BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0705300 Os06g0705300|AK121711
         (289 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0705300  Conserved hypothetical protein 1589, plant fam...   567   e-162
Os02g0137100  Conserved hypothetical protein 1589, plant fam...   358   3e-99
Os01g0220200  Conserved hypothetical protein 1589, plant fam...   107   1e-23
Os05g0212400  Conserved hypothetical protein 1589, plant fam...    87   2e-17

>Os06g0705300 Conserved hypothetical protein 1589, plant family protein
          Length = 289

 Score =  567 bits (1461), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 277/289 (95%), Positives = 277/289 (95%)

Query: 1   MSGADVDKVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNREFFKAYY 60
           MSGADVDKVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNREFFKAYY
Sbjct: 1   MSGADVDKVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNREFFKAYY 60

Query: 61  LRLMLKNQITAFNKLLEDQLRIINKEYHPGPSSMPLPNGSNSNLLKQNPCFLSESTPMPA 120
           LRLMLKNQITAFNKLLEDQLRIINKEYHPGPSSMPLPNGSNSNLLKQNPCFLSESTPMPA
Sbjct: 61  LRLMLKNQITAFNKLLEDQLRIINKEYHPGPSSMPLPNGSNSNLLKQNPCFLSESTPMPA 120

Query: 121 MPDDVMCNGNSSGIVDRTQSSDQLIYAGKDIQGLHSSMDASNLLPVQNANSVLFGVENGT 180
           MPDDVMCNGNSSGIVDRTQSSDQLIYAGKDIQGLHSSMDASNLLPVQNANSVLFGVENGT
Sbjct: 121 MPDDVMCNGNSSGIVDRTQSSDQLIYAGKDIQGLHSSMDASNLLPVQNANSVLFGVENGT 180

Query: 181 TIKTESGYSSNGNFGFCGNAFLESCQSIGDASGGSFSSSELNGQPXXXXXXXXXXXXFGF 240
           TIKTESGYSSNGNFGFCGNAFLESCQSIGDASGGSFSSSELNGQP            FGF
Sbjct: 181 TIKTESGYSSNGNFGFCGNAFLESCQSIGDASGGSFSSSELNGQPLDDSILDIESSSFGF 240

Query: 241 LSQLPRNFFSDLPEDFSQSTEILDNYGKSPFLPSEQNNFSDSTGGEHTG 289
           LSQLPRNFFSDLPEDFSQSTEILDNYGKSPFLPSEQNNFSDSTGGEHTG
Sbjct: 241 LSQLPRNFFSDLPEDFSQSTEILDNYGKSPFLPSEQNNFSDSTGGEHTG 289



>Os02g0137100 Conserved hypothetical protein 1589, plant family protein
          Length = 329

 Score =  358 bits (919), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 191/292 (65%), Positives = 220/292 (75%), Gaps = 4/292 (1%)

Query: 1   MSGADVDKVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNREFFKAYY 60
           +S  D+  VQNLI  CLQLYM++KEVV+ LS +AKIEPS T+ VWQKLEE NREFFKAYY
Sbjct: 16  VSRQDIQLVQNLIERCLQLYMNQKEVVETLSFQAKIEPSFTELVWQKLEEENREFFKAYY 75

Query: 61  LRLMLKNQITAFNKLLEDQLRIINKEYHPG-PSSMPLPNGSNSNLLKQNPCFLSESTPMP 119
           +RLMLKNQI  FNKLLEDQ R++ KE   G PS  P  NGSN   L QN CFL ++TP  
Sbjct: 76  VRLMLKNQIMVFNKLLEDQYRLMCKEQPSGVPSMPPTTNGSNMGTLNQNACFLPDTTPST 135

Query: 120 AMPDDVMCNGNSSGIVDRTQSSDQLIYAGKDIQGLHSSMDA-SNLLPVQNANSVLFGVEN 178
           AMPD ++ NG+SSGIV+ T SSDQ IYAGK I GL SSMDA S+LL   N+ +  F  +N
Sbjct: 136 AMPDSLLPNGSSSGIVNGTPSSDQFIYAGKVIHGLPSSMDASSSLLAAHNSTAGRFNGDN 195

Query: 179 GTTIKTESGYSSNGNFGFCG-NAFLESCQSIGDASGGSFSSSELNGQPXXXXXXXXXXXX 237
           GTTIKTE+ YS N +FGFC  +AFLE CQSIGDASGGSFSSSELNGQP            
Sbjct: 196 GTTIKTEASYSGNSDFGFCNESAFLEPCQSIGDASGGSFSSSELNGQPLGDPIMDMDSSS 255

Query: 238 FGFLSQLPRNF-FSDLPEDFSQSTEILDNYGKSPFLPSEQNNFSDSTGGEHT 288
           FGFLSQ+PRNF FSDL EDFSQS EIL+NYG+SPF+PSE NNFS+ST G+H 
Sbjct: 256 FGFLSQIPRNFSFSDLTEDFSQSAEILENYGRSPFIPSEPNNFSESTPGDHA 307



>Os01g0220200 Conserved hypothetical protein 1589, plant family protein
          Length = 168

 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 66/96 (68%), Gaps = 3/96 (3%)

Query: 1   MSGADVDKVQNLIHCCLQLYMDKKEVVDALSREAKIEPSVTQHVWQKLEENNREFFKAYY 60
           +S  D++ VQNLI  CLQLYM+K EVV  LS  A+IEP  T  VWQKLEE N EFF+AYY
Sbjct: 23  VSREDIELVQNLIERCLQLYMNKGEVVRTLSTRARIEPGFTTLVWQKLEEENSEFFRAYY 82

Query: 61  LRLMLKNQITAFNKLLEDQLRIINKEYHPGPSSMPL 96
           +RL LK QI  FN LL+ Q  ++    +P P ++PL
Sbjct: 83  IRLKLKRQIILFNHLLQHQYNLMK---YPAPPNVPL 115



>Os05g0212400 Conserved hypothetical protein 1589, plant family protein
          Length = 280

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 58/109 (53%), Gaps = 10/109 (9%)

Query: 21  MDKKEVVDALSREAKIEPSVTQHVWQKLEENNREFFKAYYLRLMLKNQITAFNKLLEDQL 80
           M++ EVV  LS  A+IEP  T  VWQKLEE N EFF+AYY+RL LK QI  FN LLE Q 
Sbjct: 1   MNRGEVVRTLSTRARIEPGFTTLVWQKLEEENSEFFRAYYIRLKLKKQINLFNHLLEHQY 60

Query: 81  RIINKEYHPGPSSMPLPNGSN-------SNLLKQNPCFLSESTPMPAMP 122
            ++    +P P  +PL    N       +NL    P       P P  P
Sbjct: 61  HLMK---YPVPQQVPLTPTQNGIRPMPVNNLPMGYPVLQQPGIPAPVQP 106



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.313    0.131    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,940,043
Number of extensions: 419238
Number of successful extensions: 762
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 758
Number of HSP's successfully gapped: 4
Length of query: 289
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 189
Effective length of database: 11,814,401
Effective search space: 2232921789
Effective search space used: 2232921789
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 155 (64.3 bits)