYTKVFKECQALDQDGNSFELSVLTCKCVGAYVKSKKNQNQICWLWQKVDSTEDR 272
Query: 245 GFQRFLDNVQYKASGILRYERIFGEGFVSTGGIETTKEFVDRLDLKPGQNVLDVGCGIGG 304
GFQRFLDNVQYKASGILRYERIFGEGFVSTGGIETTKEFVDRLDLKPGQNVLDVGCGIGG
Sbjct: 273 GFQRFLDNVQYKASGILRYERIFGEGFVSTGGIETTKEFVDRLDLKPGQNVLDVGCGIGG 332
Query: 305 GDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKKTYPDNTFDVIYSR 364
GDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKKTYPDNTFDVIYSR
Sbjct: 333 GDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKKTYPDNTFDVIYSR 392
Query: 365 DTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIKQRGYDLHDVRAYG 424
DTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIKQRGYD HDVRAYG
Sbjct: 393 DTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIKQRGYDFHDVRAYG 452
Query: 425 QMLENAGFHDVIAEDRTDQFLDVLERELAKVEKNKNEFVSDFSQEDYDAIVNGWKAKLQR 484
QMLENAGFHDVIAEDRTDQFLDVLERELAKVEKNKNEFVSDFSQEDYDAIVNGWKAKLQR
Sbjct: 453 QMLENAGFHDVIAEDRTDQFLDVLERELAKVEKNKNEFVSDFSQEDYDAIVNGWKAKLQR 512
Query: 485 SSAGEQRWGLFIATK 499
SSAGEQRWGLFIATK
Sbjct: 513 SSAGEQRWGLFIATK 527
>Os05g0548900 Similar to Phosphoethanolamine methyltransferase
Length = 208
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/208 (85%), Positives = 193/208 (92%)
Query: 292 GQNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMVSFALERAIGRKCSVEFEVADCTKK 351
GQ VLDVGCGIGGGDFYMA+ YD HV+GIDLSINMVSFA+ERAIGRKCSVEFEVADCT K
Sbjct: 1 GQKVLDVGCGIGGGDFYMAENYDAHVLGIDLSINMVSFAIERAIGRKCSVEFEVADCTTK 60
Query: 352 TYPDNTFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPGKPSEEFAAYIK 411
TY NTFDVIYSRDTILHI DKP+LF+SFFKWLKPGGKVLISDYC+ PGKPSEEFAAYIK
Sbjct: 61 TYAPNTFDVIYSRDTILHIHDKPALFRSFFKWLKPGGKVLISDYCRNPGKPSEEFAAYIK 120
Query: 412 QRGYDLHDVRAYGQMLENAGFHDVIAEDRTDQFLDVLERELAKVEKNKNEFVSDFSQEDY 471
QRGYDLHDV+ YG+MLE+AGFH VIAEDRTDQFL VL+RELA+VEKNK F++DF+QEDY
Sbjct: 121 QRGYDLHDVKTYGKMLEDAGFHHVIAEDRTDQFLRVLQRELAEVEKNKEAFMADFTQEDY 180
Query: 472 DAIVNGWKAKLQRSSAGEQRWGLFIATK 499
D IVNGW AKL+RSSAGEQRWGLFIATK
Sbjct: 181 DDIVNGWNAKLKRSSAGEQRWGLFIATK 208
>Os02g0701600 Similar to Tocopherol O-methyltransferase, chloroplast precursor
(EC 2.1.1.95) (Gamma-tocopherol methyltransferase)
Length = 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 285 DRLDLKPGQNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMV----SFALERAIGRKCS 340
D + KP ++V+DVGCGIGG Y+A+KY GI LS + A E+ + K
Sbjct: 132 DDAEKKP-KSVVDVGCGIGGSSRYLANKYGAQCYGITLSPVQAERGNALAAEQGLSDK-- 188
Query: 341 VEFEVADCTKKTYPDNTFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPG 400
V F+V D ++ +PD FD+++S ++ H+ DK + PG +++I +C
Sbjct: 189 VSFQVGDALEQPFPDGQFDLVWSMESGEHMPDKRQFVSELARVAAPGARIIIVTWCHRNL 248
Query: 401 KPSEE 405
+PSEE
Sbjct: 249 EPSEE 253
>Os07g0206700 Cycloartenol-C-24-methyltransferase 1 (EC 2.1.1.41) (24-sterol C-
methyltransferase 1) (Sterol C-methyltransferase 1)
Length = 344
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 286 RLDLKPGQNVLDVGCGIGGGDFYMADKYDVHVVGIDLSINMVSFA--LERAIGRKCSVEF 343
+L +KPG VLDVGCGIGG +A V G++ + ++ L R G + +F
Sbjct: 95 QLGVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKELNRVAGVSGTCDF 154
Query: 344 EVADCTKKTYPDNTFDVIYSRDTILHIQDKPSLFKSFFKWLKPGGKVLISDYCKCPG-KP 402
AD K + DNTFD +Y+ + H D +K ++ LKPG + ++C +P
Sbjct: 155 VKADFMKMPFSDNTFDAVYAIEATCHAPDPVGCYKEIYRVLKPGQCFAVYEWCITDHYEP 214
Query: 403 SEEFAAYIK---QRGYDLHDVRAYGQMLE---NAGFHDV----IAED 439
+ IK + G L D+R+ Q L+ +AGF + +AED
Sbjct: 215 NNATHKRIKDEIELGNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAED 261
>Os03g0807600 Similar to Cycloartenol-C-24-methyltransferase (EC 2.1.1.41)
(24-sterol C- methyltransferase 1) (Sterol
C-methyltransferase 1) (STEROL METHYLTRANSFERASE 1)
(CEPHALOPOD protein)
Length = 392
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 263 YERIFGEGFV--STGGIETTKEFVDR--------LDLKPGQNVLDVGCGIGGGDFYMADK 312
YE +GE F S ET +E + R L LK G VLDVGCGIGG +A
Sbjct: 106 YEYGWGESFHFGSRWQGETLRESLKRHEHFLALQLGLKKGMKVLDVGCGIGGPLREIARF 165
Query: 313 YDVHVVGIDLSINMVSFA--LERAIGRKCSVEFEVADCTKKTYPDNTFDVIYSRDTILHI 370
V G++ + +S L ++G + F AD PD TFD Y+ + H
Sbjct: 166 SSASVTGLNNNAYQISRGKELNFSVGLSETCNFVKADFMNMPIPDATFDAAYAIEATCHA 225
Query: 371 QDKPSLFKSFFKWLKPGGKVLISDYCKC----PGKPSEEFAAYIKQRGYDLHDVRAYG-- 424
D +++ + LKPG + ++C PG + G L D+R
Sbjct: 226 PDAVGVYREICRVLKPGQLFALDEWCMTDKYDPGNSRHRSIKAEIELGNGLPDIRTTKQC 285
Query: 425 -QMLENAGFHDVIAED 439
Q L++AGF V +D
Sbjct: 286 IQALKDAGFEVVSVKD 301
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,314,042
Number of extensions: 745143
Number of successful extensions: 1764
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1760
Number of HSP's successfully gapped: 6
Length of query: 499
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 394
Effective length of database: 11,553,331
Effective search space: 4552012414
Effective search space used: 4552012414
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)