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Os01g0220200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein 1589, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0262) R2 : 0.756
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.27 (0.0653) R2dC : 0.652 R2C : 0.65
β3 : -1.04 (0.0764) R2dE : 0.121 R2E : 0.0853
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.205 (0.0593) R2dN8 : 0.01 R2N8 : -0.0207
σ : 0.48
deviance : 106.26
__
_____
C
peak time of C : 8.03
E
wheather : temperature
threshold : 21.1
memory length : 8351
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.76 0.485 12.1 0.25 2.26 -1.08 -0.119 1.38 0.0948 8.03 22.77 5509 -- --
106.43 0.48 12.1 0.0434 2.28 -1.05 -0.189 -- 0.204 8.04 20.85 8272 -- --
106.77 0.481 12.1 0.263 2.27 -1.08 -- 1.38 0.109 8.04 22.58 5551 -- --
106.19 0.48 12.1 -0.0666 2.27 -1.01 -- -- 0.188 8.04 21.37 8361 -- --
246.62 0.731 12.1 0.784 -- -2.87 -- 4.19 0.311 -- 23.82 626 -- --
140.33 0.555 12.2 -0.58 2.28 -- -0.0402 -- -0.2 8.17 -- -- -- --
140.34 0.555 12.2 -0.581 2.28 -- -- -- -0.2 8.17 -- -- -- --
258.9 0.749 12.2 -0.0641 -- -2.42 -- -- 0.087 -- 24.04 639 -- --
106.26 0.48 12.1 -- 2.27 -1.04 -- -- 0.205 8.03 21.1 8351 -- --
425.99 0.964 12.2 -0.563 -- -- -- -- -0.173 -- -- -- -- --
149.23 0.571 12.2 -- 2.27 -- -- -- -0.135 8.19 -- -- -- --
258.97 0.75 12.2 -- -- -2.44 -- -- 0.098 -- 24 639 -- --
434.34 0.973 12.2 -- -- -- -- -- -0.111 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.41 radiation 30.0 90 < th dose dependent rect. 23 20
2 98.55 radiation 10.0 10 < th dose independent rect. 23 21
3 98.87 radiation 1.0 270 < th dose independent sin 16 NA
4 98.92 radiation 1.0 270 > th dose independent sin 16 NA
6 99.01 radiation 1.0 270 < th dose dependent sin 16 NA
9 99.27 temperature 10.0 270 > th dose dependent rect. 13 17
12 99.73 radiation 30.0 10 < th dose dependent rect. 23 21
21 100.35 radiation 10.0 90 < th dose independent rect. 23 20
32 101.21 radiation 40.0 10 < th dose dependent rect. 12 8
35 101.38 radiation 40.0 90 < th dose dependent rect. 13 6
37 101.48 radiation 1.0 270 > th dose independent rect. 13 17
40 101.56 radiation 1.0 270 > th dose independent rect. 13 6
55 101.98 temperature 10.0 270 > th dose dependent rect. 22 10
59 102.29 radiation 10.0 10 < th dose independent rect. 2 18
61 102.39 radiation 1.0 270 > th dose independent rect. 15 2
66 102.51 temperature 10.0 270 > th dose dependent rect. 22 21
69 102.59 precipitation 0.1 270 < th dose independent rect. 22 9
70 102.59 precipitation 0.1 270 < th dose dependent rect. 22 9
75 102.74 temperature 10.0 270 > th dose dependent rect. 15 2
90 102.87 radiation 30.0 90 < th dose dependent rect. 1 18
91 102.91 radiation 30.0 90 < th dose independent rect. 13 6
104 103.27 temperature 10.0 270 > th dose dependent rect. 13 5
105 103.32 temperature 10.0 270 > th dose dependent rect. 2 16
107 103.35 radiation 10.0 1440 < th dose dependent rect. 18 7
113 103.44 wind 9.0 270 < th dose independent rect. 7 15
117 103.46 humidity 90.0 14400 < th dose independent rect. 17 8
124 103.52 radiation 20.0 90 < th dose independent rect. 1 18
126 103.55 temperature 10.0 270 > th dose dependent rect. 23 19
128 103.62 radiation 30.0 10 < th dose dependent rect. 2 18
133 103.64 radiation 10.0 10 < th dose independent rect. 10 10
141 103.72 wind 1.0 270 > th dose independent rect. 13 5
156 103.87 radiation 30.0 10 < th dose independent rect. 12 8
157 103.88 temperature 20.0 270 > th dose independent rect. 13 5
158 103.88 precipitation 0.1 270 < th dose independent rect. 13 17
159 103.88 precipitation 0.1 270 < th dose dependent rect. 13 17
162 103.92 humidity 90.0 270 < th dose independent rect. 15 2
163 103.93 radiation 1.0 720 < th dose dependent sin 12 NA
167 103.96 humidity 90.0 14400 < th dose independent rect. 10 16
168 103.96 wind 9.0 270 < th dose independent rect. 17 22
183 104.08 temperature 20.0 270 > th dose independent rect. 15 2
187 104.11 humidity 90.0 14400 < th dose independent sin 17 NA
199 104.20 radiation 20.0 270 < th dose independent rect. 22 9
202 104.22 humidity 60.0 270 > th dose dependent rect. 18 4
207 104.23 temperature 30.0 270 < th dose independent rect. 18 19
209 104.26 humidity 70.0 270 > th dose independent rect. 22 9
212 104.30 radiation 1.0 1440 < th dose dependent rect. 18 1
215 104.33 wind 7.0 270 < th dose independent rect. 22 9
221 104.37 temperature 10.0 270 > th dose independent rect. 22 9
222 104.37 temperature 30.0 270 < th dose independent rect. 22 9
223 104.37 humidity 50.0 270 > th dose independent rect. 22 9
225 104.37 atmosphere 995.0 270 > th dose independent rect. 22 9
227 104.37 temperature 10.0 270 > th dose independent rect. 7 15
242 104.50 precipitation 0.1 270 < th dose independent rect. 15 2
245 104.50 precipitation 0.1 270 < th dose dependent rect. 15 2
255 104.65 radiation 20.0 10 < th dose dependent rect. 8 12
264 104.73 humidity 90.0 14400 > th dose dependent rect. 21 4
270 104.80 radiation 1.0 720 < th dose dependent rect. 16 15
271 104.81 humidity 90.0 14400 < th dose independent rect. 21 2
272 104.81 humidity 50.0 270 > th dose dependent rect. 17 6
282 104.90 humidity 60.0 270 > th dose independent rect. 17 9
290 104.92 radiation 1.0 270 < th dose dependent rect. 5 21
291 104.94 temperature 30.0 270 < th dose independent rect. 17 9
295 104.97 radiation 40.0 270 < th dose independent rect. 15 2
300 104.99 wind 9.0 270 < th dose independent rect. 18 19
304 105.02 radiation 1.0 270 < th dose independent rect. 5 21
306 105.04 radiation 10.0 10 < th dose independent rect. 8 12
310 105.06 wind 1.0 270 > th dose independent rect. 15 2
324 105.15 humidity 90.0 14400 < th dose independent rect. 20 4
333 105.17 temperature 10.0 270 > th dose independent rect. 15 2
335 105.17 atmosphere 1010.0 270 < th dose independent rect. 15 2
337 105.17 temperature 10.0 270 > th dose independent rect. 17 22
338 105.18 humidity 90.0 270 < th dose independent rect. 13 5
341 105.20 temperature 10.0 270 > th dose independent rect. 13 5
343 105.20 atmosphere 1010.0 270 < th dose independent rect. 13 5
346 105.20 temperature 10.0 270 > th dose independent rect. 18 19
359 105.32 radiation 1.0 14400 > th dose independent rect. 18 11
366 105.36 humidity 50.0 270 > th dose independent rect. 7 15
369 105.38 precipitation 0.1 270 < th dose independent rect. 13 5
371 105.38 precipitation 0.1 270 < th dose dependent rect. 13 5
379 105.44 radiation 1.0 270 > th dose independent rect. 10 21
381 105.45 radiation 40.0 90 < th dose dependent rect. 15 4
383 105.48 wind 1.0 270 > th dose dependent rect. 13 5
389 105.51 radiation 1.0 14400 > th dose independent rect. 18 1
400 105.52 atmosphere 995.0 270 > th dose independent rect. 18 19
407 105.56 humidity 90.0 14400 > th dose dependent rect. 22 1
409 105.57 radiation 1.0 270 < th dose independent rect. 16 10
417 105.60 radiation 40.0 270 < th dose dependent rect. 22 10
427 105.70 humidity 90.0 14400 > th dose independent rect. 10 17
430 105.71 humidity 90.0 14400 > th dose independent rect. 14 13
436 105.74 radiation 40.0 90 < th dose independent rect. 15 4
437 105.76 temperature 30.0 270 < th dose independent rect. 7 16
439 105.77 humidity 90.0 14400 > th dose independent rect. 17 10
444 105.78 temperature 10.0 14400 > th dose dependent rect. 17 1
454 105.82 radiation 1.0 720 < th dose independent sin 12 NA
457 105.82 temperature 25.0 14400 < th dose dependent rect. 14 1
462 105.83 temperature 25.0 14400 < th dose dependent rect. 14 5
466 105.85 atmosphere 1015.0 270 < th dose independent rect. 7 15
470 105.86 atmosphere 995.0 270 > th dose independent rect. 13 5
473 105.86 humidity 90.0 14400 > th dose dependent sin 16 NA
474 105.86 temperature 25.0 14400 < th dose dependent rect. 14 3
475 105.86 humidity 50.0 270 > th dose dependent rect. 17 8
521 105.97 temperature 25.0 14400 < th dose dependent rect. 16 1
526 105.99 atmosphere 995.0 270 > th dose independent rect. 15 2
544 106.06 humidity 80.0 14400 > th dose dependent rect. 18 1
547 106.06 humidity 50.0 270 > th dose dependent rect. 7 16
559 106.10 wind 9.0 270 < th dose dependent rect. 22 9
565 106.13 humidity 90.0 14400 > th dose independent sin 16 NA
580 106.16 radiation 1.0 720 < th dose independent rect. 16 15
588 106.19 temperature 10.0 10 > th dose dependent rect. 16 17
605 106.27 radiation 1.0 270 < th dose dependent rect. 16 10
606 106.28 wind 3.0 43200 < th dose independent rect. 2 2
607 106.28 temperature 25.0 14400 > th dose independent rect. 13 2
617 106.30 radiation 40.0 10 < th dose dependent rect. 13 20
620 106.31 wind 3.0 43200 > th dose independent rect. 2 2
639 106.35 humidity 90.0 14400 < th dose independent rect. 18 1
642 106.35 radiation 1.0 270 < th dose dependent rect. 16 7
645 106.36 humidity 90.0 14400 > th dose independent rect. 21 3
651 106.38 humidity 90.0 14400 > th dose independent rect. 22 1
663 106.42 temperature 25.0 14400 < th dose independent rect. 14 1
694 106.48 temperature 25.0 14400 > th dose independent rect. 11 5
697 106.49 humidity 70.0 270 > th dose independent rect. 18 4
715 106.52 temperature 25.0 14400 < th dose independent rect. 11 5
743 106.55 radiation 1.0 14400 < th dose independent rect. 18 11
779 106.61 radiation 1.0 14400 < th dose independent rect. 18 7
806 106.65 radiation 10.0 90 > th dose independent rect. 9 6
811 106.66 wind 9.0 270 < th dose independent rect. 15 2
840 106.71 wind 9.0 270 < th dose independent rect. 13 5
849 106.73 temperature 10.0 270 > th dose independent rect. 6 7
850 106.73 atmosphere 995.0 270 > th dose independent rect. 6 7
851 106.73 atmosphere 1015.0 270 < th dose independent rect. 6 7
852 106.73 temperature 10.0 270 > th dose independent rect. 13 17
859 106.74 radiation 30.0 14400 > th dose independent rect. 16 16
882 106.78 radiation 1.0 14400 < th dose independent rect. 18 1
888 106.78 humidity 70.0 14400 < th dose dependent rect. 17 2
895 106.80 radiation 10.0 10 > th dose independent rect. 9 7
896 106.80 wind 3.0 43200 > th dose dependent rect. 5 2
901 106.81 temperature 25.0 14400 < th dose independent rect. 11 1
909 106.82 radiation 1.0 270 < th dose independent rect. 16 7
910 106.82 precipitation 0.1 270 < th dose independent rect. 6 7
911 106.82 precipitation 0.1 270 < th dose dependent rect. 6 7
923 106.85 temperature 30.0 270 < th dose independent rect. 18 4
926 106.85 humidity 70.0 14400 < th dose dependent rect. 17 14
974 106.91 wind 9.0 270 < th dose independent rect. 6 7