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Os05g0212400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein 1589, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0167) R2 : 0.768
β1 : -0.792 (0.0613) R2dD : 0.0884 R2D : 0.102
β2 : 1.5 (0.0415) R2dC : 0.666 R2C : 0.676
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0326 (0.0357) R2dN8 : 0.000568 R2N8 : 0.00193
σ : 0.315
deviance : 45.12
__
_____
C
peak time of C : 14.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.73 0.289 10.7 -0.788 0.973 -0.534 -0.0902 0.914 0.0176 15.8 10 203 -- --
39.21 0.292 10.7 -0.785 1.1 -0.401 -1.06 -- 0.0219 15.3 11.75 200 -- --
37.73 0.286 10.7 -0.794 0.985 -0.52 -- 0.95 0.0171 15.8 10 200 -- --
42.55 0.304 10.7 -0.802 0.987 -0.511 -- -- 0.0158 15.7 10 204 -- --
54.18 0.343 10.7 -0.671 -- -0.973 -- 1.68 0.0945 -- 2.63 368 -- --
41.26 0.301 10.7 -0.768 1.5 -- -1.07 -- 0.0387 14.9 -- -- -- --
45.12 0.315 10.7 -0.792 1.5 -- -- -- 0.0326 14.9 -- -- -- --
46.16 0.316 10.7 -0.883 -- -1.3 -- -- -0.0195 -- 2.228 383 -- --
59.39 0.359 10.7 -- 1.03 -0.467 -- -- 0.0984 15.5 10 207 -- --
174.22 0.617 10.7 -0.856 -- -- -- -- -0.00611 -- -- -- -- --
61.66 0.367 10.7 -- 1.51 -- -- -- 0.121 14.9 -- -- -- --
66.42 0.38 10.7 -- -- -1.31 -- -- 0.0676 -- 5.628 372 -- --
193.55 0.649 10.7 -- -- -- -- -- 0.0889 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.90 temperature 15.0 270 > th dose dependent rect. 3 3
2 30.05 temperature 15.0 270 > th dose dependent rect. 2 5
12 30.94 temperature 20.0 270 > th dose independent rect. 4 2
13 31.00 temperature 20.0 270 > th dose independent rect. 3 4
14 31.04 radiation 10.0 270 < th dose independent rect. 3 3
17 31.12 radiation 10.0 270 < th dose independent rect. 2 5
18 31.18 radiation 40.0 270 < th dose dependent rect. 14 16
21 31.29 atmosphere 1015.0 270 < th dose independent rect. 7 19
22 31.30 atmosphere 1015.0 270 < th dose independent rect. 6 21
23 31.31 humidity 80.0 270 > th dose independent rect. 3 3
24 31.31 radiation 10.0 270 < th dose dependent rect. 3 3
30 31.38 humidity 80.0 270 > th dose independent rect. 2 5
32 31.43 atmosphere 1010.0 270 < th dose independent rect. 3 3
38 31.51 precipitation 0.1 270 < th dose independent rect. 3 3
39 31.51 precipitation 0.1 270 < th dose dependent rect. 3 3
41 31.54 wind 9.0 270 < th dose independent rect. 6 21
42 31.56 wind 9.0 270 < th dose independent rect. 3 3
43 31.56 temperature 10.0 270 > th dose independent rect. 3 3
45 31.56 temperature 30.0 270 < th dose independent rect. 3 3
46 31.56 humidity 50.0 270 > th dose independent rect. 3 3
49 31.56 atmosphere 995.0 270 > th dose independent rect. 3 3
54 31.56 temperature 10.0 270 > th dose independent rect. 6 21
55 31.56 humidity 50.0 270 > th dose dependent rect. 3 3
64 31.70 radiation 1.0 270 < th dose independent rect. 3 15
66 31.71 precipitation 0.1 270 < th dose independent rect. 6 21
67 31.71 precipitation 0.1 270 < th dose dependent rect. 6 21
69 31.76 temperature 15.0 30 > th dose dependent rect. 4 5
73 31.83 radiation 30.0 270 < th dose dependent rect. 2 5
87 31.91 humidity 50.0 270 > th dose dependent rect. 2 5
90 31.95 precipitation 0.1 270 < th dose independent rect. 2 5
91 31.95 wind 9.0 270 < th dose independent rect. 7 19
93 31.95 precipitation 0.1 270 < th dose dependent rect. 2 5
94 31.95 temperature 10.0 270 > th dose dependent rect. 18 8
97 31.97 radiation 20.0 270 < th dose independent rect. 15 15
98 31.97 wind 9.0 270 < th dose dependent rect. 3 3
102 31.99 wind 9.0 270 < th dose independent rect. 2 5
103 31.99 temperature 10.0 270 > th dose independent rect. 2 5
105 31.99 temperature 30.0 270 < th dose independent rect. 2 5
106 31.99 humidity 50.0 270 > th dose independent rect. 2 5
108 31.99 atmosphere 995.0 270 > th dose independent rect. 2 5
109 31.99 atmosphere 1015.0 270 < th dose independent rect. 2 5
111 31.99 temperature 10.0 270 > th dose independent rect. 7 19
114 32.04 precipitation 0.1 270 < th dose independent rect. 7 19
115 32.04 temperature 10.0 90 > th dose dependent rect. 20 8
116 32.04 precipitation 0.1 270 < th dose dependent rect. 7 19
128 32.14 radiation 1.0 270 < th dose dependent rect. 3 15
134 32.20 atmosphere 1015.0 30 < th dose independent rect. 9 19
140 32.22 humidity 70.0 30 > th dose independent rect. 4 5
193 32.38 wind 9.0 270 < th dose dependent rect. 2 5
212 32.46 temperature 10.0 270 > th dose dependent rect. 20 6
242 32.60 temperature 10.0 30 > th dose dependent rect. 9 19
309 32.74 humidity 50.0 270 > th dose independent rect. 15 15
320 32.76 precipitation 0.1 270 < th dose independent rect. 6 9
324 32.76 precipitation 0.1 270 < th dose dependent rect. 6 9
328 32.78 atmosphere 995.0 270 > th dose independent rect. 6 9
331 32.79 temperature 10.0 1440 > th dose independent rect. 5 5
334 32.79 atmosphere 995.0 1440 > th dose independent rect. 5 5
335 32.79 atmosphere 1015.0 1440 < th dose independent rect. 5 5
337 32.79 temperature 10.0 1440 > th dose independent rect. 10 19
342 32.80 temperature 10.0 270 > th dose independent rect. 6 9
343 32.80 atmosphere 1015.0 270 < th dose independent rect. 6 9
344 32.80 temperature 10.0 270 > th dose independent rect. 15 15
351 32.82 wind 9.0 30 < th dose independent rect. 4 5
352 32.82 temperature 10.0 30 > th dose independent rect. 4 5
354 32.82 temperature 30.0 30 < th dose independent rect. 4 5
355 32.82 humidity 50.0 30 > th dose independent rect. 4 5
357 32.82 atmosphere 995.0 30 > th dose independent rect. 4 5
358 32.82 atmosphere 1015.0 30 < th dose independent rect. 4 5
359 32.82 temperature 10.0 30 > th dose independent rect. 9 19
363 32.83 wind 1.0 270 > th dose independent rect. 3 3
365 32.83 precipitation 0.1 30 < th dose independent rect. 4 5
372 32.83 precipitation 0.1 30 < th dose dependent rect. 4 5
381 32.87 temperature 25.0 270 < th dose independent rect. 14 16
396 32.90 wind 1.0 270 > th dose independent rect. 7 19
401 32.91 atmosphere 995.0 270 > th dose independent rect. 7 19
425 32.95 wind 9.0 30 < th dose independent rect. 9 19
426 32.95 atmosphere 995.0 270 > th dose independent rect. 6 21
439 32.99 wind 3.0 90 < th dose independent rect. 4 5
443 32.99 humidity 70.0 30 > th dose independent rect. 15 18
456 33.02 precipitation 0.1 270 < th dose independent rect. 15 15
459 33.02 precipitation 0.1 270 < th dose dependent rect. 15 15
467 33.04 wind 7.0 270 < th dose independent rect. 16 10
468 33.04 wind 1.0 270 > th dose independent rect. 6 21
529 33.08 radiation 40.0 10 < th dose dependent rect. 5 4
547 33.10 atmosphere 995.0 270 > th dose independent rect. 15 15
549 33.10 precipitation 0.1 30 < th dose independent rect. 9 19
551 33.10 precipitation 0.1 30 < th dose dependent rect. 9 19
560 33.13 wind 3.0 10 < th dose independent rect. 5 4
562 33.13 wind 9.0 270 < th dose independent rect. 6 9
580 33.16 humidity 50.0 270 > th dose independent rect. 6 9
585 33.17 atmosphere 995.0 30 > th dose independent rect. 9 19
593 33.19 wind 9.0 270 < th dose independent rect. 15 15
622 33.23 humidity 50.0 270 > th dose independent rect. 2 16
674 33.31 radiation 20.0 10 < th dose independent rect. 17 16
676 33.31 atmosphere 995.0 270 > th dose dependent rect. 3 3
734 33.38 wind 1.0 270 > th dose independent rect. 6 9
787 33.43 temperature 30.0 270 < th dose independent rect. 7 6
800 33.45 precipitation 0.1 10 < th dose independent rect. 15 18
805 33.45 precipitation 0.1 10 < th dose dependent rect. 15 18
830 33.48 atmosphere 1015.0 270 < th dose dependent rect. 3 3
834 33.49 temperature 10.0 10 > th dose independent rect. 9 6
836 33.49 atmosphere 995.0 10 > th dose independent rect. 9 6
837 33.49 atmosphere 1015.0 10 < th dose independent rect. 9 6
838 33.49 precipitation 0.1 10 < th dose independent rect. 9 6
841 33.49 temperature 10.0 10 > th dose independent rect. 15 18
847 33.49 precipitation 0.1 10 < th dose dependent rect. 9 6
862 33.51 temperature 30.0 10 < th dose independent rect. 17 16
891 33.54 wind 9.0 30 < th dose independent rect. 15 18
895 33.55 temperature 10.0 1440 > th dose independent rect. 10 6
899 33.55 atmosphere 1015.0 90 < th dose independent rect. 20 8
903 33.55 temperature 10.0 1440 > th dose independent rect. 16 18
915 33.56 atmosphere 1015.0 270 < th dose independent rect. 21 14
935 33.59 radiation 1.0 10 > th dose independent rect. 9 6
937 33.59 atmosphere 1015.0 270 < th dose independent rect. 18 8
957 33.61 temperature 30.0 10 < th dose independent rect. 15 18